RNA–Protein interactions for RNA: ENST00000445181.5

C9orf3-207, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 873 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-207ENST00000445181 SSSCA1O60232 199 aa18.06■□□□□ 0.48
C9orf3-207ENST00000445181 OR10J1P30954 320 aa18.06■□□□□ 0.48
C9orf3-207ENST00000445181 POLR2GP62487 172 aaKnown RBP eCLIP18.06■□□□□ 0.48
C9orf3-207ENST00000445181 ID3Q02535 119 aa18.06■□□□□ 0.48
C9orf3-207ENST00000445181 TIGITQ495A1 244 aa18.06■□□□□ 0.48
C9orf3-207ENST00000445181 SPANXN5Q5MJ07 72 aa18.06■□□□□ 0.48
C9orf3-207ENST00000445181 TOMM20LQ6UXN7 152 aa18.06■□□□□ 0.48
C9orf3-207ENST00000445181 TMEM61Q8N0U2 210 aa18.06■□□□□ 0.48
C9orf3-207ENST00000445181 TMEM116Q8NCL8 245 aa18.06■□□□□ 0.48
C9orf3-207ENST00000445181 TRAV14DV4A0A0A6YYC5 116 aa18.05■□□□□ 0.48
C9orf3-207ENST00000445181 C5orf51A6NDU8 294 aa18.05■□□□□ 0.48
C9orf3-207ENST00000445181 SCAF4O95104 1147 aaKnown RBP18.05■□□□□ 0.48
C9orf3-207ENST00000445181 OR1S2Q8NGQ3 325 aa18.05■□□□□ 0.48
C9orf3-207ENST00000445181 NPIPB3Q92617 1050 aa18.05■□□□□ 0.48
C9orf3-207ENST00000445181 ZNF414Q96IQ9 312 aa18.05■□□□□ 0.48
C9orf3-207ENST00000445181 ASCL2Q99929 193 aa18.05■□□□□ 0.48
C9orf3-207ENST00000445181 GPN1Q9HCN4 374 aaPredicted RBP18.05■□□□□ 0.48
C9orf3-207ENST00000445181 ZNF785A8K8V0 405 aa18.04■□□□□ 0.48
C9orf3-207ENST00000445181 H3BP45 60 aa18.04■□□□□ 0.48
C9orf3-207ENST00000445181 IL5P05113 134 aa18.04■□□□□ 0.48
C9orf3-207ENST00000445181 GPX4P36969 197 aaPredicted RBP18.04■□□□□ 0.48
C9orf3-207ENST00000445181 SLC35E1Q96K37 410 aa18.04■□□□□ 0.48
C9orf3-207ENST00000445181 STRAPQ9Y3F4 350 aaKnown RBP18.04■□□□□ 0.48
C9orf3-207ENST00000445181 IGHV3-49A0A0A0MS15 119 aa18.03■□□□□ 0.48
C9orf3-207ENST00000445181 IGHV7-4-1A0A0J9YVY3 117 aa18.03■□□□□ 0.48
C9orf3-207ENST00000445181 IGKV1-17P01599 117 aa18.03■□□□□ 0.48
C9orf3-207ENST00000445181 IGLC1P0CG04 106 aa18.03■□□□□ 0.48
C9orf3-207ENST00000445181 CD81P60033 236 aa18.03■□□□□ 0.48
C9orf3-207ENST00000445181 LAMTOR1Q6IAA8 161 aa18.03■□□□□ 0.48
C9orf3-207ENST00000445181 WWC2-AS2Q96NR7 200 aa18.03■□□□□ 0.48
C9orf3-207ENST00000445181 PSENENQ9NZ42 101 aa18.03■□□□□ 0.48
C9orf3-207ENST00000445181 SMPXQ9UHP9 88 aa18.03■□□□□ 0.48
C9orf3-207ENST00000445181 U3KQK5 164 aa18.03■□□□□ 0.48
C9orf3-207ENST00000445181 TRAV25A0A0B4J276 109 aa18.02■□□□□ 0.48
C9orf3-207ENST00000445181 INMT-MINDY4F8WBC2 141 aa18.02■□□□□ 0.48
C9orf3-207ENST00000445181 Q8N1Y9 231 aa18.02■□□□□ 0.48
C9orf3-207ENST00000445181 Q8WTZ3 238 aa18.02■□□□□ 0.48
C9orf3-207ENST00000445181 RHPN1-AS1Q9BWJ2 59 aa18.02■□□□□ 0.48
C9orf3-207ENST00000445181 ZFAND3Q9H8U3 227 aa18.02■□□□□ 0.48
C9orf3-207ENST00000445181 IGHV3OR16-13A0A075B7E8 117 aa18.01■□□□□ 0.47
C9orf3-207ENST00000445181 IGHV3-74A0A0B4J1X5 117 aa18.01■□□□□ 0.47
C9orf3-207ENST00000445181 BMI1P35226 326 aa18.01■□□□□ 0.47
C9orf3-207ENST00000445181 GAMTQ14353 236 aa18.01■□□□□ 0.47
C9orf3-207ENST00000445181 NEURL2Q9BR09 285 aa18.01■□□□□ 0.47
C9orf3-207ENST00000445181 CHEK1O14757 476 aa18■□□□□ 0.47
C9orf3-207ENST00000445181 PRAF2O60831 178 aa18■□□□□ 0.47
C9orf3-207ENST00000445181 YPEL3P61236 119 aaPredicted RBP18■□□□□ 0.47
C9orf3-207ENST00000445181 GSG1LQ6UXU4 331 aa18■□□□□ 0.47
C9orf3-207ENST00000445181 SMIM8Q96KF7 97 aa18■□□□□ 0.47
C9orf3-207ENST00000445181 RAB40CQ96S21 281 aa18■□□□□ 0.47
C9orf3-207ENST00000445181 ZFP92A6NM28 416 aa17.99■□□□□ 0.47
C9orf3-207ENST00000445181 MBPP02686 304 aaPredicted RBP17.99■□□□□ 0.47
C9orf3-207ENST00000445181 IGHV4-30-4P0DP06 118 aa17.99■□□□□ 0.47
C9orf3-207ENST00000445181 NPPCP23582 126 aa17.99■□□□□ 0.47
C9orf3-207ENST00000445181 METTL26Q96S19 204 aa17.99■□□□□ 0.47
C9orf3-207ENST00000445181 CD7P09564 240 aa17.98■□□□□ 0.47
C9orf3-207ENST00000445181 FRMD6-AS1P0C7T7 363 aa17.98■□□□□ 0.47
C9orf3-207ENST00000445181 RD3LP0DJH9 198 aa17.98■□□□□ 0.47
C9orf3-207ENST00000445181 NARS2Q96I59 477 aaKnown RBP17.98■□□□□ 0.47
C9orf3-207ENST00000445181 C2orf50Q96LR7 162 aa17.98■□□□□ 0.47
C9orf3-207ENST00000445181 RNF2Q99496 336 aa17.98■□□□□ 0.47
C9orf3-207ENST00000445181 MARVELD1Q9BSK0 173 aa17.98■□□□□ 0.47
C9orf3-207ENST00000445181 TUBA4BQ9H853 241 aa17.98■□□□□ 0.47
C9orf3-207ENST00000445181 LSM5Q9Y4Y9 91 aaKnown RBP17.98■□□□□ 0.47
C9orf3-207ENST00000445181 IGHV3-66A0A0C4DH42 116 aa17.97■□□□□ 0.47
C9orf3-207ENST00000445181 SNRPGP15A8MWD9 76 aa17.97■□□□□ 0.47
C9orf3-207ENST00000445181 L7N2F9 121 aa17.97■□□□□ 0.47
C9orf3-207ENST00000445181 TSPAN4O14817 238 aa17.97■□□□□ 0.47
C9orf3-207ENST00000445181 VAMP2P63027 116 aa17.97■□□□□ 0.47
C9orf3-207ENST00000445181 OR8G2PQ6IF36 304 aa17.97■□□□□ 0.47
C9orf3-207ENST00000445181 ST8SIA2Q92186 375 aa17.97■□□□□ 0.47
C9orf3-207ENST00000445181 SPAG8Q99932 426 aaPredicted RBP17.97■□□□□ 0.47
C9orf3-207ENST00000445181 RCL1Q9Y2P8 373 aaKnown RBP17.97■□□□□ 0.47
C9orf3-207ENST00000445181 TOMM40O96008 361 aa17.96■□□□□ 0.47
C9orf3-207ENST00000445181 APOHP02749 345 aaPredicted RBP17.96■□□□□ 0.47
C9orf3-207ENST00000445181 IL4P05112 153 aa17.96■□□□□ 0.47
C9orf3-207ENST00000445181 SBSPONQ8IVN8 264 aa17.96■□□□□ 0.47
C9orf3-207ENST00000445181 TMEM231Q9H6L2 316 aa17.96■□□□□ 0.47
C9orf3-207ENST00000445181 A0A1W2PS18 150 aa17.95■□□□□ 0.46
C9orf3-207ENST00000445181 TSC22D2O75157 780 aa17.95■□□□□ 0.46
C9orf3-207ENST00000445181 FABP1P07148 127 aa17.95■□□□□ 0.46
C9orf3-207ENST00000445181 PAX9P55771 341 aa17.95■□□□□ 0.46
C9orf3-207ENST00000445181 TAS2R30P59541 319 aa17.95■□□□□ 0.46
C9orf3-207ENST00000445181 S100A10P60903 97 aa17.95■□□□□ 0.46
C9orf3-207ENST00000445181 IGKV3-7A0A075B6H7 116 aa17.94■□□□□ 0.46
C9orf3-207ENST00000445181 SMCO3A2RU48 225 aa17.94■□□□□ 0.46
C9orf3-207ENST00000445181 OR11H12B2RN74 326 aa17.94■□□□□ 0.46
C9orf3-207ENST00000445181 PRSS46E5RG02 174 aa17.94■□□□□ 0.46
C9orf3-207ENST00000445181 K7EPK0 472 aa17.94■□□□□ 0.46
C9orf3-207ENST00000445181 GOSR2O14653 212 aa17.94■□□□□ 0.46
C9orf3-207ENST00000445181 METTL15P1P0C7V9 234 aa17.94■□□□□ 0.46
C9orf3-207ENST00000445181 PSG1P11464 419 aa17.94■□□□□ 0.46
C9orf3-207ENST00000445181 AKR1C1Q04828 323 aa17.94■□□□□ 0.46
C9orf3-207ENST00000445181 ACOT7LQ6ZUV0 252 aa17.94■□□□□ 0.46
C9orf3-207ENST00000445181 TCF24Q7RTU0 167 aa17.94■□□□□ 0.46
C9orf3-207ENST00000445181 DEFB125Q8N687 156 aa17.94■□□□□ 0.46
C9orf3-207ENST00000445181 VSIRQ9H7M9 311 aa17.94■□□□□ 0.46
C9orf3-207ENST00000445181 C7orf66A4D0T2 115 aa17.93■□□□□ 0.46
C9orf3-207ENST00000445181 OR4C46A6NHA9 309 aa17.93■□□□□ 0.46
C9orf3-207ENST00000445181 CD5P06127 495 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms