RNA–Protein interactions for RNA: ENST00000444508.5

SMARCAL1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 2

Gene SMARCAL1, Length 711 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-209ENST00000444508 RBPMS2Q6ZRY4 209 aaKnown RBP13.18□□□□□ -0.3
SMARCAL1-209ENST00000444508 SLC35E1Q96K37 410 aa13.18□□□□□ -0.3
SMARCAL1-209ENST00000444508 PUS1Q9Y606 427 aaKnown RBP eCLIP13.18□□□□□ -0.3
SMARCAL1-209ENST00000444508 SELENOKQ9Y6D0 94 aa13.18□□□□□ -0.3
SMARCAL1-209ENST00000444508 TRAV14DV4A0A0A6YYC5 116 aa13.17□□□□□ -0.3
SMARCAL1-209ENST00000444508 C5orf51A6NDU8 294 aa13.17□□□□□ -0.3
SMARCAL1-209ENST00000444508 INMT-MINDY4F8WBC2 141 aa13.17□□□□□ -0.3
SMARCAL1-209ENST00000444508 CCSO14618 274 aa13.17□□□□□ -0.3
SMARCAL1-209ENST00000444508 SSSCA1O60232 199 aa13.17□□□□□ -0.3
SMARCAL1-209ENST00000444508 PRAF2O60831 178 aa13.17□□□□□ -0.3
SMARCAL1-209ENST00000444508 TIGITQ495A1 244 aa13.17□□□□□ -0.3
SMARCAL1-209ENST00000444508 SPANXN5Q5MJ07 72 aa13.17□□□□□ -0.3
SMARCAL1-209ENST00000444508 TMEM61Q8N0U2 210 aa13.17□□□□□ -0.3
SMARCAL1-209ENST00000444508 NPIPB3Q92617 1050 aa13.17□□□□□ -0.3
SMARCAL1-209ENST00000444508 WDR89Q96FK6 387 aaPredicted RBP13.17□□□□□ -0.3
SMARCAL1-209ENST00000444508 ZNF414Q96IQ9 312 aa13.17□□□□□ -0.3
SMARCAL1-209ENST00000444508 STRAPQ9Y3F4 350 aaKnown RBP13.17□□□□□ -0.3
SMARCAL1-209ENST00000444508 TRAV25A0A0B4J276 109 aa13.16□□□□□ -0.3
SMARCAL1-209ENST00000444508 IGHV7-4-1A0A0J9YVY3 117 aa13.16□□□□□ -0.3
SMARCAL1-209ENST00000444508 H3BP45 60 aa13.16□□□□□ -0.3
SMARCAL1-209ENST00000444508 IGKV1-17P01599 117 aa13.16□□□□□ -0.3
SMARCAL1-209ENST00000444508 IGLC1P0CG04 106 aa13.16□□□□□ -0.3
SMARCAL1-209ENST00000444508 BMI1P35226 326 aa13.16□□□□□ -0.3
SMARCAL1-209ENST00000444508 LAMTOR1Q6IAA8 161 aa13.16□□□□□ -0.3
SMARCAL1-209ENST00000444508 B9D2Q9BPU9 175 aa13.16□□□□□ -0.3
SMARCAL1-209ENST00000444508 PSENENQ9NZ42 101 aa13.16□□□□□ -0.3
SMARCAL1-209ENST00000444508 SMPXQ9UHP9 88 aa13.16□□□□□ -0.3
SMARCAL1-209ENST00000444508 ZNF785A8K8V0 405 aa13.15□□□□□ -0.3
SMARCAL1-209ENST00000444508 SCAF4O95104 1147 aaKnown RBP13.15□□□□□ -0.3
SMARCAL1-209ENST00000444508 Q8WTZ3 238 aa13.15□□□□□ -0.3
SMARCAL1-209ENST00000444508 SMIM8Q96KF7 97 aa13.15□□□□□ -0.3
SMARCAL1-209ENST00000444508 RAB40CQ96S21 281 aa13.15□□□□□ -0.3
SMARCAL1-209ENST00000444508 RHPN1-AS1Q9BWJ2 59 aa13.15□□□□□ -0.3
SMARCAL1-209ENST00000444508 ZFAND3Q9H8U3 227 aa13.15□□□□□ -0.3
SMARCAL1-209ENST00000444508 SNRPGP15A8MWD9 76 aa13.14□□□□□ -0.31
SMARCAL1-209ENST00000444508 CD81P60033 236 aa13.14□□□□□ -0.31
SMARCAL1-209ENST00000444508 YPEL3P61236 119 aaPredicted RBP13.14□□□□□ -0.31
SMARCAL1-209ENST00000444508 GAMTQ14353 236 aa13.14□□□□□ -0.31
SMARCAL1-209ENST00000444508 GSG1LQ6UXU4 331 aa13.14□□□□□ -0.31
SMARCAL1-209ENST00000444508 Q8N1Y9 231 aa13.14□□□□□ -0.31
SMARCAL1-209ENST00000444508 C2orf50Q96LR7 162 aa13.14□□□□□ -0.31
SMARCAL1-209ENST00000444508 MARVELD1Q9BSK0 173 aa13.14□□□□□ -0.31
SMARCAL1-209ENST00000444508 IGHV3-49A0A0A0MS15 119 aa13.13□□□□□ -0.31
SMARCAL1-209ENST00000444508 ZFP92A6NM28 416 aa13.13□□□□□ -0.31
SMARCAL1-209ENST00000444508 CHEK1O14757 476 aa13.13□□□□□ -0.31
SMARCAL1-209ENST00000444508 MBPP02686 304 aaPredicted RBP13.13□□□□□ -0.31
SMARCAL1-209ENST00000444508 METTL26Q96S19 204 aa13.13□□□□□ -0.31
SMARCAL1-209ENST00000444508 NEURL2Q9BR09 285 aa13.13□□□□□ -0.31
SMARCAL1-209ENST00000444508 RCL1Q9Y2P8 373 aaKnown RBP13.13□□□□□ -0.31
SMARCAL1-209ENST00000444508 IGHV3OR16-13A0A075B7E8 117 aa13.12□□□□□ -0.31
SMARCAL1-209ENST00000444508 IGHV3-74A0A0B4J1X5 117 aa13.12□□□□□ -0.31
SMARCAL1-209ENST00000444508 L7N2F9 121 aa13.12□□□□□ -0.31
SMARCAL1-209ENST00000444508 TSPAN4O14817 238 aa13.12□□□□□ -0.31
SMARCAL1-209ENST00000444508 FABP1P07148 127 aa13.12□□□□□ -0.31
SMARCAL1-209ENST00000444508 RD3LP0DJH9 198 aa13.12□□□□□ -0.31
SMARCAL1-209ENST00000444508 NPPCP23582 126 aa13.12□□□□□ -0.31
SMARCAL1-209ENST00000444508 TAS2R30P59541 319 aa13.12□□□□□ -0.31
SMARCAL1-209ENST00000444508 VAMP2P63027 116 aa13.12□□□□□ -0.31
SMARCAL1-209ENST00000444508 NARS2Q96I59 477 aaKnown RBP13.12□□□□□ -0.31
SMARCAL1-209ENST00000444508 RNF2Q99496 336 aa13.12□□□□□ -0.31
SMARCAL1-209ENST00000444508 SPAG8Q99932 426 aaPredicted RBP13.12□□□□□ -0.31
SMARCAL1-209ENST00000444508 TMEM231Q9H6L2 316 aa13.12□□□□□ -0.31
SMARCAL1-209ENST00000444508 LSM5Q9Y4Y9 91 aaKnown RBP13.12□□□□□ -0.31
SMARCAL1-209ENST00000444508 A0A1W2PS18 150 aa13.11□□□□□ -0.31
SMARCAL1-209ENST00000444508 TSC22D2O75157 780 aa13.11□□□□□ -0.31
SMARCAL1-209ENST00000444508 TOMM40O96008 361 aa13.11□□□□□ -0.31
SMARCAL1-209ENST00000444508 IGHV4-30-4P0DP06 118 aa13.11□□□□□ -0.31
SMARCAL1-209ENST00000444508 OR8G2PQ6IF36 304 aa13.11□□□□□ -0.31
SMARCAL1-209ENST00000444508 TUBA4BQ9H853 241 aa13.11□□□□□ -0.31
SMARCAL1-209ENST00000444508 DNAH9Q9NYC9 4486 aa13.1□□□□□ -0.31
SMARCAL1-209ENST00000444508 PRSS46E5RG02 174 aa13.1□□□□□ -0.31
SMARCAL1-209ENST00000444508 IL4P05112 153 aa13.1□□□□□ -0.31
SMARCAL1-209ENST00000444508 CD5P06127 495 aa13.1□□□□□ -0.31
SMARCAL1-209ENST00000444508 CD7P09564 240 aa13.1□□□□□ -0.31
SMARCAL1-209ENST00000444508 FRMD6-AS1P0C7T7 363 aa13.1□□□□□ -0.31
SMARCAL1-209ENST00000444508 PAX9P55771 341 aa13.1□□□□□ -0.31
SMARCAL1-209ENST00000444508 S100A10P60903 97 aa13.1□□□□□ -0.31
SMARCAL1-209ENST00000444508 AKR1C1Q04828 323 aa13.1□□□□□ -0.31
SMARCAL1-209ENST00000444508 ST8SIA2Q92186 375 aa13.1□□□□□ -0.31
SMARCAL1-209ENST00000444508 VSIRQ9H7M9 311 aa13.1□□□□□ -0.31
SMARCAL1-209ENST00000444508 IGHV3-66A0A0C4DH42 116 aa13.09□□□□□ -0.31
SMARCAL1-209ENST00000444508 C7orf66A4D0T2 115 aa13.09□□□□□ -0.31
SMARCAL1-209ENST00000444508 OR4C46A6NHA9 309 aa13.09□□□□□ -0.31
SMARCAL1-209ENST00000444508 A8MZ25 164 aa13.09□□□□□ -0.31
SMARCAL1-209ENST00000444508 K7EPK0 472 aa13.09□□□□□ -0.31
SMARCAL1-209ENST00000444508 GOSR2O14653 212 aa13.09□□□□□ -0.31
SMARCAL1-209ENST00000444508 SSNA1O43805 119 aa13.09□□□□□ -0.31
SMARCAL1-209ENST00000444508 PTTG1O95997 202 aa13.09□□□□□ -0.31
SMARCAL1-209ENST00000444508 APOHP02749 345 aaPredicted RBP13.09□□□□□ -0.31
SMARCAL1-209ENST00000444508 METTL15P1P0C7V9 234 aa13.09□□□□□ -0.31
SMARCAL1-209ENST00000444508 PSG1P11464 419 aa13.09□□□□□ -0.31
SMARCAL1-209ENST00000444508 PVALBP20472 110 aaPredicted RBP13.09□□□□□ -0.31
SMARCAL1-209ENST00000444508 CRYBB3P26998 211 aa13.09□□□□□ -0.31
SMARCAL1-209ENST00000444508 TMEM14EPQ6UXP3 125 aa13.09□□□□□ -0.31
SMARCAL1-209ENST00000444508 ACOT7LQ6ZUV0 252 aa13.09□□□□□ -0.31
SMARCAL1-209ENST00000444508 OR51G1Q8NGK1 321 aa13.09□□□□□ -0.31
SMARCAL1-209ENST00000444508 GRAMD2BQ96HH9 432 aa13.09□□□□□ -0.31
SMARCAL1-209ENST00000444508 COL7A1Q02388 2944 aa13.08□□□□□ -0.32
SMARCAL1-209ENST00000444508 IGKV1D-37A0A075B6S9 117 aa13.08□□□□□ -0.32
SMARCAL1-209ENST00000444508 SMCO3A2RU48 225 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms