RNA–Protein interactions for RNA: ENST00000443816.5

FN1-211, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 7,762 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-211ENST00000443816 C1QL1O75973 258 aa9.33□□□□□ -0.92
FN1-211ENST00000443816 GCSAMLQ5JQS6 135 aa9.33□□□□□ -0.92
FN1-211ENST00000443816 WNK1Q9H4A3 2382 aa9.33□□□□□ -0.92
FN1-211ENST00000443816 SCGB3A1Q96QR1 104 aa9.33□□□□□ -0.92
FN1-211ENST00000443816 TMEM160Q9NX00 188 aa9.33□□□□□ -0.92
FN1-211ENST00000443816 PLCE1Q9P212 2302 aa9.33□□□□□ -0.92
FN1-211ENST00000443816 SPATA45Q537H7 98 aa9.33□□□□□ -0.92
FN1-211ENST00000443816 TMEM219Q86XT9 240 aa9.33□□□□□ -0.92
FN1-211ENST00000443816 IGHV1-8P0DP01 117 aa9.33□□□□□ -0.92
FN1-211ENST00000443816 SRIP30626 198 aa9.33□□□□□ -0.92
FN1-211ENST00000443816 TPTE2P1Q5T6R2 138 aa9.33□□□□□ -0.92
FN1-211ENST00000443816 COL4A6Q14031 1691 aa9.32□□□□□ -0.92
FN1-211ENST00000443816 FABP2P12104 132 aa9.32□□□□□ -0.92
FN1-211ENST00000443816 IGFBP3P17936 291 aaPredicted RBP9.32□□□□□ -0.92
FN1-211ENST00000443816 FAM169BQ8N8A8 192 aa9.32□□□□□ -0.92
FN1-211ENST00000443816 RNF5Q99942 180 aa9.32□□□□□ -0.92
FN1-211ENST00000443816 SRRM5B3KS81 715 aa9.32□□□□□ -0.92
FN1-211ENST00000443816 PSCAO43653 123 aa9.32□□□□□ -0.92
FN1-211ENST00000443816 KLK2P20151 261 aa9.32□□□□□ -0.92
FN1-211ENST00000443816 MBNL3Q9NUK0 354 aaKnown RBP9.32□□□□□ -0.92
FN1-211ENST00000443816 FAM223BA6NKX1 122 aa9.32□□□□□ -0.92
FN1-211ENST00000443816 H3BUX3 64 aa9.32□□□□□ -0.92
FN1-211ENST00000443816 FAM223AQ8IWN6 122 aa9.32□□□□□ -0.92
FN1-211ENST00000443816 TOMM7Q9P0U1 55 aa9.32□□□□□ -0.92
FN1-211ENST00000443816 SMIM6P0DI80 62 aa9.32□□□□□ -0.92
FN1-211ENST00000443816 FAM71F2Q6NXP2 309 aa9.32□□□□□ -0.92
FN1-211ENST00000443816 TCF23Q7RTU1 214 aa9.32□□□□□ -0.92
FN1-211ENST00000443816 ZNF414Q96IQ9 312 aa9.32□□□□□ -0.92
FN1-211ENST00000443816 RPLP1P05386 114 aaKnown RBP9.32□□□□□ -0.92
FN1-211ENST00000443816 C3orf36Q3SXR2 165 aa9.32□□□□□ -0.92
FN1-211ENST00000443816 HEPN1Q6WQI6 88 aa9.32□□□□□ -0.92
FN1-211ENST00000443816 NUDT11Q96G61 164 aa9.32□□□□□ -0.92
FN1-211ENST00000443816 RPP21Q9H633 154 aaKnown RBP9.32□□□□□ -0.92
FN1-211ENST00000443816 A0A1B0GTI1 187 aa9.31□□□□□ -0.92
FN1-211ENST00000443816 C15orf32Q32M92 178 aa9.31□□□□□ -0.92
FN1-211ENST00000443816 RPUSD1Q9UJJ7 312 aaKnown RBP9.31□□□□□ -0.92
FN1-211ENST00000443816 RAMP3O60896 148 aa9.31□□□□□ -0.92
FN1-211ENST00000443816 Q0VFX4 171 aa9.31□□□□□ -0.92
FN1-211ENST00000443816 Q5PR19 223 aa9.31□□□□□ -0.92
FN1-211ENST00000443816 RARRES2Q99969 163 aa9.31□□□□□ -0.92
FN1-211ENST00000443816 IFT22Q9H7X7 185 aa9.31□□□□□ -0.92
FN1-211ENST00000443816 IGHV3OR16-8A0A075B7F1 116 aa9.31□□□□□ -0.92
FN1-211ENST00000443816 TFF3Q07654 80 aa9.31□□□□□ -0.92
FN1-211ENST00000443816 SLC25A48Q6ZT89 311 aaKnown RBP9.31□□□□□ -0.92
FN1-211ENST00000443816 ORMDL3Q8N138 153 aa9.31□□□□□ -0.92
FN1-211ENST00000443816 OR10S1Q8NGN2 331 aa9.31□□□□□ -0.92
FN1-211ENST00000443816 PLPPR1Q8TBJ4 325 aa9.31□□□□□ -0.92
FN1-211ENST00000443816 ST20Q9HBF5 79 aa9.31□□□□□ -0.92
FN1-211ENST00000443816 IFI27P40305 119 aaPredicted RBP9.31□□□□□ -0.92
FN1-211ENST00000443816 ZNF660Q6AZW8 331 aaPredicted RBP9.31□□□□□ -0.92
FN1-211ENST00000443816 A6NNC1 897 aa9.31□□□□□ -0.92
FN1-211ENST00000443816 CD8AP01732 235 aa9.31□□□□□ -0.92
FN1-211ENST00000443816 LCNL1Q6ZST4 164 aa9.31□□□□□ -0.92
FN1-211ENST00000443816 LTBP2Q14767 1821 aa9.31□□□□□ -0.92
FN1-211ENST00000443816 E9PQ18 207 aa9.3□□□□□ -0.92
FN1-211ENST00000443816 PRCDQ00LT1 54 aa9.3□□□□□ -0.92
FN1-211ENST00000443816 ZNF415Q09FC8 603 aa9.3□□□□□ -0.92
FN1-211ENST00000443816 TMEM136Q6ZRR5 245 aa9.3□□□□□ -0.92
FN1-211ENST00000443816 OR1P1Q8NH06 330 aa9.3□□□□□ -0.92
FN1-211ENST00000443816 VCX2Q9H322 139 aa9.3□□□□□ -0.92
FN1-211ENST00000443816 F2Z2F3 143 aa9.3□□□□□ -0.92
FN1-211ENST00000443816 NAT1P18440 290 aa9.3□□□□□ -0.92
FN1-211ENST00000443816 DUTP33316 252 aaKnown RBP9.3□□□□□ -0.92
FN1-211ENST00000443816 TMEM155Q4W5P6 130 aa9.3□□□□□ -0.92
FN1-211ENST00000443816 PSMG4Q5JS54 123 aa9.3□□□□□ -0.92
FN1-211ENST00000443816 LYZL4Q96KX0 146 aa9.3□□□□□ -0.92
FN1-211ENST00000443816 IGHV1-3A0A0C4DH29 117 aa9.3□□□□□ -0.92
FN1-211ENST00000443816 PIP4P2Q8N4L2 257 aa9.3□□□□□ -0.92
FN1-211ENST00000443816 Q96MF0 132 aa9.3□□□□□ -0.92
FN1-211ENST00000443816 JKAMPQ9P055 326 aa9.3□□□□□ -0.92
FN1-211ENST00000443816 BIVMQ86UB2 503 aa9.3□□□□□ -0.92
FN1-211ENST00000443816 RCC1LQ96I51 464 aaKnown RBP9.3□□□□□ -0.92
FN1-211ENST00000443816 MSMBP08118 114 aa9.29□□□□□ -0.92
FN1-211ENST00000443816 H2BFSP57053 126 aa9.29□□□□□ -0.92
FN1-211ENST00000443816 GLRX5Q86SX6 157 aa9.29□□□□□ -0.92
FN1-211ENST00000443816 BPESC1Q9GZL8 116 aa9.29□□□□□ -0.92
FN1-211ENST00000443816 BUB1B-PAK6H3BSN5 160 aa9.29□□□□□ -0.92
FN1-211ENST00000443816 TNFSF13O75888 250 aa9.29□□□□□ -0.92
FN1-211ENST00000443816 IGHG3P01860 377 aa9.29□□□□□ -0.92
FN1-211ENST00000443816 HOXA5P20719 270 aa9.29□□□□□ -0.92
FN1-211ENST00000443816 ZNF525Q8N782 197 aa9.29□□□□□ -0.92
FN1-211ENST00000443816 PGPEP1Q9NXJ5 209 aa9.29□□□□□ -0.92
FN1-211ENST00000443816 TRGC2P03986 189 aa9.29□□□□□ -0.92
FN1-211ENST00000443816 IL36BQ9NZH7 164 aa9.29□□□□□ -0.92
FN1-211ENST00000443816 MED13LQ71F56 2210 aa9.29□□□□□ -0.92
FN1-211ENST00000443816 NUP210LQ5VU65 1888 aa9.29□□□□□ -0.92
FN1-211ENST00000443816 MALRD1Q5VYJ5 2156 aa9.29□□□□□ -0.92
FN1-211ENST00000443816 ADARB2-AS1A8MUL3 147 aa9.29□□□□□ -0.92
FN1-211ENST00000443816 ZNF250P15622 560 aa9.29□□□□□ -0.92
FN1-211ENST00000443816 OR11H12B2RN74 326 aa9.29□□□□□ -0.92
FN1-211ENST00000443816 OR11H1Q8NG94 326 aa9.29□□□□□ -0.92
FN1-211ENST00000443816 OR11H2Q8NH07 326 aa9.29□□□□□ -0.92
FN1-211ENST00000443816 RNF223E7ERA6 249 aa9.28□□□□□ -0.92
FN1-211ENST00000443816 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.28□□□□□ -0.92
FN1-211ENST00000443816 CRYGSP22914 178 aa9.28□□□□□ -0.92
FN1-211ENST00000443816 KLRD1Q13241 179 aa9.28□□□□□ -0.92
FN1-211ENST00000443816 ARL6IP6Q8N6S5 226 aa9.28□□□□□ -0.92
FN1-211ENST00000443816 C18orf12Q96KH6 178 aa9.28□□□□□ -0.92
FN1-211ENST00000443816 RTBDNQ9BSG5 229 aaPredicted RBP9.28□□□□□ -0.92
FN1-211ENST00000443816 NBL1P41271 181 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms