RNA–Protein interactions for RNA: ENST00000443443.1

VPS50-206, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-206ENST00000443443 TRAV30A0A087WSZ9 112 aa3.04□□□□□ -1.92
VPS50-206ENST00000443443 A0A087X0T9 212 aa3.04□□□□□ -1.92
VPS50-206ENST00000443443 TMEM223A0PJW6 202 aa3.04□□□□□ -1.92
VPS50-206ENST00000443443 A6NDX4 124 aa3.04□□□□□ -1.92
VPS50-206ENST00000443443 IFITM5A6NNB3 132 aa3.04□□□□□ -1.92
VPS50-206ENST00000443443 H3BMG7 143 aa3.04□□□□□ -1.92
VPS50-206ENST00000443443 UBFD1O14562 309 aaKnown RBP3.04□□□□□ -1.92
VPS50-206ENST00000443443 NDUFB3O43676 98 aa3.04□□□□□ -1.92
VPS50-206ENST00000443443 NDUFB2O95178 105 aa3.04□□□□□ -1.92
VPS50-206ENST00000443443 ZNF728P0DKX0 622 aa3.04□□□□□ -1.92
VPS50-206ENST00000443443 HLA-EP13747 358 aa3.04□□□□□ -1.92
VPS50-206ENST00000443443 CRYBB3P26998 211 aa3.04□□□□□ -1.92
VPS50-206ENST00000443443 RHOGP84095 191 aa3.04□□□□□ -1.92
VPS50-206ENST00000443443 MEF2BQ02080 365 aaPredicted RBP3.04□□□□□ -1.92
VPS50-206ENST00000443443 ZNF141Q15928 474 aa3.04□□□□□ -1.92
VPS50-206ENST00000443443 LGALS9BQ3B8N2 356 aa3.04□□□□□ -1.92
VPS50-206ENST00000443443 HSD17B12Q53GQ0 312 aa3.04□□□□□ -1.92
VPS50-206ENST00000443443 LGALS9CQ6DKI2 356 aa3.04□□□□□ -1.92
VPS50-206ENST00000443443 ZNF767PQ75MW2 155 aa3.04□□□□□ -1.92
VPS50-206ENST00000443443 TEX29Q8N6K0 151 aa3.04□□□□□ -1.92
VPS50-206ENST00000443443 Q8N9W7 124 aa3.04□□□□□ -1.92
VPS50-206ENST00000443443 PP6455Q8WZ26 134 aa3.04□□□□□ -1.92
VPS50-206ENST00000443443 TMEM133Q9H2Q1 129 aa3.04□□□□□ -1.92
VPS50-206ENST00000443443 CCDC167Q9P0B6 97 aa3.04□□□□□ -1.92
VPS50-206ENST00000443443 BOKQ9UMX3 212 aaPredicted RBP3.04□□□□□ -1.92
VPS50-206ENST00000443443 RNF11Q9Y3C5 154 aa3.04□□□□□ -1.92
VPS50-206ENST00000443443 TMEM14AQ9Y6G1 99 aa3.04□□□□□ -1.92
VPS50-206ENST00000443443 XIRP1Q702N8 1843 aaKnown RBP3.04□□□□□ -1.92
VPS50-206ENST00000443443 SPATA31E1Q6ZUB1 1445 aa3.03□□□□□ -1.92
VPS50-206ENST00000443443 DSPPQ9NZW4 1301 aa3.03□□□□□ -1.92
VPS50-206ENST00000443443 UQCRHLA0A096LP55 91 aa3.03□□□□□ -1.92
VPS50-206ENST00000443443 IGKV3-11P04433 115 aa3.03□□□□□ -1.92
VPS50-206ENST00000443443 UQCRHP07919 91 aa3.03□□□□□ -1.92
VPS50-206ENST00000443443 CXCL1P09341 107 aa3.03□□□□□ -1.92
VPS50-206ENST00000443443 CRYGSP22914 178 aa3.03□□□□□ -1.92
VPS50-206ENST00000443443 PSMB8P28062 276 aa3.03□□□□□ -1.92
VPS50-206ENST00000443443 TGFBR1P36897 503 aa3.03□□□□□ -1.92
VPS50-206ENST00000443443 TSPEAR-AS2P59090 65 aa3.03□□□□□ -1.92
VPS50-206ENST00000443443 KRTAP10-1P60331 282 aa3.03□□□□□ -1.92
VPS50-206ENST00000443443 HBBP68871 147 aa3.03□□□□□ -1.92
VPS50-206ENST00000443443 AKR1C1Q04828 323 aa3.03□□□□□ -1.92
VPS50-206ENST00000443443 RPL18Q07020 188 aaKnown RBP3.03□□□□□ -1.92
VPS50-206ENST00000443443 SP6Q3SY56 376 aa3.03□□□□□ -1.92
VPS50-206ENST00000443443 LINC01554Q52M75 96 aa3.03□□□□□ -1.92
VPS50-206ENST00000443443 NTM-AS1Q6ZSK4 140 aa3.03□□□□□ -1.92
VPS50-206ENST00000443443 SPATA12Q7Z6I5 190 aa3.03□□□□□ -1.92
VPS50-206ENST00000443443 C3orf22Q8N5N4 141 aa3.03□□□□□ -1.92
VPS50-206ENST00000443443 ZFAND2AQ8N6M9 145 aa3.03□□□□□ -1.92
VPS50-206ENST00000443443 C15orf56Q8N910 161 aa3.03□□□□□ -1.92
VPS50-206ENST00000443443 SFT2D1Q8WV19 159 aa3.03□□□□□ -1.92
VPS50-206ENST00000443443 RBPMSQ93062 196 aaKnown RBP3.03□□□□□ -1.92
VPS50-206ENST00000443443 SLC25A46Q96AG3 418 aa3.03□□□□□ -1.92
VPS50-206ENST00000443443 ZC2HC1AQ96GY0 325 aa3.03□□□□□ -1.92
VPS50-206ENST00000443443 MRPL32Q9BYC8 188 aaKnown RBP3.03□□□□□ -1.92
VPS50-206ENST00000443443 FAM60AQ9NP50 221 aa3.03□□□□□ -1.92
VPS50-206ENST00000443443 OSTCQ9NRP0 149 aa3.03□□□□□ -1.92
VPS50-206ENST00000443443 ZNF222Q9UK12 451 aa3.03□□□□□ -1.92
VPS50-206ENST00000443443 ADGBQ8N7X0 1667 aa3.03□□□□□ -1.92
VPS50-206ENST00000443443 BCL9LQ86UU0 1499 aa3.03□□□□□ -1.93
VPS50-206ENST00000443443 ADAMTSL1Q8N6G6 1762 aa3.02□□□□□ -1.93
VPS50-206ENST00000443443 TRGV10A0A0A0MS01 117 aa3.02□□□□□ -1.93
VPS50-206ENST00000443443 A0A0D9SEW6 157 aa3.02□□□□□ -1.93
VPS50-206ENST00000443443 IGHV3-64DA0A0J9YX35 117 aa3.02□□□□□ -1.93
VPS50-206ENST00000443443 A6NED7 52 aa3.02□□□□□ -1.93
VPS50-206ENST00000443443 OR2T8A6NH00 312 aa3.02□□□□□ -1.93
VPS50-206ENST00000443443 A8MWV9 139 aa3.02□□□□□ -1.93
VPS50-206ENST00000443443 C19orf84I3L1E1 186 aa3.02□□□□□ -1.93
VPS50-206ENST00000443443 LEPROTO15243 131 aa3.02□□□□□ -1.93
VPS50-206ENST00000443443 HIST1H2BKO60814 126 aa3.02□□□□□ -1.93
VPS50-206ENST00000443443 IGHV1-46P01743 117 aa3.02□□□□□ -1.93
VPS50-206ENST00000443443 C1QAP02745 245 aa3.02□□□□□ -1.93
VPS50-206ENST00000443443 HIST1H2BJP06899 126 aa3.02□□□□□ -1.93
VPS50-206ENST00000443443 SLC25A16P16260 332 aa3.02□□□□□ -1.93
VPS50-206ENST00000443443 EIF2B2P49770 351 aaKnown RBP3.02□□□□□ -1.93
VPS50-206ENST00000443443 DYNLT3P51808 116 aa3.02□□□□□ -1.93
VPS50-206ENST00000443443 AQP4P55087 323 aa3.02□□□□□ -1.93
VPS50-206ENST00000443443 FXYD7P58549 80 aa3.02□□□□□ -1.93
VPS50-206ENST00000443443 CDK6Q00534 326 aa3.02□□□□□ -1.93
VPS50-206ENST00000443443 SYCNQ0VAF6 134 aa3.02□□□□□ -1.93
VPS50-206ENST00000443443 CCSMST1Q4G0I0 132 aa3.02□□□□□ -1.93
VPS50-206ENST00000443443 NCMAPQ5T1S8 102 aa3.02□□□□□ -1.93
VPS50-206ENST00000443443 ZNF880Q6PDB4 577 aa3.02□□□□□ -1.93
VPS50-206ENST00000443443 BPIFA4PQ86YQ2 179 aa3.02□□□□□ -1.93
VPS50-206ENST00000443443 HIST3H2BBQ8N257 126 aa3.02□□□□□ -1.93
VPS50-206ENST00000443443 OR5D14Q8NGL3 314 aa3.02□□□□□ -1.93
VPS50-206ENST00000443443 OR10AC1Q8NH08 325 aa3.02□□□□□ -1.93
VPS50-206ENST00000443443 LINC01560Q8TB33 94 aa3.02□□□□□ -1.93
VPS50-206ENST00000443443 CIRBP-AS1Q8TBR5 109 aa3.02□□□□□ -1.93
VPS50-206ENST00000443443 OR4C12Q96R67 309 aa3.02□□□□□ -1.93
VPS50-206ENST00000443443 HIST1H2BLQ99880 126 aa3.02□□□□□ -1.93
VPS50-206ENST00000443443 ZNF835Q9Y2P0 537 aa3.02□□□□□ -1.93
VPS50-206ENST00000443443 TTC37Q6PGP7 1564 aa3.02□□□□□ -1.93
VPS50-206ENST00000443443 ARHGAP31Q2M1Z3 1444 aa3.02□□□□□ -1.93
VPS50-206ENST00000443443 TRAV27A0A087WT01 109 aa3.01□□□□□ -1.93
VPS50-206ENST00000443443 LOC100130705A0A1B0GUX0 176 aa3.01□□□□□ -1.93
VPS50-206ENST00000443443 CDC42EP2O14613 210 aa3.01□□□□□ -1.93
VPS50-206ENST00000443443 CCL25O15444 150 aa3.01□□□□□ -1.93
VPS50-206ENST00000443443 SLC25A20O43772 301 aa3.01□□□□□ -1.93
VPS50-206ENST00000443443 IGHV3-30-3P0DP02 117 aa3.01□□□□□ -1.93
VPS50-206ENST00000443443 HIST1H1DP16402 221 aaKnown RBP3.01□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms