RNA–Protein interactions for RNA: ENST00000442201.6

CCDC39-201, Transcript of coiled-coil domain containing 39, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC39, Length 3,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-201ENST00000442201 MOB3BQ86TA1 216 aa6.52□□□□□ -1.37
CCDC39-201ENST00000442201 LRRC75A-AS1Q8N1F1 130 aa6.52□□□□□ -1.37
CCDC39-201ENST00000442201 HARBI1Q96MB7 349 aa6.52□□□□□ -1.37
CCDC39-201ENST00000442201 FAM110AQ9BQ89 295 aa6.52□□□□□ -1.37
CCDC39-201ENST00000442201 C11orf1Q9H5F2 150 aa6.52□□□□□ -1.37
CCDC39-201ENST00000442201 FBN2P35556 2912 aa6.51□□□□□ -1.37
CCDC39-201ENST00000442201 IGHV1-3A0A0C4DH29 117 aa6.51□□□□□ -1.37
CCDC39-201ENST00000442201 IGLC7A0M8Q6 106 aa6.51□□□□□ -1.37
CCDC39-201ENST00000442201 ODF3BA8MYP8 253 aa6.51□□□□□ -1.37
CCDC39-201ENST00000442201 LY6LH3BQJ8 138 aa6.51□□□□□ -1.37
CCDC39-201ENST00000442201 OR9G9P0C7N8 305 aa6.51□□□□□ -1.37
CCDC39-201ENST00000442201 LGALS4P56470 323 aa6.51□□□□□ -1.37
CCDC39-201ENST00000442201 RPL23AP62750 156 aaKnown RBP6.51□□□□□ -1.37
CCDC39-201ENST00000442201 Q6ZWC4 215 aa6.51□□□□□ -1.37
CCDC39-201ENST00000442201 PAM16Q9Y3D7 125 aa6.51□□□□□ -1.37
CCDC39-201ENST00000442201 RFNGQ9Y644 331 aa6.51□□□□□ -1.37
CCDC39-201ENST00000442201 NAV2Q8IVL1 2488 aa6.51□□□□□ -1.37
CCDC39-201ENST00000442201 MED13LQ71F56 2210 aa6.51□□□□□ -1.37
CCDC39-201ENST00000442201 DOPEY2Q9Y3R5 2298 aa6.51□□□□□ -1.37
CCDC39-201ENST00000442201 IGHV3-72A0A0B4J1Y9 119 aa6.51□□□□□ -1.37
CCDC39-201ENST00000442201 A0A1W2PRD5 423 aa6.51□□□□□ -1.37
CCDC39-201ENST00000442201 A0A1W2PRF3 423 aa6.51□□□□□ -1.37
CCDC39-201ENST00000442201 A0A1W2PRM7 423 aa6.51□□□□□ -1.37
CCDC39-201ENST00000442201 HYPMO75409 117 aa6.51□□□□□ -1.37
CCDC39-201ENST00000442201 TMEM50AO95807 157 aa6.51□□□□□ -1.37
CCDC39-201ENST00000442201 HOXB4P17483 251 aaPredicted RBP6.51□□□□□ -1.37
CCDC39-201ENST00000442201 RAB9AP51151 201 aa6.51□□□□□ -1.37
CCDC39-201ENST00000442201 CNN1P51911 297 aaKnown RBP6.51□□□□□ -1.37
CCDC39-201ENST00000442201 RPS16P62249 146 aaKnown RBP6.51□□□□□ -1.37
CCDC39-201ENST00000442201 PAFAH1B2P68402 229 aa6.51□□□□□ -1.37
CCDC39-201ENST00000442201 HIST2H2BCQ6DN03 193 aa6.51□□□□□ -1.37
CCDC39-201ENST00000442201 PET117Q6UWS5 81 aa6.51□□□□□ -1.37
CCDC39-201ENST00000442201 Q8N976 141 aa6.51□□□□□ -1.37
CCDC39-201ENST00000442201 OR5B3Q8NH48 314 aa6.51□□□□□ -1.37
CCDC39-201ENST00000442201 SSBP4Q9BWG4 385 aaPredicted RBP6.51□□□□□ -1.37
CCDC39-201ENST00000442201 WSB1Q9Y6I7 421 aa6.51□□□□□ -1.37
CCDC39-201ENST00000442201 GAGE12BA1L429 117 aa6.51□□□□□ -1.37
CCDC39-201ENST00000442201 FAM24AA6NFZ4 105 aa6.51□□□□□ -1.37
CCDC39-201ENST00000442201 OR7C2O60412 319 aa6.51□□□□□ -1.37
CCDC39-201ENST00000442201 OR10J4P0C629 311 aa6.51□□□□□ -1.37
CCDC39-201ENST00000442201 IAPPP10997 89 aa6.51□□□□□ -1.37
CCDC39-201ENST00000442201 TAS2R30P59541 319 aa6.51□□□□□ -1.37
CCDC39-201ENST00000442201 RELBQ01201 579 aa6.51□□□□□ -1.37
CCDC39-201ENST00000442201 TMEM252Q8N6L7 170 aa6.51□□□□□ -1.37
CCDC39-201ENST00000442201 CYB561D1Q8N8Q1 229 aa6.51□□□□□ -1.37
CCDC39-201ENST00000442201 RBMXL1Q96E39 390 aaKnown RBP6.51□□□□□ -1.37
CCDC39-201ENST00000442201 POLQO75417 2590 aa6.5□□□□□ -1.37
CCDC39-201ENST00000442201 SRRM4A7MD48 611 aaKnown RBP6.5□□□□□ -1.37
CCDC39-201ENST00000442201 CEBPZOSA8MTT3 80 aa6.5□□□□□ -1.37
CCDC39-201ENST00000442201 BRI3O95415 125 aa6.5□□□□□ -1.37
CCDC39-201ENST00000442201 MSMBP08118 114 aa6.5□□□□□ -1.37
CCDC39-201ENST00000442201 UBE2E1P51965 193 aa6.5□□□□□ -1.37
CCDC39-201ENST00000442201 PAX9P55771 341 aa6.5□□□□□ -1.37
CCDC39-201ENST00000442201 EWSR1Q01844 656 aaKnown RBP eCLIP6.5□□□□□ -1.37
CCDC39-201ENST00000442201 PAX8Q06710 450 aa6.5□□□□□ -1.37
CCDC39-201ENST00000442201 MINOS1Q5TGZ0 78 aa6.5□□□□□ -1.37
CCDC39-201ENST00000442201 VSTM2AQ8TAG5 236 aa6.5□□□□□ -1.37
CCDC39-201ENST00000442201 EAF1Q96JC9 268 aaPredicted RBP6.5□□□□□ -1.37
CCDC39-201ENST00000442201 QTRT1Q9BXR0 403 aaKnown RBP6.5□□□□□ -1.37
CCDC39-201ENST00000442201 HILPDAQ9Y5L2 63 aa6.5□□□□□ -1.37
CCDC39-201ENST00000442201 MINOS1-NBL1R4GNA1 71 aa6.5□□□□□ -1.37
CCDC39-201ENST00000442201 ABCA12Q86UK0 2595 aa6.5□□□□□ -1.37
CCDC39-201ENST00000442201 TRAV3A0A0B4J244 114 aa6.5□□□□□ -1.37
CCDC39-201ENST00000442201 C15orf61A6NNL5 157 aa6.5□□□□□ -1.37
CCDC39-201ENST00000442201 B4DSR2 109 aa6.5□□□□□ -1.37
CCDC39-201ENST00000442201 H3BP45 60 aa6.5□□□□□ -1.37
CCDC39-201ENST00000442201 H7BYZ3 331 aa6.5□□□□□ -1.37
CCDC39-201ENST00000442201 SAA1P0DJI8 122 aaPredicted RBP6.5□□□□□ -1.37
CCDC39-201ENST00000442201 HNRNPA3P51991 378 aaKnown RBP6.5□□□□□ -1.37
CCDC39-201ENST00000442201 FAM90A2PQ658T7 463 aa6.5□□□□□ -1.37
CCDC39-201ENST00000442201 CCDC144NLQ6NUI1 221 aa6.5□□□□□ -1.37
CCDC39-201ENST00000442201 OR52E5Q8NH55 327 aa6.5□□□□□ -1.37
CCDC39-201ENST00000442201 MBD6Q96DN6 1003 aa6.5□□□□□ -1.37
CCDC39-201ENST00000442201 SDF2L1Q9HCN8 221 aa6.5□□□□□ -1.37
CCDC39-201ENST00000442201 PSENENQ9NZ42 101 aa6.5□□□□□ -1.37
CCDC39-201ENST00000442201 PRNDQ9UKY0 176 aa6.5□□□□□ -1.37
CCDC39-201ENST00000442201 ARHGAP32A7KAX9 2087 aa6.5□□□□□ -1.37
CCDC39-201ENST00000442201 CELSR2Q9HCU4 2923 aa6.5□□□□□ -1.37
CCDC39-201ENST00000442201 A0A1W2PPI3 338 aa6.49□□□□□ -1.37
CCDC39-201ENST00000442201 IGSF23A1L1A6 192 aa6.49□□□□□ -1.37
CCDC39-201ENST00000442201 MAP1LC3B2A6NCE7 125 aa6.49□□□□□ -1.37
CCDC39-201ENST00000442201 OOSP1A8MZH6 123 aa6.49□□□□□ -1.37
CCDC39-201ENST00000442201 UPK2O00526 184 aa6.49□□□□□ -1.37
CCDC39-201ENST00000442201 SAP30O75446 220 aa6.49□□□□□ -1.37
CCDC39-201ENST00000442201 VMA21Q3ZAQ7 101 aa6.49□□□□□ -1.37
CCDC39-201ENST00000442201 OR51G1Q8NGK1 321 aa6.49□□□□□ -1.37
CCDC39-201ENST00000442201 SPXQ9BT56 116 aa6.49□□□□□ -1.37
CCDC39-201ENST00000442201 MAP1LC3BQ9GZQ8 125 aa6.49□□□□□ -1.37
CCDC39-201ENST00000442201 NAT8Q9UHE5 227 aa6.49□□□□□ -1.37
CCDC39-201ENST00000442201 FOXA2Q9Y261 457 aaPredicted RBP6.49□□□□□ -1.37
CCDC39-201ENST00000442201 TIMM23O14925 209 aa6.49□□□□□ -1.37
CCDC39-201ENST00000442201 KBTBD11O94819 623 aa6.49□□□□□ -1.37
CCDC39-201ENST00000442201 MDKP21741 143 aaPredicted RBP6.49□□□□□ -1.37
CCDC39-201ENST00000442201 TSPOP30536 169 aa6.49□□□□□ -1.37
CCDC39-201ENST00000442201 BAXQ07812 192 aa6.49□□□□□ -1.37
CCDC39-201ENST00000442201 VAMP3Q15836 100 aa6.49□□□□□ -1.37
CCDC39-201ENST00000442201 SMIM3Q9BZL3 60 aa6.49□□□□□ -1.37
CCDC39-201ENST00000442201 TMEM14BQ9NUH8 114 aa6.49□□□□□ -1.37
CCDC39-201ENST00000442201 TNFRSF18Q9Y5U5 241 aa6.49□□□□□ -1.37
CCDC39-201ENST00000442201 TAX1BP3O14907 124 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms