RNA–Protein interactions for RNA: ENST00000441141.5

VPS8-208, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 4

Gene VPS8, Length 549 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-208ENST00000441141 NCOA1Q15788 1441 aa0.75□□□□□ -2.29
VPS8-208ENST00000441141 FAM236DA0A1B0GTK5 79 aa0.75□□□□□ -2.29
VPS8-208ENST00000441141 SMIM9A6NGZ8 99 aa0.75□□□□□ -2.29
VPS8-208ENST00000441141 CNIH1O95406 144 aa0.75□□□□□ -2.29
VPS8-208ENST00000441141 FAM236CP0DP71 79 aa0.75□□□□□ -2.29
VPS8-208ENST00000441141 ANP32AP39687 249 aaKnown RBP0.75□□□□□ -2.29
VPS8-208ENST00000441141 EDDM3AQ14507 147 aa0.75□□□□□ -2.29
VPS8-208ENST00000441141 IAH1Q2TAA2 248 aaPredicted RBP0.75□□□□□ -2.29
VPS8-208ENST00000441141 ZNF418Q8TF45 676 aaPredicted RBP0.75□□□□□ -2.29
VPS8-208ENST00000441141 DCSTAMPQ9H295 470 aa0.75□□□□□ -2.29
VPS8-208ENST00000441141 MUC16Q8WXI7 14507 aa0.75□□□□□ -2.29
VPS8-208ENST00000441141 HECW1Q76N89 1606 aa0.75□□□□□ -2.29
VPS8-208ENST00000441141 HECW2Q9P2P5 1572 aa0.74□□□□□ -2.29
VPS8-208ENST00000441141 RTL1A6NKG5 1358 aa0.74□□□□□ -2.29
VPS8-208ENST00000441141 DENND4CQ5VZ89 1909 aa0.74□□□□□ -2.29
VPS8-208ENST00000441141 A0A087X0T9 212 aa0.74□□□□□ -2.29
VPS8-208ENST00000441141 TRAV12-1A0A0B4J245 112 aa0.74□□□□□ -2.29
VPS8-208ENST00000441141 BUB1B-PAK6H3BSN5 160 aa0.74□□□□□ -2.29
VPS8-208ENST00000441141 M0R2N4 97 aa0.74□□□□□ -2.29
VPS8-208ENST00000441141 E2F6O75461 281 aa0.74□□□□□ -2.29
VPS8-208ENST00000441141 MGST1P10620 155 aaKnown RBP0.74□□□□□ -2.29
VPS8-208ENST00000441141 PPIBP23284 216 aaKnown RBP0.74□□□□□ -2.29
VPS8-208ENST00000441141 SSR2P43308 183 aa0.74□□□□□ -2.29
VPS8-208ENST00000441141 HIST1H3AP68431 136 aa0.74□□□□□ -2.29
VPS8-208ENST00000441141 H3F3AP84243 136 aa0.74□□□□□ -2.29
VPS8-208ENST00000441141 PRB3Q04118 309 aaPredicted RBP0.74□□□□□ -2.29
VPS8-208ENST00000441141 GDPD1Q8N9F7 314 aa0.74□□□□□ -2.29
VPS8-208ENST00000441141 OR10J5Q8NHC4 309 aa0.74□□□□□ -2.29
VPS8-208ENST00000441141 PRAP1Q96NZ9 151 aa0.74□□□□□ -2.29
VPS8-208ENST00000441141 RNASE7Q9H1E1 156 aaKnown RBP0.74□□□□□ -2.29
VPS8-208ENST00000441141 PRELID3BQ9Y3B1 194 aa0.74□□□□□ -2.29
VPS8-208ENST00000441141 LAMB4A4D0S4 1761 aa0.74□□□□□ -2.29
VPS8-208ENST00000441141 NCOA6Q14686 2063 aaPredicted RBP0.74□□□□□ -2.29
VPS8-208ENST00000441141 NEO1Q92859 1461 aa0.73□□□□□ -2.29
VPS8-208ENST00000441141 ROBO3Q96MS0 1386 aa0.73□□□□□ -2.29
VPS8-208ENST00000441141 hADV38S2A0JD32 116 aa0.73□□□□□ -2.29
VPS8-208ENST00000441141 OR2J2O76002 312 aa0.73□□□□□ -2.29
VPS8-208ENST00000441141 S100A6P06703 90 aa0.73□□□□□ -2.29
VPS8-208ENST00000441141 OR4E1P0C645 316 aa0.73□□□□□ -2.29
VPS8-208ENST00000441141 CCL7P80098 99 aa0.73□□□□□ -2.29
VPS8-208ENST00000441141 SRSF6Q13247 344 aaKnown RBP0.73□□□□□ -2.29
VPS8-208ENST00000441141 RNASE10Q5GAN6 216 aaKnown RBP0.73□□□□□ -2.29
VPS8-208ENST00000441141 GDF5OSQ5U4N7 250 aa0.73□□□□□ -2.29
VPS8-208ENST00000441141 C12orf45Q8N5I9 185 aaPredicted RBP0.73□□□□□ -2.29
VPS8-208ENST00000441141 OR52R1Q8NGF1 315 aa0.73□□□□□ -2.29
VPS8-208ENST00000441141 OR13D1Q8NGV5 346 aa0.73□□□□□ -2.29
VPS8-208ENST00000441141 C14orf105Q9NVL8 296 aa0.73□□□□□ -2.29
VPS8-208ENST00000441141 FBXO5Q9UKT4 447 aa0.73□□□□□ -2.29
VPS8-208ENST00000441141 SLC22A13Q9Y226 551 aa0.73□□□□□ -2.29
VPS8-208ENST00000441141 ZFP30Q9Y2G7 519 aa0.73□□□□□ -2.29
VPS8-208ENST00000441141 SBF1O95248 1867 aa0.73□□□□□ -2.29
VPS8-208ENST00000441141 ZNF106Q9H2Y7 1883 aaKnown RBP0.73□□□□□ -2.29
VPS8-208ENST00000441141 TAF1LQ8IZX4 1826 aa0.73□□□□□ -2.29
VPS8-208ENST00000441141 hCG_1818297A0A087WSY0 165 aa0.72□□□□□ -2.29
VPS8-208ENST00000441141 TRBV6-8A0A0A6YYG3 113 aa0.72□□□□□ -2.29
VPS8-208ENST00000441141 A8MT66 165 aa0.72□□□□□ -2.29
VPS8-208ENST00000441141 TMEM114B3SHH9 223 aa0.72□□□□□ -2.29
VPS8-208ENST00000441141 SPA17Q15506 151 aa0.72□□□□□ -2.29
VPS8-208ENST00000441141 LINC01554Q52M75 96 aa0.72□□□□□ -2.29
VPS8-208ENST00000441141 LYRM7Q5U5X0 104 aa0.72□□□□□ -2.29
VPS8-208ENST00000441141 OR2T10Q8NGZ9 312 aa0.72□□□□□ -2.29
VPS8-208ENST00000441141 OBSCN-AS1Q96MR7 158 aa0.72□□□□□ -2.29
VPS8-208ENST00000441141 HIST1H2BLQ99880 126 aa0.72□□□□□ -2.29
VPS8-208ENST00000441141 C6orf62Q9GZU0 229 aaPredicted RBP0.72□□□□□ -2.29
VPS8-208ENST00000441141 RNF122Q9H9V4 155 aa0.72□□□□□ -2.29
VPS8-208ENST00000441141 C14orf132Q9NPU4 83 aa0.72□□□□□ -2.29
VPS8-208ENST00000441141 UQCC1Q9NVA1 299 aa0.72□□□□□ -2.29
VPS8-208ENST00000441141 TVP23BQ9NYZ1 205 aa0.72□□□□□ -2.29
VPS8-208ENST00000441141 CCDC144AA2RUR9 1427 aa0.72□□□□□ -2.29
VPS8-208ENST00000441141 NOTCH1P46531 2555 aa0.71□□□□□ -2.3
VPS8-208ENST00000441141 TNRC6AQ8NDV7 1962 aaKnown RBP0.71□□□□□ -2.3
VPS8-208ENST00000441141 SCN10AQ9Y5Y9 1956 aa0.71□□□□□ -2.3
VPS8-208ENST00000441141 INE1O15225 51 aa0.71□□□□□ -2.3
VPS8-208ENST00000441141 LYZL6O75951 148 aa0.71□□□□□ -2.3
VPS8-208ENST00000441141 ZNF682O95780 498 aa0.71□□□□□ -2.3
VPS8-208ENST00000441141 HAND1O96004 215 aa0.71□□□□□ -2.3
VPS8-208ENST00000441141 SERPINE1P05121 402 aa0.71□□□□□ -2.3
VPS8-208ENST00000441141 C8GP07360 202 aa0.71□□□□□ -2.3
VPS8-208ENST00000441141 CTXN2P0C2S0 81 aa0.71□□□□□ -2.3
VPS8-208ENST00000441141 ERVS71-1P61550 626 aa0.71□□□□□ -2.3
VPS8-208ENST00000441141 RHOBP62745 196 aa0.71□□□□□ -2.3
VPS8-208ENST00000441141 FADDQ13158 208 aa0.71□□□□□ -2.3
VPS8-208ENST00000441141 TSNQ15631 228 aaKnown RBP0.71□□□□□ -2.3
VPS8-208ENST00000441141 C12orf74Q32Q52 190 aa0.71□□□□□ -2.3
VPS8-208ENST00000441141 TMEM97Q5BJF2 176 aa0.71□□□□□ -2.3
VPS8-208ENST00000441141 C1orf137Q5JT78 98 aa0.71□□□□□ -2.3
VPS8-208ENST00000441141 BRMS1LQ5PSV4 323 aa0.71□□□□□ -2.3
VPS8-208ENST00000441141 LINC00301Q8NCQ3 95 aa0.71□□□□□ -2.3
VPS8-208ENST00000441141 OR8D4Q8NGM9 314 aa0.71□□□□□ -2.3
VPS8-208ENST00000441141 FAM172AQ8WUF8 416 aa0.71□□□□□ -2.3
VPS8-208ENST00000441141 BTF3L4Q96K17 158 aa0.71□□□□□ -2.3
VPS8-208ENST00000441141 IDI2-AS1Q9NZ38 188 aa0.71□□□□□ -2.3
VPS8-208ENST00000441141 GLTPQ9NZD2 209 aa0.71□□□□□ -2.3
VPS8-208ENST00000441141 CEP192Q8TEP8 1941 aa0.71□□□□□ -2.3
VPS8-208ENST00000441141 PLXND1Q9Y4D7 1925 aa0.71□□□□□ -2.3
VPS8-208ENST00000441141 ADGRB2O60241 1585 aa0.7□□□□□ -2.3
VPS8-208ENST00000441141 MED1Q15648 1581 aaPredicted RBP0.7□□□□□ -2.3
VPS8-208ENST00000441141 CYB5BO43169 146 aa0.7□□□□□ -2.3
VPS8-208ENST00000441141 PDE6DO43924 150 aa0.7□□□□□ -2.3
VPS8-208ENST00000441141 DEFA3P59666 94 aa0.7□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms