RNA–Protein interactions for RNA: ENST00000440514.1

CPSF4-205, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 3

Gene CPSF4, Length 578 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-205ENST00000440514 TOMM20LQ6UXN7 152 aa13.6□□□□□ -0.23
CPSF4-205ENST00000440514 ZNF600Q6ZNG1 722 aa13.6□□□□□ -0.23
CPSF4-205ENST00000440514 ZFAND3Q9H8U3 227 aa13.6□□□□□ -0.23
CPSF4-205ENST00000440514 PUS1Q9Y606 427 aaKnown RBP eCLIP13.6□□□□□ -0.23
CPSF4-205ENST00000440514 IGHV3-49A0A0A0MS15 119 aa13.59□□□□□ -0.23
CPSF4-205ENST00000440514 ZNF785A8K8V0 405 aa13.59□□□□□ -0.23
CPSF4-205ENST00000440514 IGKV1-17P01599 117 aa13.59□□□□□ -0.23
CPSF4-205ENST00000440514 IGLC1P0CG04 106 aa13.59□□□□□ -0.23
CPSF4-205ENST00000440514 GPX4P36969 197 aaPredicted RBP13.59□□□□□ -0.23
CPSF4-205ENST00000440514 GUCA2BQ16661 112 aa13.59□□□□□ -0.23
CPSF4-205ENST00000440514 GSG1LQ6UXU4 331 aa13.59□□□□□ -0.23
CPSF4-205ENST00000440514 TMEM116Q8NCL8 245 aa13.59□□□□□ -0.23
CPSF4-205ENST00000440514 NPIPB3Q92617 1050 aa13.59□□□□□ -0.23
CPSF4-205ENST00000440514 RAB40CQ96S21 281 aa13.59□□□□□ -0.23
CPSF4-205ENST00000440514 GSKIPQ9P0R6 139 aa13.59□□□□□ -0.23
CPSF4-205ENST00000440514 SMAD5-AS1Q9Y6J3 95 aa13.59□□□□□ -0.23
CPSF4-205ENST00000440514 FAM25EA8MYX2 175 aa13.58□□□□□ -0.24
CPSF4-205ENST00000440514 K7EMT4 169 aa13.58□□□□□ -0.24
CPSF4-205ENST00000440514 OR10J1P30954 320 aa13.58□□□□□ -0.24
CPSF4-205ENST00000440514 BMI1P35226 326 aa13.58□□□□□ -0.24
CPSF4-205ENST00000440514 TAS2R30P59541 319 aa13.58□□□□□ -0.24
CPSF4-205ENST00000440514 CYCSP99999 105 aaKnown RBP13.58□□□□□ -0.24
CPSF4-205ENST00000440514 SPANXN5Q5MJ07 72 aa13.58□□□□□ -0.24
CPSF4-205ENST00000440514 Q8N1Y9 231 aa13.58□□□□□ -0.24
CPSF4-205ENST00000440514 IGHV3OR16-13A0A075B7E8 117 aa13.57□□□□□ -0.24
CPSF4-205ENST00000440514 IGHV3-74A0A0B4J1X5 117 aa13.57□□□□□ -0.24
CPSF4-205ENST00000440514 IGHV7-4-1A0A0J9YVY3 117 aa13.57□□□□□ -0.24
CPSF4-205ENST00000440514 C5orf51A6NDU8 294 aa13.57□□□□□ -0.24
CPSF4-205ENST00000440514 FABP1P07148 127 aa13.57□□□□□ -0.24
CPSF4-205ENST00000440514 PVALBP20472 110 aaPredicted RBP13.57□□□□□ -0.24
CPSF4-205ENST00000440514 GTSCR1Q86UQ5 136 aa13.57□□□□□ -0.24
CPSF4-205ENST00000440514 OR1S2Q8NGQ3 325 aa13.57□□□□□ -0.24
CPSF4-205ENST00000440514 SLC35E1Q96K37 410 aa13.57□□□□□ -0.24
CPSF4-205ENST00000440514 B9D2Q9BPU9 175 aa13.57□□□□□ -0.24
CPSF4-205ENST00000440514 RCL1Q9Y2P8 373 aaKnown RBP13.57□□□□□ -0.24
CPSF4-205ENST00000440514 STRAPQ9Y3F4 350 aaKnown RBP13.57□□□□□ -0.24
CPSF4-205ENST00000440514 PRSS46E5RG02 174 aa13.56□□□□□ -0.24
CPSF4-205ENST00000440514 CD81P60033 236 aa13.56□□□□□ -0.24
CPSF4-205ENST00000440514 GAMTQ14353 236 aa13.56□□□□□ -0.24
CPSF4-205ENST00000440514 SMIM8Q96KF7 97 aa13.56□□□□□ -0.24
CPSF4-205ENST00000440514 C2orf50Q96LR7 162 aa13.56□□□□□ -0.24
CPSF4-205ENST00000440514 GINS3Q9BRX5 216 aa13.56□□□□□ -0.24
CPSF4-205ENST00000440514 PSENENQ9NZ42 101 aa13.56□□□□□ -0.24
CPSF4-205ENST00000440514 SMPXQ9UHP9 88 aa13.56□□□□□ -0.24
CPSF4-205ENST00000440514 TRAV14DV4A0A0A6YYC5 116 aa13.55□□□□□ -0.24
CPSF4-205ENST00000440514 CHEK1O14757 476 aa13.55□□□□□ -0.24
CPSF4-205ENST00000440514 MBPP02686 304 aaPredicted RBP13.55□□□□□ -0.24
CPSF4-205ENST00000440514 CD7P09564 240 aa13.55□□□□□ -0.24
CPSF4-205ENST00000440514 RBPMS2Q6ZRY4 209 aaKnown RBP13.55□□□□□ -0.24
CPSF4-205ENST00000440514 RHPN1-AS1Q9BWJ2 59 aa13.55□□□□□ -0.24
CPSF4-205ENST00000440514 TGP01266 2768 aa13.55□□□□□ -0.24
CPSF4-205ENST00000440514 L7N2F9 121 aa13.54□□□□□ -0.24
CPSF4-205ENST00000440514 TSC22D2O75157 780 aa13.54□□□□□ -0.24
CPSF4-205ENST00000440514 CCNKO75909 580 aa13.54□□□□□ -0.24
CPSF4-205ENST00000440514 APOHP02749 345 aaPredicted RBP13.54□□□□□ -0.24
CPSF4-205ENST00000440514 CD5P06127 495 aa13.54□□□□□ -0.24
CPSF4-205ENST00000440514 IGHV4-30-4P0DP06 118 aa13.54□□□□□ -0.24
CPSF4-205ENST00000440514 PAX9P55771 341 aa13.54□□□□□ -0.24
CPSF4-205ENST00000440514 VAMP2P63027 116 aa13.54□□□□□ -0.24
CPSF4-205ENST00000440514 RGS21Q2M5E4 152 aa13.54□□□□□ -0.24
CPSF4-205ENST00000440514 RNF2Q99496 336 aa13.54□□□□□ -0.24
CPSF4-205ENST00000440514 NEURL2Q9BR09 285 aa13.54□□□□□ -0.24
CPSF4-205ENST00000440514 WFDC10AQ9H1F0 79 aa13.54□□□□□ -0.24
CPSF4-205ENST00000440514 IGKV1D-37A0A075B6S9 117 aa13.53□□□□□ -0.24
CPSF4-205ENST00000440514 TRAV25A0A0B4J276 109 aa13.53□□□□□ -0.24
CPSF4-205ENST00000440514 IGHV3-66A0A0C4DH42 116 aa13.53□□□□□ -0.24
CPSF4-205ENST00000440514 SSNA1O43805 119 aa13.53□□□□□ -0.24
CPSF4-205ENST00000440514 FRMD6-AS1P0C7T7 363 aa13.53□□□□□ -0.24
CPSF4-205ENST00000440514 YPEL3P61236 119 aaPredicted RBP13.53□□□□□ -0.24
CPSF4-205ENST00000440514 ST8SIA2Q92186 375 aa13.53□□□□□ -0.24
CPSF4-205ENST00000440514 ASCL2Q99929 193 aa13.53□□□□□ -0.24
CPSF4-205ENST00000440514 PFDN2Q9UHV9 154 aa13.53□□□□□ -0.24
CPSF4-205ENST00000440514 LSM5Q9Y4Y9 91 aaKnown RBP13.53□□□□□ -0.24
CPSF4-205ENST00000440514 ZFP92A6NM28 416 aa13.52□□□□□ -0.25
CPSF4-205ENST00000440514 TOMM40O96008 361 aa13.52□□□□□ -0.25
CPSF4-205ENST00000440514 CFDP00746 253 aaPredicted RBP13.52□□□□□ -0.25
CPSF4-205ENST00000440514 RLN2P04090 185 aa13.52□□□□□ -0.25
CPSF4-205ENST00000440514 S100A7P31151 101 aa13.52□□□□□ -0.25
CPSF4-205ENST00000440514 OR8G2PQ6IF36 304 aa13.52□□□□□ -0.25
CPSF4-205ENST00000440514 ACOT7LQ6ZUV0 252 aa13.52□□□□□ -0.25
CPSF4-205ENST00000440514 Q8WTZ3 238 aa13.52□□□□□ -0.25
CPSF4-205ENST00000440514 NARS2Q96I59 477 aaKnown RBP13.52□□□□□ -0.25
CPSF4-205ENST00000440514 DNAH9Q9NYC9 4486 aa13.51□□□□□ -0.25
CPSF4-205ENST00000440514 K7EPK0 472 aa13.51□□□□□ -0.25
CPSF4-205ENST00000440514 GOSR2O14653 212 aa13.51□□□□□ -0.25
CPSF4-205ENST00000440514 TSPAN4O14817 238 aa13.51□□□□□ -0.25
CPSF4-205ENST00000440514 SIX6O95475 246 aa13.51□□□□□ -0.25
CPSF4-205ENST00000440514 IL4P05112 153 aa13.51□□□□□ -0.25
CPSF4-205ENST00000440514 METTL15P1P0C7V9 234 aa13.51□□□□□ -0.25
CPSF4-205ENST00000440514 S100A10P60903 97 aa13.51□□□□□ -0.25
CPSF4-205ENST00000440514 USF2Q15853 346 aaPredicted RBP13.51□□□□□ -0.25
CPSF4-205ENST00000440514 LAMTOR1Q6IAA8 161 aa13.51□□□□□ -0.25
CPSF4-205ENST00000440514 TMEM14EPQ6UXP3 125 aa13.51□□□□□ -0.25
CPSF4-205ENST00000440514 METTL26Q96S19 204 aa13.51□□□□□ -0.25
CPSF4-205ENST00000440514 SPAG8Q99932 426 aaPredicted RBP13.51□□□□□ -0.25
CPSF4-205ENST00000440514 NMES1Q9C002 83 aa13.51□□□□□ -0.25
CPSF4-205ENST00000440514 TMEM231Q9H6L2 316 aa13.51□□□□□ -0.25
CPSF4-205ENST00000440514 VSIRQ9H7M9 311 aa13.51□□□□□ -0.25
CPSF4-205ENST00000440514 IGKV3-7A0A075B6H7 116 aa13.5□□□□□ -0.25
CPSF4-205ENST00000440514 IGKV1OR2-108A0A075B7D4 117 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms