RNA–Protein interactions for RNA: ENST00000440271.5

TRIM39-210, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-210ENST00000440271 FAM222AQ5U5X8 452 aa14.63□□□□□ -0.07
TRIM39-210ENST00000440271 Q8WTZ3 238 aa14.63□□□□□ -0.07
TRIM39-210ENST00000440271 PDCD10Q9BUL8 212 aa14.63□□□□□ -0.07
TRIM39-210ENST00000440271 NRN1Q9NPD7 142 aa14.63□□□□□ -0.07
TRIM39-210ENST00000440271 RFNGQ9Y644 331 aa14.63□□□□□ -0.07
TRIM39-210ENST00000440271 LRP1BQ9NZR2 4599 aa14.63□□□□□ -0.07
TRIM39-210ENST00000440271 TEX48A0A1B0GUV7 120 aa14.62□□□□□ -0.07
TRIM39-210ENST00000440271 HLA-DRB4P13762 266 aa14.62□□□□□ -0.07
TRIM39-210ENST00000440271 ENY2Q9NPA8 101 aa14.62□□□□□ -0.07
TRIM39-210ENST00000440271 RAB26Q9ULW5 256 aa14.62□□□□□ -0.07
TRIM39-210ENST00000440271 HLA-DRB4X5D2U9 266 aa14.62□□□□□ -0.07
TRIM39-210ENST00000440271 NACAE9PAV3 2078 aa14.61□□□□□ -0.07
TRIM39-210ENST00000440271 IGLC1P0CG04 106 aa14.61□□□□□ -0.07
TRIM39-210ENST00000440271 AKR1C2P52895 323 aa14.61□□□□□ -0.07
TRIM39-210ENST00000440271 FXYD7P58549 80 aa14.61□□□□□ -0.07
TRIM39-210ENST00000440271 BSXQ3C1V8 233 aa14.61□□□□□ -0.07
TRIM39-210ENST00000440271 SAMD12Q8N8I0 201 aa14.61□□□□□ -0.07
TRIM39-210ENST00000440271 IGKV3-20P01619 116 aa14.6□□□□□ -0.07
TRIM39-210ENST00000440271 NKX2-1P43699 371 aaPredicted RBP14.6□□□□□ -0.07
TRIM39-210ENST00000440271 YPEL3P61236 119 aaPredicted RBP14.6□□□□□ -0.07
TRIM39-210ENST00000440271 DHODHQ02127 395 aa14.6□□□□□ -0.07
TRIM39-210ENST00000440271 OXA1LQ15070 435 aa14.6□□□□□ -0.07
TRIM39-210ENST00000440271 USF2Q15853 346 aaPredicted RBP14.6□□□□□ -0.07
TRIM39-210ENST00000440271 GDF5OSQ5U4N7 250 aa14.6□□□□□ -0.07
TRIM39-210ENST00000440271 CROCCP3Q8IVE0 287 aa14.6□□□□□ -0.07
TRIM39-210ENST00000440271 OR1S2Q8NGQ3 325 aa14.6□□□□□ -0.07
TRIM39-210ENST00000440271 GPX8Q8TED1 209 aa14.6□□□□□ -0.07
TRIM39-210ENST00000440271 RPS10-NUDT3A0A1W2PQS6 291 aa14.59□□□□□ -0.07
TRIM39-210ENST00000440271 BUB3O43684 328 aa14.59□□□□□ -0.07
TRIM39-210ENST00000440271 TMEM88Q6PEY1 159 aa14.59□□□□□ -0.07
TRIM39-210ENST00000440271 SIGLEC15Q6ZMC9 328 aa14.59□□□□□ -0.07
TRIM39-210ENST00000440271 TP53RKQ96S44 253 aa14.59□□□□□ -0.07
TRIM39-210ENST00000440271 ATG12O94817 140 aa14.58□□□□□ -0.08
TRIM39-210ENST00000440271 IL4P05112 153 aa14.58□□□□□ -0.08
TRIM39-210ENST00000440271 OR10J1P30954 320 aa14.58□□□□□ -0.08
TRIM39-210ENST00000440271 RND2P52198 227 aa14.58□□□□□ -0.08
TRIM39-210ENST00000440271 FAM3BP58499 235 aaPredicted RBP14.58□□□□□ -0.08
TRIM39-210ENST00000440271 DEFB1P60022 68 aa14.58□□□□□ -0.08
TRIM39-210ENST00000440271 RND3P61587 244 aa14.58□□□□□ -0.08
TRIM39-210ENST00000440271 PRSS54Q6PEW0 395 aa14.58□□□□□ -0.08
TRIM39-210ENST00000440271 Q8N1X5 172 aa14.58□□□□□ -0.08
TRIM39-210ENST00000440271 TMED3Q9Y3Q3 217 aa14.58□□□□□ -0.08
TRIM39-210ENST00000440271 PGAM2P15259 253 aa14.57□□□□□ -0.08
TRIM39-210ENST00000440271 PI3P19957 117 aa14.57□□□□□ -0.08
TRIM39-210ENST00000440271 SLC25A4P12235 298 aa14.56□□□□□ -0.08
TRIM39-210ENST00000440271 TGFBR1P36897 503 aa14.56□□□□□ -0.08
TRIM39-210ENST00000440271 HTR2BP41595 481 aa14.56□□□□□ -0.08
TRIM39-210ENST00000440271 PIGPP57054 158 aa14.56□□□□□ -0.08
TRIM39-210ENST00000440271 ZNF709Q8N972 641 aa14.56□□□□□ -0.08
TRIM39-210ENST00000440271 ZNF486Q96H40 463 aaPredicted RBP14.56□□□□□ -0.08
TRIM39-210ENST00000440271 YTHDF1Q9BYJ9 559 aaKnown RBP14.56□□□□□ -0.08
TRIM39-210ENST00000440271 SAV1Q9H4B6 383 aaPredicted RBP14.56□□□□□ -0.08
TRIM39-210ENST00000440271 YTHDF2Q9Y5A9 579 aaKnown RBP14.56□□□□□ -0.08
TRIM39-210ENST00000440271 A0A0G2JRQ6 117 aa14.55□□□□□ -0.08
TRIM39-210ENST00000440271 C3orf85A0A1B0GTC6 90 aa14.55□□□□□ -0.08
TRIM39-210ENST00000440271 GSTZ1O43708 216 aaPredicted RBP14.55□□□□□ -0.08
TRIM39-210ENST00000440271 RPS19P39019 145 aaKnown RBP14.55□□□□□ -0.08
TRIM39-210ENST00000440271 CLUHP3Q96NS8 147 aa14.55□□□□□ -0.08
TRIM39-210ENST00000440271 SCPEP1Q9HB40 452 aa14.55□□□□□ -0.08
TRIM39-210ENST00000440271 LOC102723971A0A1B0GUV8 181 aa14.54□□□□□ -0.08
TRIM39-210ENST00000440271 M0QYG6 137 aa14.54□□□□□ -0.08
TRIM39-210ENST00000440271 HBE1P02100 147 aa14.54□□□□□ -0.08
TRIM39-210ENST00000440271 RD3LP0DJH9 198 aa14.54□□□□□ -0.08
TRIM39-210ENST00000440271 RCVRNP35243 200 aa14.54□□□□□ -0.08
TRIM39-210ENST00000440271 SPCS3P61009 180 aa14.54□□□□□ -0.08
TRIM39-210ENST00000440271 TRIM16LQ309B1 348 aa14.54□□□□□ -0.08
TRIM39-210ENST00000440271 SP6Q3SY56 376 aa14.54□□□□□ -0.08
TRIM39-210ENST00000440271 FOXI2Q6ZQN5 318 aa14.54□□□□□ -0.08
TRIM39-210ENST00000440271 C1orf158Q8N1D5 194 aa14.54□□□□□ -0.08
TRIM39-210ENST00000440271 C6orf223Q8N319 242 aa14.54□□□□□ -0.08
TRIM39-210ENST00000440271 C15orf53Q8NAA6 179 aa14.54□□□□□ -0.08
TRIM39-210ENST00000440271 RRNAD1Q96FB5 475 aaKnown RBP14.54□□□□□ -0.08
TRIM39-210ENST00000440271 LINC00052Q96N35 136 aa14.54□□□□□ -0.08
TRIM39-210ENST00000440271 ATG101Q9BSB4 218 aa14.54□□□□□ -0.08
TRIM39-210ENST00000440271 SLC35B3Q9H1N7 401 aa14.54□□□□□ -0.08
TRIM39-210ENST00000440271 GOLT1BQ9Y3E0 138 aa14.54□□□□□ -0.08
TRIM39-210ENST00000440271 HERC1Q15751 4861 aa14.53□□□□□ -0.08
TRIM39-210ENST00000440271 APOBP04114 4563 aaKnown RBP14.53□□□□□ -0.08
TRIM39-210ENST00000440271 NBDYA0A0U1RRE5 68 aa14.53□□□□□ -0.08
TRIM39-210ENST00000440271 DAD1P61803 113 aa14.53□□□□□ -0.08
TRIM39-210ENST00000440271 C2orf83Q53S99 150 aa14.53□□□□□ -0.08
TRIM39-210ENST00000440271 OR4B1Q8NGF8 309 aa14.53□□□□□ -0.08
TRIM39-210ENST00000440271 RNASEH2CQ8TDP1 164 aaKnown RBP14.53□□□□□ -0.08
TRIM39-210ENST00000440271 NPIPB3Q92617 1050 aa14.53□□□□□ -0.08
TRIM39-210ENST00000440271 SCRT2Q9NQ03 307 aa14.53□□□□□ -0.08
TRIM39-210ENST00000440271 HEYLQ9NQ87 328 aaPredicted RBP14.53□□□□□ -0.08
TRIM39-210ENST00000440271 NXPH3O95157 252 aa14.52□□□□□ -0.09
TRIM39-210ENST00000440271 TOMM40O96008 361 aa14.52□□□□□ -0.09
TRIM39-210ENST00000440271 NEDD8Q15843 81 aa14.52□□□□□ -0.09
TRIM39-210ENST00000440271 AARDQ4LEZ3 155 aa14.52□□□□□ -0.09
TRIM39-210ENST00000440271 GSG1LQ6UXU4 331 aa14.52□□□□□ -0.09
TRIM39-210ENST00000440271 SNX29P2Q8IUI4 249 aa14.52□□□□□ -0.09
TRIM39-210ENST00000440271 OR52E5Q8NH55 327 aa14.52□□□□□ -0.09
TRIM39-210ENST00000440271 RNASE11Q8TAA1 199 aaKnown RBP14.52□□□□□ -0.09
TRIM39-210ENST00000440271 C7orf50Q9BRJ6 194 aaKnown RBP14.52□□□□□ -0.09
TRIM39-210ENST00000440271 WDR12Q9GZL7 423 aaKnown RBP14.52□□□□□ -0.09
TRIM39-210ENST00000440271 KLK11Q9UBX7 282 aa14.52□□□□□ -0.09
TRIM39-210ENST00000440271 SMIM31A0A1B0GVY4 71 aa14.51□□□□□ -0.09
TRIM39-210ENST00000440271 ID1P41134 155 aa14.51□□□□□ -0.09
TRIM39-210ENST00000440271 PSG9Q00887 426 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms