RNA–Protein interactions for RNA: ENST00000439717.2

HSPG2-206, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 637 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-206ENST00000439717 FAM25EA8MYX2 175 aa8.92□□□□□ -0.98
HSPG2-206ENST00000439717 CCSO14618 274 aa8.92□□□□□ -0.98
HSPG2-206ENST00000439717 SSSCA1O60232 199 aa8.92□□□□□ -0.98
HSPG2-206ENST00000439717 SCGB1D2O95969 90 aa8.92□□□□□ -0.98
HSPG2-206ENST00000439717 IGKV1-17P01599 117 aa8.92□□□□□ -0.98
HSPG2-206ENST00000439717 IGLC1P0CG04 106 aa8.92□□□□□ -0.98
HSPG2-206ENST00000439717 OR10J1P30954 320 aa8.92□□□□□ -0.98
HSPG2-206ENST00000439717 TAS2R30P59541 319 aa8.92□□□□□ -0.98
HSPG2-206ENST00000439717 YPEL3P61236 119 aaPredicted RBP8.92□□□□□ -0.98
HSPG2-206ENST00000439717 TIGITQ495A1 244 aa8.92□□□□□ -0.98
HSPG2-206ENST00000439717 SPANXN5Q5MJ07 72 aa8.92□□□□□ -0.98
HSPG2-206ENST00000439717 BTNL8Q6UX41 500 aa8.92□□□□□ -0.98
HSPG2-206ENST00000439717 ACY3Q96HD9 319 aa8.92□□□□□ -0.98
HSPG2-206ENST00000439717 SLC35E1Q96K37 410 aa8.92□□□□□ -0.98
HSPG2-206ENST00000439717 C2orf50Q96LR7 162 aa8.92□□□□□ -0.98
HSPG2-206ENST00000439717 ZFAND3Q9H8U3 227 aa8.92□□□□□ -0.98
HSPG2-206ENST00000439717 PSENENQ9NZ42 101 aa8.92□□□□□ -0.98
HSPG2-206ENST00000439717 SMPXQ9UHP9 88 aa8.92□□□□□ -0.98
HSPG2-206ENST00000439717 PAIP2BQ9ULR5 123 aaKnown RBP8.92□□□□□ -0.98
HSPG2-206ENST00000439717 PUS1Q9Y606 427 aaKnown RBP eCLIP8.92□□□□□ -0.98
HSPG2-206ENST00000439717 SMAD5-AS1Q9Y6J3 95 aa8.92□□□□□ -0.98
HSPG2-206ENST00000439717 IGHV3OR16-8A0A075B7F1 116 aa8.91□□□□□ -0.98
HSPG2-206ENST00000439717 IGHV7-4-1A0A0J9YVY3 117 aa8.91□□□□□ -0.98
HSPG2-206ENST00000439717 ZNF785A8K8V0 405 aa8.91□□□□□ -0.98
HSPG2-206ENST00000439717 ZNF207O43670 478 aaKnown RBP8.91□□□□□ -0.98
HSPG2-206ENST00000439717 MBPP02686 304 aaPredicted RBP8.91□□□□□ -0.98
HSPG2-206ENST00000439717 BMI1P35226 326 aa8.91□□□□□ -0.98
HSPG2-206ENST00000439717 GAMTQ14353 236 aa8.91□□□□□ -0.98
HSPG2-206ENST00000439717 LAMTOR1Q6IAA8 161 aa8.91□□□□□ -0.98
HSPG2-206ENST00000439717 RBPMS2Q6ZRY4 209 aaKnown RBP8.91□□□□□ -0.98
HSPG2-206ENST00000439717 GTSCR1Q86UQ5 136 aa8.91□□□□□ -0.98
HSPG2-206ENST00000439717 Q8WTZ3 238 aa8.91□□□□□ -0.98
HSPG2-206ENST00000439717 PRSS46E5RG02 174 aa8.9□□□□□ -0.98
HSPG2-206ENST00000439717 H3BP45 60 aa8.9□□□□□ -0.98
HSPG2-206ENST00000439717 CHEK1O14757 476 aa8.9□□□□□ -0.98
HSPG2-206ENST00000439717 TSC22D2O75157 780 aa8.9□□□□□ -0.98
HSPG2-206ENST00000439717 PTTG1O95997 202 aa8.9□□□□□ -0.98
HSPG2-206ENST00000439717 PAX9P55771 341 aa8.9□□□□□ -0.98
HSPG2-206ENST00000439717 TMEM14EPQ6UXP3 125 aa8.9□□□□□ -0.98
HSPG2-206ENST00000439717 TMEM61Q8N0U2 210 aa8.9□□□□□ -0.98
HSPG2-206ENST00000439717 Q8N1Y9 231 aa8.9□□□□□ -0.98
HSPG2-206ENST00000439717 WDR89Q96FK6 387 aaPredicted RBP8.9□□□□□ -0.98
HSPG2-206ENST00000439717 RCL1Q9Y2P8 373 aaKnown RBP8.9□□□□□ -0.98
HSPG2-206ENST00000439717 ZFP92A6NM28 416 aa8.89□□□□□ -0.99
HSPG2-206ENST00000439717 L7N2F9 121 aa8.89□□□□□ -0.99
HSPG2-206ENST00000439717 TSPAN4O14817 238 aa8.89□□□□□ -0.99
HSPG2-206ENST00000439717 SCAF4O95104 1147 aaKnown RBP8.89□□□□□ -0.99
HSPG2-206ENST00000439717 TOMM40O96008 361 aa8.89□□□□□ -0.99
HSPG2-206ENST00000439717 CD5P06127 495 aa8.89□□□□□ -0.99
HSPG2-206ENST00000439717 FABP1P07148 127 aa8.89□□□□□ -0.99
HSPG2-206ENST00000439717 RD3LP0DJH9 198 aa8.89□□□□□ -0.99
HSPG2-206ENST00000439717 NPPCP23582 126 aa8.89□□□□□ -0.99
HSPG2-206ENST00000439717 VAMP2P63027 116 aa8.89□□□□□ -0.99
HSPG2-206ENST00000439717 IL15RAQ13261 267 aa8.89□□□□□ -0.99
HSPG2-206ENST00000439717 GUCA2BQ16661 112 aa8.89□□□□□ -0.99
HSPG2-206ENST00000439717 THAP8Q8NA92 274 aa8.89□□□□□ -0.99
HSPG2-206ENST00000439717 METTL26Q96S19 204 aa8.89□□□□□ -0.99
HSPG2-206ENST00000439717 SPAG8Q99932 426 aaPredicted RBP8.89□□□□□ -0.99
HSPG2-206ENST00000439717 B9D2Q9BPU9 175 aa8.89□□□□□ -0.99
HSPG2-206ENST00000439717 RHPN1-AS1Q9BWJ2 59 aa8.89□□□□□ -0.99
HSPG2-206ENST00000439717 TMEM231Q9H6L2 316 aa8.89□□□□□ -0.99
HSPG2-206ENST00000439717 VSIRQ9H7M9 311 aa8.89□□□□□ -0.99
HSPG2-206ENST00000439717 SORL1Q92673 2214 aa8.88□□□□□ -0.99
HSPG2-206ENST00000439717 IGKV1D-37A0A075B6S9 117 aa8.88□□□□□ -0.99
HSPG2-206ENST00000439717 A0A1W2PS18 150 aa8.88□□□□□ -0.99
HSPG2-206ENST00000439717 C7orf66A4D0T2 115 aa8.88□□□□□ -0.99
HSPG2-206ENST00000439717 PMS2P5A8MQ11 134 aa8.88□□□□□ -0.99
HSPG2-206ENST00000439717 A8MZ25 164 aa8.88□□□□□ -0.99
HSPG2-206ENST00000439717 K7EPK0 472 aa8.88□□□□□ -0.99
HSPG2-206ENST00000439717 PVALBP20472 110 aaPredicted RBP8.88□□□□□ -0.99
HSPG2-206ENST00000439717 CRYBB3P26998 211 aa8.88□□□□□ -0.99
HSPG2-206ENST00000439717 NARS2Q96I59 477 aaKnown RBP8.88□□□□□ -0.99
HSPG2-206ENST00000439717 TRGV9Q99603 122 aa8.88□□□□□ -0.99
HSPG2-206ENST00000439717 NEURL2Q9BR09 285 aa8.88□□□□□ -0.99
HSPG2-206ENST00000439717 LSM5Q9Y4Y9 91 aaKnown RBP8.88□□□□□ -0.99
HSPG2-206ENST00000439717 IGHV3-49A0A0A0MS15 119 aa8.87□□□□□ -0.99
HSPG2-206ENST00000439717 FNDC10F2Z333 226 aa8.87□□□□□ -0.99
HSPG2-206ENST00000439717 GOSR2O14653 212 aa8.87□□□□□ -0.99
HSPG2-206ENST00000439717 CFDP00746 253 aaPredicted RBP8.87□□□□□ -0.99
HSPG2-206ENST00000439717 METTL15P1P0C7V9 234 aa8.87□□□□□ -0.99
HSPG2-206ENST00000439717 PSG1P11464 419 aa8.87□□□□□ -0.99
HSPG2-206ENST00000439717 CD81P60033 236 aa8.87□□□□□ -0.99
HSPG2-206ENST00000439717 DLK1P80370 383 aa8.87□□□□□ -0.99
HSPG2-206ENST00000439717 CYCSP99999 105 aaKnown RBP8.87□□□□□ -0.99
HSPG2-206ENST00000439717 OR8G2PQ6IF36 304 aa8.87□□□□□ -0.99
HSPG2-206ENST00000439717 ACOT7LQ6ZUV0 252 aa8.87□□□□□ -0.99
HSPG2-206ENST00000439717 OR10P1Q8NGE3 313 aa8.87□□□□□ -0.99
HSPG2-206ENST00000439717 OR51G1Q8NGK1 321 aa8.87□□□□□ -0.99
HSPG2-206ENST00000439717 ST8SIA2Q92186 375 aa8.87□□□□□ -0.99
HSPG2-206ENST00000439717 RNF2Q99496 336 aa8.87□□□□□ -0.99
HSPG2-206ENST00000439717 GGACTQ9BVM4 153 aa8.87□□□□□ -0.99
HSPG2-206ENST00000439717 NMES1Q9C002 83 aa8.87□□□□□ -0.99
HSPG2-206ENST00000439717 C11orf1Q9H5F2 150 aa8.87□□□□□ -0.99
HSPG2-206ENST00000439717 SELENOKQ9Y6D0 94 aa8.87□□□□□ -0.99
HSPG2-206ENST00000439717 SSNA1O43805 119 aa8.86□□□□□ -0.99
HSPG2-206ENST00000439717 APOHP02749 345 aaPredicted RBP8.86□□□□□ -0.99
HSPG2-206ENST00000439717 IL4P05112 153 aa8.86□□□□□ -0.99
HSPG2-206ENST00000439717 HNRNPCP07910 306 aaKnown RBP eCLIP8.86□□□□□ -0.99
HSPG2-206ENST00000439717 CD7P09564 240 aa8.86□□□□□ -0.99
HSPG2-206ENST00000439717 NHLRC4P0CG21 123 aaPredicted RBP8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms