RNA–Protein interactions for RNA: ENST00000439185.1

UPP2-IT1-201, UPP2 intronic transcript 1, humanhuman

TSL 3 BASIC

Gene UPP2-IT1, Length 357 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPP2-IT1-201ENST00000439185 NAV2Q8IVL1 2488 aa0.24□□□□□ -2.37
UPP2-IT1-201ENST00000439185 HECW1Q76N89 1606 aa0.24□□□□□ -2.37
UPP2-IT1-201ENST00000439185 NEO1Q92859 1461 aa0.23□□□□□ -2.37
UPP2-IT1-201ENST00000439185 PLXND1Q9Y4D7 1925 aa0.23□□□□□ -2.37
UPP2-IT1-201ENST00000439185 CCL25O15444 150 aa0.23□□□□□ -2.37
UPP2-IT1-201ENST00000439185 CRYZL1O95825 349 aa0.23□□□□□ -2.37
UPP2-IT1-201ENST00000439185 PRH1P02810 166 aa0.23□□□□□ -2.37
UPP2-IT1-201ENST00000439185 SMIM10L2AP0DMW4 78 aa0.23□□□□□ -2.37
UPP2-IT1-201ENST00000439185 SMIM10L2BP0DMW5 78 aa0.23□□□□□ -2.37
UPP2-IT1-201ENST00000439185 S100A4P26447 101 aaKnown RBP0.23□□□□□ -2.37
UPP2-IT1-201ENST00000439185 SULT1A1P50225 295 aa0.23□□□□□ -2.37
UPP2-IT1-201ENST00000439185 PSG9Q00887 426 aa0.23□□□□□ -2.37
UPP2-IT1-201ENST00000439185 LINC01554Q52M75 96 aa0.23□□□□□ -2.37
UPP2-IT1-201ENST00000439185 CDKL4Q5MAI5 379 aa0.23□□□□□ -2.37
UPP2-IT1-201ENST00000439185 TEX47Q8TBZ9 253 aa0.23□□□□□ -2.37
UPP2-IT1-201ENST00000439185 OR51V1Q9H2C8 321 aa0.23□□□□□ -2.37
UPP2-IT1-201ENST00000439185 EPDR1Q9UM22 224 aa0.23□□□□□ -2.37
UPP2-IT1-201ENST00000439185 HECW2Q9P2P5 1572 aa0.23□□□□□ -2.37
UPP2-IT1-201ENST00000439185 KIAA1549Q9HCM3 1950 aa0.23□□□□□ -2.37
UPP2-IT1-201ENST00000439185 NAV3Q8IVL0 2385 aa0.23□□□□□ -2.37
UPP2-IT1-201ENST00000439185 FRAS1Q86XX4 4008 aa0.22□□□□□ -2.37
UPP2-IT1-201ENST00000439185 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP0.22□□□□□ -2.37
UPP2-IT1-201ENST00000439185 C7orf71A4D174 169 aa0.22□□□□□ -2.37
UPP2-IT1-201ENST00000439185 OR4C46A6NHA9 309 aa0.22□□□□□ -2.37
UPP2-IT1-201ENST00000439185 IFNA5P01569 189 aa0.22□□□□□ -2.37
UPP2-IT1-201ENST00000439185 OR4E1P0C645 316 aa0.22□□□□□ -2.37
UPP2-IT1-201ENST00000439185 YPEL3P61236 119 aaPredicted RBP0.22□□□□□ -2.37
UPP2-IT1-201ENST00000439185 ESRGQ1W209 222 aa0.22□□□□□ -2.37
UPP2-IT1-201ENST00000439185 SPRNQ5BIV9 151 aa0.22□□□□□ -2.37
UPP2-IT1-201ENST00000439185 CCDC122Q5T0U0 273 aa0.22□□□□□ -2.37
UPP2-IT1-201ENST00000439185 CLECL1Q8IZS7 167 aa0.22□□□□□ -2.37
UPP2-IT1-201ENST00000439185 PATE1Q8WXA2 126 aa0.22□□□□□ -2.37
UPP2-IT1-201ENST00000439185 V9GYY5 206 aaPredicted RBP0.22□□□□□ -2.37
UPP2-IT1-201ENST00000439185 KMT2DO14686 5537 aa0.21□□□□□ -2.38
UPP2-IT1-201ENST00000439185 SCN10AQ9Y5Y9 1956 aa0.21□□□□□ -2.38
UPP2-IT1-201ENST00000439185 MYO3BQ8WXR4 1341 aa0.21□□□□□ -2.38
UPP2-IT1-201ENST00000439185 TRAV26-2A0A0B4J265 109 aa0.21□□□□□ -2.38
UPP2-IT1-201ENST00000439185 PIRO00625 290 aa0.21□□□□□ -2.38
UPP2-IT1-201ENST00000439185 CHP2O43745 196 aa0.21□□□□□ -2.38
UPP2-IT1-201ENST00000439185 DNAL4O96015 105 aa0.21□□□□□ -2.38
UPP2-IT1-201ENST00000439185 RBP1P09455 135 aa0.21□□□□□ -2.38
UPP2-IT1-201ENST00000439185 NKX2-5P52952 324 aaPredicted RBP0.21□□□□□ -2.38
UPP2-IT1-201ENST00000439185 DEFA1P59665 94 aa0.21□□□□□ -2.38
UPP2-IT1-201ENST00000439185 COTL1Q14019 142 aa0.21□□□□□ -2.38
UPP2-IT1-201ENST00000439185 BRMS1LQ5PSV4 323 aa0.21□□□□□ -2.38
UPP2-IT1-201ENST00000439185 LINC00322Q6ZN03 302 aaPredicted RBP0.21□□□□□ -2.38
UPP2-IT1-201ENST00000439185 LCA10Q71F78 164 aa0.21□□□□□ -2.38
UPP2-IT1-201ENST00000439185 GKN2Q86XP6 184 aa0.21□□□□□ -2.38
UPP2-IT1-201ENST00000439185 LINC00301Q8NCQ3 95 aa0.21□□□□□ -2.38
UPP2-IT1-201ENST00000439185 DCUN1D1Q96GG9 259 aa0.21□□□□□ -2.38
UPP2-IT1-201ENST00000439185 SMR3AQ99954 134 aa0.21□□□□□ -2.38
UPP2-IT1-201ENST00000439185 CYSLTR1Q9Y271 337 aa0.21□□□□□ -2.38
UPP2-IT1-201ENST00000439185 MED1Q15648 1581 aaPredicted RBP0.2□□□□□ -2.38
UPP2-IT1-201ENST00000439185 CCL16O15467 120 aa0.2□□□□□ -2.38
UPP2-IT1-201ENST00000439185 TTRP02766 147 aa0.2□□□□□ -2.38
UPP2-IT1-201ENST00000439185 TSNQ15631 228 aaKnown RBP0.2□□□□□ -2.38
UPP2-IT1-201ENST00000439185 FAM74A1Q5RGS3 127 aa0.2□□□□□ -2.38
UPP2-IT1-201ENST00000439185 CCDC90BQ9GZT6 254 aa0.2□□□□□ -2.38
UPP2-IT1-201ENST00000439185 C14orf132Q9NPU4 83 aa0.2□□□□□ -2.38
UPP2-IT1-201ENST00000439185 VPS29Q9UBQ0 182 aa0.2□□□□□ -2.38
UPP2-IT1-201ENST00000439185 ROBO3Q96MS0 1386 aa0.19□□□□□ -2.38
UPP2-IT1-201ENST00000439185 ALPK3Q96L96 1907 aa0.19□□□□□ -2.38
UPP2-IT1-201ENST00000439185 CACNA1EQ15878 2313 aa0.19□□□□□ -2.38
UPP2-IT1-201ENST00000439185 A0A087X0T9 212 aa0.19□□□□□ -2.38
UPP2-IT1-201ENST00000439185 TRBV6-4A0A1B0GX49 114 aa0.19□□□□□ -2.38
UPP2-IT1-201ENST00000439185 M0R036 132 aa0.19□□□□□ -2.38
UPP2-IT1-201ENST00000439185 IFNA16P05015 189 aa0.19□□□□□ -2.38
UPP2-IT1-201ENST00000439185 SERPINA6P08185 405 aa0.19□□□□□ -2.38
UPP2-IT1-201ENST00000439185 KRT222Q8N1A0 295 aa0.19□□□□□ -2.38
UPP2-IT1-201ENST00000439185 HIST1H2BLQ99880 126 aa0.19□□□□□ -2.38
UPP2-IT1-201ENST00000439185 C6orf62Q9GZU0 229 aaPredicted RBP0.19□□□□□ -2.38
UPP2-IT1-201ENST00000439185 TMEM14CQ9P0S9 112 aa0.19□□□□□ -2.38
UPP2-IT1-201ENST00000439185 MAST4O15021 2626 aa0.19□□□□□ -2.38
UPP2-IT1-201ENST00000439185 HEATR1Q9H583 2144 aaKnown RBP0.19□□□□□ -2.38
UPP2-IT1-201ENST00000439185 FAM236DA0A1B0GTK5 79 aa0.18□□□□□ -2.38
UPP2-IT1-201ENST00000439185 AHSA1O95433 338 aa0.18□□□□□ -2.38
UPP2-IT1-201ENST00000439185 FAM236CP0DP71 79 aa0.18□□□□□ -2.38
UPP2-IT1-201ENST00000439185 CASP1P29466 404 aa0.18□□□□□ -2.38
UPP2-IT1-201ENST00000439185 C12orf45Q8N5I9 185 aaPredicted RBP0.18□□□□□ -2.38
UPP2-IT1-201ENST00000439185 OR8D4Q8NGM9 314 aa0.18□□□□□ -2.38
UPP2-IT1-201ENST00000439185 DDI1Q8WTU0 396 aa0.18□□□□□ -2.38
UPP2-IT1-201ENST00000439185 C8orf76Q96K31 380 aa0.18□□□□□ -2.38
UPP2-IT1-201ENST00000439185 UBAP1Q9NZ09 502 aa0.18□□□□□ -2.38
UPP2-IT1-201ENST00000439185 UTP11Q9Y3A2 253 aaKnown RBP0.18□□□□□ -2.38
UPP2-IT1-201ENST00000439185 CHCHD2Q9Y6H1 151 aaPredicted RBP0.18□□□□□ -2.38
UPP2-IT1-201ENST00000439185 MYO18AQ92614 2054 aaKnown RBP0.18□□□□□ -2.38
UPP2-IT1-201ENST00000439185 MYH10P35580 1976 aa0.17□□□□□ -2.38
UPP2-IT1-201ENST00000439185 CLDN24A6NM45 220 aa0.17□□□□□ -2.38
UPP2-IT1-201ENST00000439185 ZNF682O95780 498 aa0.17□□□□□ -2.38
UPP2-IT1-201ENST00000439185 DHFRP00374 187 aa0.17□□□□□ -2.38
UPP2-IT1-201ENST00000439185 ANP32AP39687 249 aaKnown RBP0.17□□□□□ -2.38
UPP2-IT1-201ENST00000439185 CLDN22Q8N7P3 220 aa0.17□□□□□ -2.38
UPP2-IT1-201ENST00000439185 PLPP5Q8NEB5 264 aa0.17□□□□□ -2.38
UPP2-IT1-201ENST00000439185 OR2T10Q8NGZ9 312 aa0.17□□□□□ -2.38
UPP2-IT1-201ENST00000439185 WFDC5Q8TCV5 224 aa0.17□□□□□ -2.38
UPP2-IT1-201ENST00000439185 ADAT3Q96EY9 351 aaPredicted RBP0.17□□□□□ -2.38
UPP2-IT1-201ENST00000439185 C2orf50Q96LR7 162 aa0.17□□□□□ -2.38
UPP2-IT1-201ENST00000439185 TLNRD1Q9H1K6 362 aa0.17□□□□□ -2.38
UPP2-IT1-201ENST00000439185 BCL2L10Q9HD36 194 aa0.17□□□□□ -2.38
UPP2-IT1-201ENST00000439185 CITO14578 2027 aa0.16□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms