RNA–Protein interactions for RNA: ENST00000439160.6

TCOF1-205, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,644 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-205ENST00000439160 GGTLC1Q9BX51 225 aa10.08□□□□□ -0.8
TCOF1-205ENST00000439160 CKS2P33552 79 aa10.08□□□□□ -0.8
TCOF1-205ENST00000439160 MAS1LP35410 378 aa10.08□□□□□ -0.8
TCOF1-205ENST00000439160 DLX1P56177 255 aa10.08□□□□□ -0.8
TCOF1-205ENST00000439160 ERVK11-1P61568 191 aa10.08□□□□□ -0.8
TCOF1-205ENST00000439160 HIST1H1AQ02539 215 aaPredicted RBP10.08□□□□□ -0.8
TCOF1-205ENST00000439160 VMO1Q7Z5L0 202 aa10.08□□□□□ -0.8
TCOF1-205ENST00000439160 MAP1LC3CQ9BXW4 147 aa10.08□□□□□ -0.8
TCOF1-205ENST00000439160 ZNF257Q9Y2Q1 563 aa10.08□□□□□ -0.8
TCOF1-205ENST00000439160 IGHV3OR16-12A0A075B7B8 117 aa10.08□□□□□ -0.8
TCOF1-205ENST00000439160 H0YJW9 148 aa10.08□□□□□ -0.8
TCOF1-205ENST00000439160 RHOGP84095 191 aa10.08□□□□□ -0.8
TCOF1-205ENST00000439160 BRD3OSQ6XYD6 125 aa10.08□□□□□ -0.8
TCOF1-205ENST00000439160 BPESC1Q9GZL8 116 aa10.08□□□□□ -0.8
TCOF1-205ENST00000439160 COL4A4P53420 1690 aaPredicted RBP10.07□□□□□ -0.8
TCOF1-205ENST00000439160 TCRBV4S1A1TA0A5B7 111 aa10.07□□□□□ -0.8
TCOF1-205ENST00000439160 GPX1P07203 203 aa10.07□□□□□ -0.8
TCOF1-205ENST00000439160 RNF224P0DH78 156 aa10.07□□□□□ -0.8
TCOF1-205ENST00000439160 RPL23P62829 140 aaKnown RBP10.07□□□□□ -0.8
TCOF1-205ENST00000439160 TEX29Q8N6K0 151 aa10.07□□□□□ -0.8
TCOF1-205ENST00000439160 CBY1Q9Y3M2 126 aa10.07□□□□□ -0.8
TCOF1-205ENST00000439160 MUC21A0A0G2JKD1 596 aa10.07□□□□□ -0.8
TCOF1-205ENST00000439160 MUC21A0A140T8X8 626 aa10.07□□□□□ -0.8
TCOF1-205ENST00000439160 ADCYAP1P18509 176 aa10.07□□□□□ -0.8
TCOF1-205ENST00000439160 GNG5P63218 68 aa10.07□□□□□ -0.8
TCOF1-205ENST00000439160 MUC21Q5SSG8 566 aa10.07□□□□□ -0.8
TCOF1-205ENST00000439160 HLA-DRB1P01911 266 aa10.07□□□□□ -0.8
TCOF1-205ENST00000439160 RNF125Q96EQ8 232 aa10.07□□□□□ -0.8
TCOF1-205ENST00000439160 TRAV5A0A0B4J249 113 aa10.06□□□□□ -0.8
TCOF1-205ENST00000439160 FOXA3P55318 350 aaPredicted RBP10.06□□□□□ -0.8
TCOF1-205ENST00000439160 SRSF4Q08170 494 aaKnown RBP10.06□□□□□ -0.8
TCOF1-205ENST00000439160 Q9H3A6 140 aa10.06□□□□□ -0.8
TCOF1-205ENST00000439160 A0A0G2JLM5 398 aa10.06□□□□□ -0.8
TCOF1-205ENST00000439160 TCTAP57738 103 aa10.06□□□□□ -0.8
TCOF1-205ENST00000439160 DIRC3C9JPN6 131 aa10.06□□□□□ -0.8
TCOF1-205ENST00000439160 WISP2O76076 250 aa10.06□□□□□ -0.8
TCOF1-205ENST00000439160 GCGP01275 180 aa10.06□□□□□ -0.8
TCOF1-205ENST00000439160 CD99P14209 185 aa10.06□□□□□ -0.8
TCOF1-205ENST00000439160 TPTE2P1Q5T6R2 138 aa10.06□□□□□ -0.8
TCOF1-205ENST00000439160 ANAPC10Q9UM13 185 aa10.06□□□□□ -0.8
TCOF1-205ENST00000439160 MLANAQ16655 118 aa10.06□□□□□ -0.8
TCOF1-205ENST00000439160 SPATA31B1PQ5VZV4 182 aa10.06□□□□□ -0.8
TCOF1-205ENST00000439160 OR4C5Q8NGB2 326 aa10.06□□□□□ -0.8
TCOF1-205ENST00000439160 MBD3L1Q8WWY6 194 aa10.06□□□□□ -0.8
TCOF1-205ENST00000439160 PHLDA3Q9Y5J5 127 aa10.06□□□□□ -0.8
TCOF1-205ENST00000439160 MKI67P46013 3256 aaKnown RBP10.05□□□□□ -0.8
TCOF1-205ENST00000439160 CD5P06127 495 aa10.05□□□□□ -0.8
TCOF1-205ENST00000439160 HOXA5P20719 270 aa10.05□□□□□ -0.8
TCOF1-205ENST00000439160 TMEM167AQ8TBQ9 72 aa10.05□□□□□ -0.8
TCOF1-205ENST00000439160 IMMP2LQ96T52 175 aa10.05□□□□□ -0.8
TCOF1-205ENST00000439160 SEPSECSQ9HD40 501 aaKnown RBP10.05□□□□□ -0.8
TCOF1-205ENST00000439160 BUB1B-PAK6H3BSN5 160 aa10.05□□□□□ -0.8
TCOF1-205ENST00000439160 CYYR1Q96J86 154 aa10.05□□□□□ -0.8
TCOF1-205ENST00000439160 GATA4P43694 442 aa10.05□□□□□ -0.8
TCOF1-205ENST00000439160 SAPCD1Q5SSQ6 148 aa10.05□□□□□ -0.8
TCOF1-205ENST00000439160 IGFL2Q6UWQ7 119 aa10.05□□□□□ -0.8
TCOF1-205ENST00000439160 RNASE7Q9H1E1 156 aaKnown RBP10.05□□□□□ -0.8
TCOF1-205ENST00000439160 DKK4Q9UBT3 224 aa10.05□□□□□ -0.8
TCOF1-205ENST00000439160 C15orf62A8K5M9 175 aa10.05□□□□□ -0.8
TCOF1-205ENST00000439160 C2orf83Q53S99 150 aa10.05□□□□□ -0.8
TCOF1-205ENST00000439160 GSX1Q9H4S2 264 aaPredicted RBP10.05□□□□□ -0.8
TCOF1-205ENST00000439160 ZNF106Q9H2Y7 1883 aaKnown RBP10.04□□□□□ -0.8
TCOF1-205ENST00000439160 CYB5R2Q6BCY4 276 aa10.04□□□□□ -0.8
TCOF1-205ENST00000439160 LAMA2P24043 3122 aaKnown RBP10.04□□□□□ -0.8
TCOF1-205ENST00000439160 IGLV3-9A0A075B6K5 115 aa10.04□□□□□ -0.8
TCOF1-205ENST00000439160 GGCTO75223 188 aaKnown RBP10.04□□□□□ -0.8
TCOF1-205ENST00000439160 TMEM50AO95807 157 aa10.04□□□□□ -0.8
TCOF1-205ENST00000439160 HSPB8Q9UJY1 196 aa10.04□□□□□ -0.8
TCOF1-205ENST00000439160 ZNF841Q6ZN19 808 aa10.04□□□□□ -0.8
TCOF1-205ENST00000439160 MGST2Q99735 147 aa10.04□□□□□ -0.8
TCOF1-205ENST00000439160 C9JQL5 133 aa10.03□□□□□ -0.8
TCOF1-205ENST00000439160 GFI1BQ5VTD9 330 aa10.03□□□□□ -0.8
TCOF1-205ENST00000439160 BTF3P20290 206 aaKnown RBP10.03□□□□□ -0.8
TCOF1-205ENST00000439160 GRNP28799 593 aaKnown RBP10.03□□□□□ -0.8
TCOF1-205ENST00000439160 GPR82Q96P67 336 aa10.03□□□□□ -0.8
TCOF1-205ENST00000439160 TUBA4BQ9H853 241 aa10.03□□□□□ -0.8
TCOF1-205ENST00000439160 IL36BQ9NZH7 164 aa10.03□□□□□ -0.8
TCOF1-205ENST00000439160 SIGLEC9Q9Y336 463 aa10.03□□□□□ -0.8
TCOF1-205ENST00000439160 DENND4AQ7Z401 1863 aa10.03□□□□□ -0.8
TCOF1-205ENST00000439160 AREGP15514 252 aa10.03□□□□□ -0.8
TCOF1-205ENST00000439160 SNRPD3P62318 126 aaKnown RBP10.03□□□□□ -0.8
TCOF1-205ENST00000439160 DDB2Q92466 427 aa10.03□□□□□ -0.8
TCOF1-205ENST00000439160 YAE1D1Q9NRH1 226 aa10.03□□□□□ -0.8
TCOF1-205ENST00000439160 C5orf52A6NGY3 159 aa10.03□□□□□ -0.8
TCOF1-205ENST00000439160 STAG3L2P0CL84 134 aa10.03□□□□□ -0.8
TCOF1-205ENST00000439160 STAG3L3P0CL85 134 aa10.03□□□□□ -0.8
TCOF1-205ENST00000439160 PVRIGQ6DKI7 326 aa10.03□□□□□ -0.8
TCOF1-205ENST00000439160 LINC00469Q8N7U9 141 aa10.03□□□□□ -0.8
TCOF1-205ENST00000439160 OCC1Q8TAD7 63 aa10.03□□□□□ -0.8
TCOF1-205ENST00000439160 FGF23Q9GZV9 251 aaPredicted RBP10.03□□□□□ -0.8
TCOF1-205ENST00000439160 HIST1H2BKO60814 126 aa10.02□□□□□ -0.8
TCOF1-205ENST00000439160 MMP23AO75900 390 aa10.02□□□□□ -0.8
TCOF1-205ENST00000439160 HIST1H2BJP06899 126 aa10.02□□□□□ -0.8
TCOF1-205ENST00000439160 PSG1P11464 419 aa10.02□□□□□ -0.8
TCOF1-205ENST00000439160 HIST1H2BOP23527 126 aa10.02□□□□□ -0.8
TCOF1-205ENST00000439160 HIST1H2BBP33778 126 aa10.02□□□□□ -0.8
TCOF1-205ENST00000439160 HIST1H2BDP58876 126 aa10.02□□□□□ -0.8
TCOF1-205ENST00000439160 HIST1H2BCP62807 126 aa10.02□□□□□ -0.8
TCOF1-205ENST00000439160 HIST2H2BEQ16778 126 aa10.02□□□□□ -0.8
TCOF1-205ENST00000439160 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.02□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms