RNA–Protein interactions for RNA: ENST00000439008.1

LINC00399-201, long intergenic non-protein coding RNA 399, humanhuman

TSL 2 BASIC

Gene LINC00399, Length 414 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00399-201ENST00000439008 FAM90A26D6RGX4 464 aa9.9□□□□□ -0.82
LINC00399-201ENST00000439008 PRSS46E5RG02 174 aa9.9□□□□□ -0.82
LINC00399-201ENST00000439008 WRBO00258 174 aa9.9□□□□□ -0.82
LINC00399-201ENST00000439008 TSPAN4O14817 238 aa9.9□□□□□ -0.82
LINC00399-201ENST00000439008 SYNGR2O43760 224 aa9.9□□□□□ -0.82
LINC00399-201ENST00000439008 UPK1BO75841 260 aa9.9□□□□□ -0.82
LINC00399-201ENST00000439008 NHLRC4P0CG21 123 aaPredicted RBP9.9□□□□□ -0.82
LINC00399-201ENST00000439008 ASAH1Q13510 395 aa9.9□□□□□ -0.82
LINC00399-201ENST00000439008 HAGHQ16775 308 aa9.9□□□□□ -0.82
LINC00399-201ENST00000439008 SLC16A13Q7RTY0 426 aa9.9□□□□□ -0.82
LINC00399-201ENST00000439008 MITD1Q8WV92 249 aa9.9□□□□□ -0.82
LINC00399-201ENST00000439008 ST8SIA2Q92186 375 aa9.9□□□□□ -0.82
LINC00399-201ENST00000439008 VSIRQ9H7M9 311 aa9.9□□□□□ -0.82
LINC00399-201ENST00000439008 TRAV14DV4A0A0A6YYC5 116 aa9.89□□□□□ -0.83
LINC00399-201ENST00000439008 CCSO14618 274 aa9.89□□□□□ -0.83
LINC00399-201ENST00000439008 SLC25A4P12235 298 aa9.89□□□□□ -0.83
LINC00399-201ENST00000439008 OR10J1P30954 320 aa9.89□□□□□ -0.83
LINC00399-201ENST00000439008 PAX9P55771 341 aa9.89□□□□□ -0.83
LINC00399-201ENST00000439008 POLR2GP62487 172 aaKnown RBP eCLIP9.89□□□□□ -0.83
LINC00399-201ENST00000439008 GAMTQ14353 236 aa9.89□□□□□ -0.83
LINC00399-201ENST00000439008 ODF3L2Q3SX64 289 aa9.89□□□□□ -0.83
LINC00399-201ENST00000439008 COQ8AQ8NI60 647 aa9.89□□□□□ -0.83
LINC00399-201ENST00000439008 ACY3Q96HD9 319 aa9.89□□□□□ -0.83
LINC00399-201ENST00000439008 TM2D3Q9BRN9 247 aa9.89□□□□□ -0.83
LINC00399-201ENST00000439008 BATF3Q9NR55 127 aa9.89□□□□□ -0.83
LINC00399-201ENST00000439008 CACFD1Q9UGQ2 172 aa9.89□□□□□ -0.83
LINC00399-201ENST00000439008 U3KQK5 164 aa9.89□□□□□ -0.83
LINC00399-201ENST00000439008 IGKV1OR2-108A0A075B7D4 117 aa9.88□□□□□ -0.83
LINC00399-201ENST00000439008 RPS10-NUDT3A0A1W2PQS6 291 aa9.88□□□□□ -0.83
LINC00399-201ENST00000439008 H3BP45 60 aa9.88□□□□□ -0.83
LINC00399-201ENST00000439008 CCNKO75909 580 aa9.88□□□□□ -0.83
LINC00399-201ENST00000439008 IFNA4P05014 189 aa9.88□□□□□ -0.83
LINC00399-201ENST00000439008 H2AFB2P0C5Z0 115 aa9.88□□□□□ -0.83
LINC00399-201ENST00000439008 ZNF846Q147U1 533 aa9.88□□□□□ -0.83
LINC00399-201ENST00000439008 RBPMS2Q6ZRY4 209 aaKnown RBP9.88□□□□□ -0.83
LINC00399-201ENST00000439008 SRD5A3Q9H8P0 318 aa9.88□□□□□ -0.83
LINC00399-201ENST00000439008 UBQLN2Q9UHD9 624 aa9.88□□□□□ -0.83
LINC00399-201ENST00000439008 U3KQE9 123 aa9.88□□□□□ -0.83
LINC00399-201ENST00000439008 IGKV3-7A0A075B6H7 116 aa9.87□□□□□ -0.83
LINC00399-201ENST00000439008 PIGBOS1A0A0B4J2F0 54 aa9.87□□□□□ -0.83
LINC00399-201ENST00000439008 FAM240BA0A1B0GVZ2 78 aa9.87□□□□□ -0.83
LINC00399-201ENST00000439008 DFFBO76075 338 aa9.87□□□□□ -0.83
LINC00399-201ENST00000439008 CRYBB3P26998 211 aa9.87□□□□□ -0.83
LINC00399-201ENST00000439008 YPEL3P61236 119 aaPredicted RBP9.87□□□□□ -0.83
LINC00399-201ENST00000439008 ZNF90Q03938 601 aa9.87□□□□□ -0.83
LINC00399-201ENST00000439008 USF2Q15853 346 aaPredicted RBP9.87□□□□□ -0.83
LINC00399-201ENST00000439008 ZNF124Q15973 351 aa9.87□□□□□ -0.83
LINC00399-201ENST00000439008 IAH1Q2TAA2 248 aaPredicted RBP9.87□□□□□ -0.83
LINC00399-201ENST00000439008 ZBTB8BQ8NAP8 495 aaPredicted RBP9.87□□□□□ -0.83
LINC00399-201ENST00000439008 OR1S2Q8NGQ3 325 aa9.87□□□□□ -0.83
LINC00399-201ENST00000439008 SPAG8Q99932 426 aaPredicted RBP9.87□□□□□ -0.83
LINC00399-201ENST00000439008 WDR12Q9GZL7 423 aaKnown RBP9.87□□□□□ -0.83
LINC00399-201ENST00000439008 TUBA4BQ9H853 241 aa9.87□□□□□ -0.83
LINC00399-201ENST00000439008 RETNQ9HD89 108 aa9.87□□□□□ -0.83
LINC00399-201ENST00000439008 TRAV30A0A087WSZ9 112 aa9.86□□□□□ -0.83
LINC00399-201ENST00000439008 PMS2P5A8MQ11 134 aa9.86□□□□□ -0.83
LINC00399-201ENST00000439008 MED6O75586 246 aa9.86□□□□□ -0.83
LINC00399-201ENST00000439008 GPX4P36969 197 aaPredicted RBP9.86□□□□□ -0.83
LINC00399-201ENST00000439008 NKX2-1P43699 371 aaPredicted RBP9.86□□□□□ -0.83
LINC00399-201ENST00000439008 SPANXN5Q5MJ07 72 aa9.86□□□□□ -0.83
LINC00399-201ENST00000439008 TCF24Q7RTU0 167 aa9.86□□□□□ -0.83
LINC00399-201ENST00000439008 NOXA1Q86UR1 476 aa9.86□□□□□ -0.83
LINC00399-201ENST00000439008 GBGT1Q8N5D6 347 aa9.86□□□□□ -0.83
LINC00399-201ENST00000439008 FAM24BQ8N5W8 94 aa9.86□□□□□ -0.83
LINC00399-201ENST00000439008 STPG3Q8N7X2 389 aa9.86□□□□□ -0.83
LINC00399-201ENST00000439008 ZNF431Q8TF32 576 aaPredicted RBP9.86□□□□□ -0.83
LINC00399-201ENST00000439008 RCHY1Q96PM5 261 aa9.86□□□□□ -0.83
LINC00399-201ENST00000439008 RCL1Q9Y2P8 373 aaKnown RBP9.86□□□□□ -0.83
LINC00399-201ENST00000439008 AGRNO00468 2067 aa9.86□□□□□ -0.83
LINC00399-201ENST00000439008 SSSCA1O60232 199 aa9.85□□□□□ -0.83
LINC00399-201ENST00000439008 TOMM40O96008 361 aa9.85□□□□□ -0.83
LINC00399-201ENST00000439008 IFNA21P01568 189 aa9.85□□□□□ -0.83
LINC00399-201ENST00000439008 MBPP02686 304 aaPredicted RBP9.85□□□□□ -0.83
LINC00399-201ENST00000439008 PSG1P11464 419 aa9.85□□□□□ -0.83
LINC00399-201ENST00000439008 TFPI2P48307 235 aa9.85□□□□□ -0.83
LINC00399-201ENST00000439008 ATP5IP56385 69 aaPredicted RBP9.85□□□□□ -0.83
LINC00399-201ENST00000439008 LAMTOR1Q6IAA8 161 aa9.85□□□□□ -0.83
LINC00399-201ENST00000439008 ETFRF1Q6IPR1 90 aa9.85□□□□□ -0.83
LINC00399-201ENST00000439008 NRARPQ7Z6K4 114 aa9.85□□□□□ -0.83
LINC00399-201ENST00000439008 GINS3Q9BRX5 216 aa9.85□□□□□ -0.83
LINC00399-201ENST00000439008 PAIP2BQ9ULR5 123 aaKnown RBP9.85□□□□□ -0.83
LINC00399-201ENST00000439008 IL4P05112 153 aa9.84□□□□□ -0.83
LINC00399-201ENST00000439008 NPPCP23582 126 aa9.84□□□□□ -0.83
LINC00399-201ENST00000439008 ARL16Q0P5N6 197 aa9.84□□□□□ -0.83
LINC00399-201ENST00000439008 IL15RAQ13261 267 aa9.84□□□□□ -0.83
LINC00399-201ENST00000439008 MZT2BQ6NZ67 158 aa9.84□□□□□ -0.83
LINC00399-201ENST00000439008 TMEM182Q6ZP80 229 aaPredicted RBP9.84□□□□□ -0.83
LINC00399-201ENST00000439008 APRG1Q8IVJ8 170 aa9.84□□□□□ -0.83
LINC00399-201ENST00000439008 C12orf45Q8N5I9 185 aaPredicted RBP9.84□□□□□ -0.83
LINC00399-201ENST00000439008 OR51G1Q8NGK1 321 aa9.84□□□□□ -0.83
LINC00399-201ENST00000439008 SMIM8Q96KF7 97 aa9.84□□□□□ -0.83
LINC00399-201ENST00000439008 CIB3Q96Q77 187 aaPredicted RBP9.84□□□□□ -0.83
LINC00399-201ENST00000439008 C11orf1Q9H5F2 150 aa9.84□□□□□ -0.83
LINC00399-201ENST00000439008 PSENENQ9NZ42 101 aa9.84□□□□□ -0.83
LINC00399-201ENST00000439008 GSKIPQ9P0R6 139 aa9.84□□□□□ -0.83
LINC00399-201ENST00000439008 DNAH7Q8WXX0 4024 aa9.84□□□□□ -0.83
LINC00399-201ENST00000439008 SCGB1D2O95969 90 aa9.83□□□□□ -0.84
LINC00399-201ENST00000439008 RD3LP0DJH9 198 aa9.83□□□□□ -0.84
LINC00399-201ENST00000439008 P2RY1P47900 373 aa9.83□□□□□ -0.84
LINC00399-201ENST00000439008 OR2F1Q13607 317 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms