RNA–Protein interactions for RNA: ENST00000437340.5

CPNE1-216, Transcript of copine 1, humanhuman

TSL 1 (best)

Gene CPNE1, Length 1,755 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-216ENST00000437340 ZNF562Q6V9R5 426 aa20.41■□□□□ 0.86
CPNE1-216ENST00000437340 LINC01551Q86U37 167 aa20.41■□□□□ 0.86
CPNE1-216ENST00000437340 SLC25A2Q9BXI2 301 aa20.41■□□□□ 0.86
CPNE1-216ENST00000437340 I3L2K1 104 aa20.4■□□□□ 0.86
CPNE1-216ENST00000437340 CXCL1P09341 107 aa20.4■□□□□ 0.86
CPNE1-216ENST00000437340 C16orf82Q7Z2V1 217 aa20.4■□□□□ 0.86
CPNE1-216ENST00000437340 DERL1Q9BUN8 251 aa20.4■□□□□ 0.86
CPNE1-216ENST00000437340 DOPEY2Q9Y3R5 2298 aa20.4■□□□□ 0.86
CPNE1-216ENST00000437340 A0A1W2PRE2 83 aa20.39■□□□□ 0.86
CPNE1-216ENST00000437340 RUSC1-AS1Q66K80 236 aa20.39■□□□□ 0.86
CPNE1-216ENST00000437340 FAM168AQ92567 244 aa20.39■□□□□ 0.86
CPNE1-216ENST00000437340 TRBV24-1A0A075B6N3 115 aa20.39■□□□□ 0.85
CPNE1-216ENST00000437340 H7BYZ3 331 aa20.39■□□□□ 0.85
CPNE1-216ENST00000437340 CD99P14209 185 aa20.39■□□□□ 0.85
CPNE1-216ENST00000437340 C2CD4CQ8TF44 421 aa20.39■□□□□ 0.85
CPNE1-216ENST00000437340 NRGNQ92686 78 aa20.39■□□□□ 0.85
CPNE1-216ENST00000437340 ZNF355PQ9NSJ1 428 aa20.39■□□□□ 0.85
CPNE1-216ENST00000437340 TACC2O95359 2948 aa20.38■□□□□ 0.85
CPNE1-216ENST00000437340 HELZ2Q9BYK8 2649 aaKnown RBP20.38■□□□□ 0.85
CPNE1-216ENST00000437340 TGIF2-C20orf24A0A0A6YYL0 155 aa20.38■□□□□ 0.85
CPNE1-216ENST00000437340 RPS10P46783 165 aaKnown RBP20.38■□□□□ 0.85
CPNE1-216ENST00000437340 PLP1P60201 277 aa20.38■□□□□ 0.85
CPNE1-216ENST00000437340 FBLN7Q53RD9 439 aa20.38■□□□□ 0.85
CPNE1-216ENST00000437340 OR5AU1Q8NGC0 362 aa20.38■□□□□ 0.85
CPNE1-216ENST00000437340 SSX3Q99909 188 aa20.38■□□□□ 0.85
CPNE1-216ENST00000437340 FAM106CPP0CH98 169 aa20.37■□□□□ 0.85
CPNE1-216ENST00000437340 TMEM11P17152 192 aa20.37■□□□□ 0.85
CPNE1-216ENST00000437340 SMUG1Q53HV7 270 aa20.37■□□□□ 0.85
CPNE1-216ENST00000437340 STXBP6Q8NFX7 210 aa20.37■□□□□ 0.85
CPNE1-216ENST00000437340 C10orf105Q8TEF2 133 aa20.37■□□□□ 0.85
CPNE1-216ENST00000437340 NPIPB5A8MRT5 1133 aa20.36■□□□□ 0.85
CPNE1-216ENST00000437340 TGOLN2O43493 480 aa20.36■□□□□ 0.85
CPNE1-216ENST00000437340 BRS3P32247 399 aa20.36■□□□□ 0.85
CPNE1-216ENST00000437340 MORN5Q5VZ52 161 aa20.36■□□□□ 0.85
CPNE1-216ENST00000437340 PERPQ96FX8 193 aa20.36■□□□□ 0.85
CPNE1-216ENST00000437340 AJUBAQ96IF1 538 aa20.36■□□□□ 0.85
CPNE1-216ENST00000437340 SAV1Q9H4B6 383 aaPredicted RBP20.36■□□□□ 0.85
CPNE1-216ENST00000437340 C1RLQ9NZP8 487 aa20.36■□□□□ 0.85
CPNE1-216ENST00000437340 LY96Q9Y6Y9 160 aa20.36■□□□□ 0.85
CPNE1-216ENST00000437340 NCBP2LA6PVI3 153 aaKnown RBP20.36■□□□□ 0.85
CPNE1-216ENST00000437340 VWC2LB2RUY7 222 aa20.36■□□□□ 0.85
CPNE1-216ENST00000437340 C9JCJ5 164 aa20.36■□□□□ 0.85
CPNE1-216ENST00000437340 UBE2L3P68036 154 aaKnown RBP20.36■□□□□ 0.85
CPNE1-216ENST00000437340 CX3CL1P78423 397 aa20.36■□□□□ 0.85
CPNE1-216ENST00000437340 ARPC1AQ92747 370 aa20.36■□□□□ 0.85
CPNE1-216ENST00000437340 FAM210BQ96KR6 192 aa20.36■□□□□ 0.85
CPNE1-216ENST00000437340 FBN2P35556 2912 aa20.36■□□□□ 0.85
CPNE1-216ENST00000437340 TRBV20OR9-2A0A075B6H5 130 aa20.35■□□□□ 0.85
CPNE1-216ENST00000437340 IGHV3-21A0A0B4J1V1 117 aa20.35■□□□□ 0.85
CPNE1-216ENST00000437340 TRAV5A0A0B4J249 113 aa20.35■□□□□ 0.85
CPNE1-216ENST00000437340 PFN1P07737 140 aaKnown RBP20.35■□□□□ 0.85
CPNE1-216ENST00000437340 OR10J4P0C629 311 aa20.35■□□□□ 0.85
CPNE1-216ENST00000437340 IGLC1P0CG04 106 aa20.35■□□□□ 0.85
CPNE1-216ENST00000437340 LINC00305Q7Z4B0 112 aa20.35■□□□□ 0.85
CPNE1-216ENST00000437340 OR5B12Q96R08 314 aa20.35■□□□□ 0.85
CPNE1-216ENST00000437340 PAXXQ9BUH6 204 aa20.35■□□□□ 0.85
CPNE1-216ENST00000437340 WNK2Q9Y3S1 2297 aa20.35■□□□□ 0.85
CPNE1-216ENST00000437340 K7EIM0 57 aa20.34■□□□□ 0.85
CPNE1-216ENST00000437340 PPP1R2P9O14990 202 aa20.34■□□□□ 0.85
CPNE1-216ENST00000437340 S100PP25815 95 aa20.34■□□□□ 0.85
CPNE1-216ENST00000437340 SAA4P35542 130 aa20.34■□□□□ 0.85
CPNE1-216ENST00000437340 PAX8Q06710 450 aa20.34■□□□□ 0.85
CPNE1-216ENST00000437340 CLEC2AQ6UVW9 174 aa20.34■□□□□ 0.85
CPNE1-216ENST00000437340 HYPMO75409 117 aa20.34■□□□□ 0.85
CPNE1-216ENST00000437340 PSMG3-AS1Q96PY0 264 aa20.34■□□□□ 0.85
CPNE1-216ENST00000437340 OR51M1Q9H341 326 aa20.34■□□□□ 0.85
CPNE1-216ENST00000437340 S100A6P06703 90 aa20.33■□□□□ 0.84
CPNE1-216ENST00000437340 ORM2P19652 201 aa20.33■□□□□ 0.84
CPNE1-216ENST00000437340 GALR1P47211 349 aa20.33■□□□□ 0.84
CPNE1-216ENST00000437340 TTC9CQ8N5M4 171 aa20.33■□□□□ 0.84
CPNE1-216ENST00000437340 OR1B1Q8NGR6 318 aa20.33■□□□□ 0.84
CPNE1-216ENST00000437340 PYGO2Q9BRQ0 406 aa20.33■□□□□ 0.84
CPNE1-216ENST00000437340 FAM103A1Q9BTL3 118 aaKnown RBP20.33■□□□□ 0.84
CPNE1-216ENST00000437340 SPG11Q96JI7 2443 aa20.33■□□□□ 0.84
CPNE1-216ENST00000437340 IGHV4-61A0A0C4DH41 118 aa20.32■□□□□ 0.84
CPNE1-216ENST00000437340 GGTLC3B5MD39 225 aa20.32■□□□□ 0.84
CPNE1-216ENST00000437340 NPFFO15130 113 aa20.32■□□□□ 0.84
CPNE1-216ENST00000437340 FABP1P07148 127 aa20.32■□□□□ 0.84
CPNE1-216ENST00000437340 ATP5J2P56134 94 aa20.32■□□□□ 0.84
CPNE1-216ENST00000437340 CELSR2Q9HCU4 2923 aa20.32■□□□□ 0.84
CPNE1-216ENST00000437340 SRP14P37108 136 aaKnown RBP20.31■□□□□ 0.84
CPNE1-216ENST00000437340 RPL35P42766 123 aaKnown RBP20.31■□□□□ 0.84
CPNE1-216ENST00000437340 MED13LQ71F56 2210 aa20.31■□□□□ 0.84
CPNE1-216ENST00000437340 KRTAP10-9P60411 292 aa20.31■□□□□ 0.84
CPNE1-216ENST00000437340 ASPHD1Q5U4P2 390 aa20.31■□□□□ 0.84
CPNE1-216ENST00000437340 OR5T1Q8NG75 326 aa20.31■□□□□ 0.84
CPNE1-216ENST00000437340 RASL11BQ9BPW5 248 aa20.31■□□□□ 0.84
CPNE1-216ENST00000437340 CENPVL3A0A0U1RRI6 287 aa20.3■□□□□ 0.84
CPNE1-216ENST00000437340 C5orf52A6NGY3 159 aa20.3■□□□□ 0.84
CPNE1-216ENST00000437340 HLA-DRB1P01911 266 aa20.3■□□□□ 0.84
CPNE1-216ENST00000437340 CRYBB3P26998 211 aa20.3■□□□□ 0.84
CPNE1-216ENST00000437340 SUMO1P63165 101 aaKnown RBP20.3■□□□□ 0.84
CPNE1-216ENST00000437340 NDPQ00604 133 aa20.3■□□□□ 0.84
CPNE1-216ENST00000437340 Q8N9W7 124 aa20.3■□□□□ 0.84
CPNE1-216ENST00000437340 OCC1Q8TAD7 63 aa20.3■□□□□ 0.84
CPNE1-216ENST00000437340 FXYD5Q96DB9 178 aa20.3■□□□□ 0.84
CPNE1-216ENST00000437340 IMMP2LQ96T52 175 aa20.3■□□□□ 0.84
CPNE1-216ENST00000437340 IGLV11-55A0A075B6I3 123 aa20.29■□□□□ 0.84
CPNE1-216ENST00000437340 HELTA6NFD8 242 aa20.29■□□□□ 0.84
CPNE1-216ENST00000437340 SFRP2Q96HF1 295 aa20.29■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms