RNA–Protein interactions for RNA: ENST00000436412.1

NIF3L1-208, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 3

Gene NIF3L1, Length 479 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-208ENST00000436412 RAB40CQ96S21 281 aa5.95□□□□□ -1.46
NIF3L1-208ENST00000436412 SEPSECSQ9HD40 501 aaKnown RBP5.95□□□□□ -1.46
NIF3L1-208ENST00000436412 SLC45A2Q9UMX9 530 aa5.95□□□□□ -1.46
NIF3L1-208ENST00000436412 TMED3Q9Y3Q3 217 aa5.95□□□□□ -1.46
NIF3L1-208ENST00000436412 PUS1Q9Y606 427 aaKnown RBP eCLIP5.95□□□□□ -1.46
NIF3L1-208ENST00000436412 NBDYA0A0U1RRE5 68 aa5.94□□□□□ -1.46
NIF3L1-208ENST00000436412 HELTA6NFD8 242 aa5.94□□□□□ -1.46
NIF3L1-208ENST00000436412 KRASP01116 189 aa5.94□□□□□ -1.46
NIF3L1-208ENST00000436412 P2RY1P47900 373 aa5.94□□□□□ -1.46
NIF3L1-208ENST00000436412 HOXA1P49639 335 aaPredicted RBP5.94□□□□□ -1.46
NIF3L1-208ENST00000436412 AP2S1P53680 142 aaPredicted RBP5.94□□□□□ -1.46
NIF3L1-208ENST00000436412 FXYD4P59646 89 aa5.94□□□□□ -1.46
NIF3L1-208ENST00000436412 ZNF705AQ6ZN79 300 aaPredicted RBP5.94□□□□□ -1.46
NIF3L1-208ENST00000436412 HOGA1Q86XE5 327 aa5.94□□□□□ -1.46
NIF3L1-208ENST00000436412 C15orf53Q8NAA6 179 aa5.94□□□□□ -1.46
NIF3L1-208ENST00000436412 TSPAN14Q8NG11 270 aa5.94□□□□□ -1.46
NIF3L1-208ENST00000436412 MGLLQ99685 303 aa5.94□□□□□ -1.46
NIF3L1-208ENST00000436412 NIPSNAP3BQ9BS92 247 aa5.94□□□□□ -1.46
NIF3L1-208ENST00000436412 XCL2Q9UBD3 114 aa5.94□□□□□ -1.46
NIF3L1-208ENST00000436412 DAPK2Q9UIK4 370 aa5.94□□□□□ -1.46
NIF3L1-208ENST00000436412 NSG2Q9Y328 171 aa5.94□□□□□ -1.46
NIF3L1-208ENST00000436412 RFNGQ9Y644 331 aa5.94□□□□□ -1.46
NIF3L1-208ENST00000436412 ZNF705FA8MVS1 300 aaPredicted RBP5.93□□□□□ -1.46
NIF3L1-208ENST00000436412 SCGB2A1O75556 95 aa5.93□□□□□ -1.46
NIF3L1-208ENST00000436412 TMEM50AO95807 157 aa5.93□□□□□ -1.46
NIF3L1-208ENST00000436412 ZNF705DP0CH99 300 aaPredicted RBP5.93□□□□□ -1.46
NIF3L1-208ENST00000436412 ZNF705BP0CI00 300 aaPredicted RBP5.93□□□□□ -1.46
NIF3L1-208ENST00000436412 GNRHRP30968 328 aa5.93□□□□□ -1.46
NIF3L1-208ENST00000436412 G6PCP35575 357 aa5.93□□□□□ -1.46
NIF3L1-208ENST00000436412 LPAR6P43657 344 aa5.93□□□□□ -1.46
NIF3L1-208ENST00000436412 EMP1P54849 157 aa5.93□□□□□ -1.46
NIF3L1-208ENST00000436412 SNRPD3P62318 126 aaKnown RBP5.93□□□□□ -1.46
NIF3L1-208ENST00000436412 ERHP84090 104 aaKnown RBP5.93□□□□□ -1.46
NIF3L1-208ENST00000436412 DHRS2Q13268 280 aa5.93□□□□□ -1.46
NIF3L1-208ENST00000436412 PSMG4Q5JS54 123 aa5.93□□□□□ -1.46
NIF3L1-208ENST00000436412 OGFRL1Q5TC84 451 aaPredicted RBP5.93□□□□□ -1.46
NIF3L1-208ENST00000436412 TMEM17Q86X19 198 aa5.93□□□□□ -1.46
NIF3L1-208ENST00000436412 FCAMRQ8WWV6 532 aa5.93□□□□□ -1.46
NIF3L1-208ENST00000436412 PINX1Q96BK5 328 aaKnown RBP5.93□□□□□ -1.46
NIF3L1-208ENST00000436412 YTHDF1Q9BYJ9 559 aaKnown RBP5.93□□□□□ -1.46
NIF3L1-208ENST00000436412 DUSP21Q9H596 190 aa5.93□□□□□ -1.46
NIF3L1-208ENST00000436412 FAM212BQ9NTI7 297 aaPredicted RBP5.93□□□□□ -1.46
NIF3L1-208ENST00000436412 TPRKBQ9Y3C4 175 aa5.93□□□□□ -1.46
NIF3L1-208ENST00000436412 VPS13BQ7Z7G8 4022 aa5.93□□□□□ -1.46
NIF3L1-208ENST00000436412 A0A1B0GU03 582 aa5.92□□□□□ -1.46
NIF3L1-208ENST00000436412 TRDV1A0A1B0GX56 115 aa5.92□□□□□ -1.46
NIF3L1-208ENST00000436412 EPM2AB3EWF7 344 aa5.92□□□□□ -1.46
NIF3L1-208ENST00000436412 H3BMM0 161 aa5.92□□□□□ -1.46
NIF3L1-208ENST00000436412 RGS10O43665 173 aa5.92□□□□□ -1.46
NIF3L1-208ENST00000436412 PGLYRP1O75594 196 aaPredicted RBP5.92□□□□□ -1.46
NIF3L1-208ENST00000436412 IGHV3-48P01763 117 aa5.92□□□□□ -1.46
NIF3L1-208ENST00000436412 RLN1P04808 185 aa5.92□□□□□ -1.46
NIF3L1-208ENST00000436412 HERV-K104P61576 105 aa5.92□□□□□ -1.46
NIF3L1-208ENST00000436412 HSPE1P61604 102 aaKnown RBP5.92□□□□□ -1.46
NIF3L1-208ENST00000436412 PRCDQ00LT1 54 aa5.92□□□□□ -1.46
NIF3L1-208ENST00000436412 FAM222AQ5U5X8 452 aa5.92□□□□□ -1.46
NIF3L1-208ENST00000436412 DHRS11Q6UWP2 260 aa5.92□□□□□ -1.46
NIF3L1-208ENST00000436412 SPATA12Q7Z6I5 190 aa5.92□□□□□ -1.46
NIF3L1-208ENST00000436412 CMTM1Q8IZ96 169 aa5.92□□□□□ -1.46
NIF3L1-208ENST00000436412 OR5AP2Q8NGF4 316 aa5.92□□□□□ -1.46
NIF3L1-208ENST00000436412 OR4A16Q8NH70 328 aa5.92□□□□□ -1.46
NIF3L1-208ENST00000436412 ATG101Q9BSB4 218 aa5.92□□□□□ -1.46
NIF3L1-208ENST00000436412 CORTO00230 105 aa5.91□□□□□ -1.46
NIF3L1-208ENST00000436412 INAFM2P0DMQ5 153 aa5.91□□□□□ -1.46
NIF3L1-208ENST00000436412 PTHLHP12272 177 aa5.91□□□□□ -1.46
NIF3L1-208ENST00000436412 HLA-DRB4P13762 266 aa5.91□□□□□ -1.46
NIF3L1-208ENST00000436412 HTN3P15516 51 aa5.91□□□□□ -1.46
NIF3L1-208ENST00000436412 SNCAP37840 140 aa5.91□□□□□ -1.46
NIF3L1-208ENST00000436412 CBX5P45973 191 aa5.91□□□□□ -1.46
NIF3L1-208ENST00000436412 ALDH3B2P48448 385 aa5.91□□□□□ -1.46
NIF3L1-208ENST00000436412 TMEM88Q6PEY1 159 aa5.91□□□□□ -1.46
NIF3L1-208ENST00000436412 GSG1LQ6UXU4 331 aa5.91□□□□□ -1.46
NIF3L1-208ENST00000436412 PRSS48Q7RTY5 328 aa5.91□□□□□ -1.46
NIF3L1-208ENST00000436412 ZNRF2Q8NHG8 242 aa5.91□□□□□ -1.46
NIF3L1-208ENST00000436412 VCXQ9H320 206 aa5.91□□□□□ -1.46
NIF3L1-208ENST00000436412 NDUFB11Q9NX14 153 aa5.91□□□□□ -1.46
NIF3L1-208ENST00000436412 RHBDL2Q9NX52 303 aa5.91□□□□□ -1.46
NIF3L1-208ENST00000436412 HLA-DRB4X5D2U9 266 aa5.91□□□□□ -1.46
NIF3L1-208ENST00000436412 TRAV30A0A087WSZ9 112 aa5.9□□□□□ -1.46
NIF3L1-208ENST00000436412 A0A0A6YYH2 397 aa5.9□□□□□ -1.46
NIF3L1-208ENST00000436412 A6NJ64 397 aa5.9□□□□□ -1.46
NIF3L1-208ENST00000436412 FAM90A26D6RGX4 464 aa5.9□□□□□ -1.46
NIF3L1-208ENST00000436412 INS-IGF2F8WCM5 200 aa5.9□□□□□ -1.46
NIF3L1-208ENST00000436412 CLN5O75503 358 aa5.9□□□□□ -1.46
NIF3L1-208ENST00000436412 BTF3P20290 206 aaKnown RBP5.9□□□□□ -1.46
NIF3L1-208ENST00000436412 S100GP29377 79 aa5.9□□□□□ -1.46
NIF3L1-208ENST00000436412 NKX2-1P43699 371 aaPredicted RBP5.9□□□□□ -1.46
NIF3L1-208ENST00000436412 PPP5CP53041 499 aa5.9□□□□□ -1.46
NIF3L1-208ENST00000436412 SUB1P53999 127 aaKnown RBP eCLIP5.9□□□□□ -1.46
NIF3L1-208ENST00000436412 DAD1P61803 113 aa5.9□□□□□ -1.46
NIF3L1-208ENST00000436412 H2BFWTQ7Z2G1 175 aa5.9□□□□□ -1.46
NIF3L1-208ENST00000436412 OR4X1Q8NH49 305 aa5.9□□□□□ -1.46
NIF3L1-208ENST00000436412 LGALS14Q8TCE9 139 aa5.9□□□□□ -1.46
NIF3L1-208ENST00000436412 TMEM230Q96A57 120 aa5.9□□□□□ -1.46
NIF3L1-208ENST00000436412 SEC22AQ96IW7 307 aa5.9□□□□□ -1.46
NIF3L1-208ENST00000436412 NRN1Q9NPD7 142 aa5.9□□□□□ -1.46
NIF3L1-208ENST00000436412 TRAV18A0A075B6X5 111 aa5.89□□□□□ -1.47
NIF3L1-208ENST00000436412 GPR31O00270 319 aa5.89□□□□□ -1.47
NIF3L1-208ENST00000436412 HBE1P02100 147 aa5.89□□□□□ -1.47
NIF3L1-208ENST00000436412 RPL5P46777 297 aaKnown RBP5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms