RNA–Protein interactions for RNA: ENST00000435083.5

CHRNA1-207, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 3

Gene CHRNA1, Length 1,596 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-207ENST00000435083 AKR1C2P52895 323 aa8.29□□□□□ -1.08
CHRNA1-207ENST00000435083 AP2S1P53680 142 aaPredicted RBP8.29□□□□□ -1.08
CHRNA1-207ENST00000435083 CTF1Q16619 201 aa8.29□□□□□ -1.08
CHRNA1-207ENST00000435083 C16orf54Q6UWD8 224 aa8.29□□□□□ -1.08
CHRNA1-207ENST00000435083 Q6ZRM9 215 aa8.29□□□□□ -1.08
CHRNA1-207ENST00000435083 ENY2Q9NPA8 101 aa8.29□□□□□ -1.08
CHRNA1-207ENST00000435083 U3KQE9 123 aa8.29□□□□□ -1.08
CHRNA1-207ENST00000435083 IGHV3OR16-12A0A075B7B8 117 aa8.28□□□□□ -1.08
CHRNA1-207ENST00000435083 TRAV30A0A087WSZ9 112 aa8.28□□□□□ -1.08
CHRNA1-207ENST00000435083 A0A0B4J293 547 aa8.28□□□□□ -1.08
CHRNA1-207ENST00000435083 H3BMM0 161 aa8.28□□□□□ -1.08
CHRNA1-207ENST00000435083 IGKV1-17P01599 117 aa8.28□□□□□ -1.08
CHRNA1-207ENST00000435083 HNRNPCP07910 306 aaKnown RBP eCLIP8.28□□□□□ -1.08
CHRNA1-207ENST00000435083 UCP3P55916 312 aa8.28□□□□□ -1.08
CHRNA1-207ENST00000435083 SNRPD3P62318 126 aaKnown RBP8.28□□□□□ -1.08
CHRNA1-207ENST00000435083 C1orf134Q5TEV5 83 aa8.28□□□□□ -1.08
CHRNA1-207ENST00000435083 Q8WTZ3 238 aa8.28□□□□□ -1.08
CHRNA1-207ENST00000435083 GLMPQ8WWB7 406 aa8.28□□□□□ -1.08
CHRNA1-207ENST00000435083 NAA50Q9GZZ1 169 aaKnown RBP8.28□□□□□ -1.08
CHRNA1-207ENST00000435083 PKHD1P08F94 4074 aa8.28□□□□□ -1.08
CHRNA1-207ENST00000435083 TMEM189A5PLL7 270 aa8.27□□□□□ -1.09
CHRNA1-207ENST00000435083 FAM90A26D6RGX4 464 aa8.27□□□□□ -1.09
CHRNA1-207ENST00000435083 IGKV3-20P01619 116 aa8.27□□□□□ -1.09
CHRNA1-207ENST00000435083 PGAM2P15259 253 aa8.27□□□□□ -1.09
CHRNA1-207ENST00000435083 HTN3P15516 51 aa8.27□□□□□ -1.09
CHRNA1-207ENST00000435083 FXYD7P58549 80 aa8.27□□□□□ -1.09
CHRNA1-207ENST00000435083 CROCCP3Q8IVE0 287 aa8.27□□□□□ -1.09
CHRNA1-207ENST00000435083 GPX8Q8TED1 209 aa8.27□□□□□ -1.09
CHRNA1-207ENST00000435083 FAM210BQ96KR6 192 aa8.27□□□□□ -1.09
CHRNA1-207ENST00000435083 NEU1Q99519 415 aa8.27□□□□□ -1.09
CHRNA1-207ENST00000435083 RPS10-NUDT3A0A1W2PQS6 291 aa8.27□□□□□ -1.09
CHRNA1-207ENST00000435083 ATG12O94817 140 aa8.27□□□□□ -1.09
CHRNA1-207ENST00000435083 PI3P19957 117 aa8.27□□□□□ -1.09
CHRNA1-207ENST00000435083 TGFBR1P36897 503 aa8.27□□□□□ -1.09
CHRNA1-207ENST00000435083 DHODHQ02127 395 aa8.27□□□□□ -1.09
CHRNA1-207ENST00000435083 RNF212Q495C1 297 aa8.27□□□□□ -1.09
CHRNA1-207ENST00000435083 ZNF705AQ6ZN79 300 aaPredicted RBP8.27□□□□□ -1.09
CHRNA1-207ENST00000435083 TP53RKQ96S44 253 aa8.27□□□□□ -1.09
CHRNA1-207ENST00000435083 NRN1Q9NPD7 142 aa8.27□□□□□ -1.09
CHRNA1-207ENST00000435083 SMIM9A6NGZ8 99 aa8.26□□□□□ -1.09
CHRNA1-207ENST00000435083 ZNF705FA8MVS1 300 aaPredicted RBP8.26□□□□□ -1.09
CHRNA1-207ENST00000435083 M0QYG6 137 aa8.26□□□□□ -1.09
CHRNA1-207ENST00000435083 P0C879 139 aa8.26□□□□□ -1.09
CHRNA1-207ENST00000435083 IGLC1P0CG04 106 aa8.26□□□□□ -1.09
CHRNA1-207ENST00000435083 ZNF705DP0CH99 300 aaPredicted RBP8.26□□□□□ -1.09
CHRNA1-207ENST00000435083 ZNF705BP0CI00 300 aaPredicted RBP8.26□□□□□ -1.09
CHRNA1-207ENST00000435083 HLA-DRB4P13762 266 aa8.26□□□□□ -1.09
CHRNA1-207ENST00000435083 RPS19P39019 145 aaKnown RBP8.26□□□□□ -1.09
CHRNA1-207ENST00000435083 RND2P52198 227 aa8.26□□□□□ -1.09
CHRNA1-207ENST00000435083 PKD1P98161 4303 aa8.26□□□□□ -1.09
CHRNA1-207ENST00000435083 FAM222AQ5U5X8 452 aa8.26□□□□□ -1.09
CHRNA1-207ENST00000435083 SNX29P2Q8IUI4 249 aa8.26□□□□□ -1.09
CHRNA1-207ENST00000435083 OR1S2Q8NGQ3 325 aa8.26□□□□□ -1.09
CHRNA1-207ENST00000435083 RNASE11Q8TAA1 199 aaKnown RBP8.26□□□□□ -1.09
CHRNA1-207ENST00000435083 NIPSNAP3BQ9BS92 247 aa8.26□□□□□ -1.09
CHRNA1-207ENST00000435083 RFNGQ9Y644 331 aa8.26□□□□□ -1.09
CHRNA1-207ENST00000435083 HLA-DRB4X5D2U9 266 aa8.26□□□□□ -1.09
CHRNA1-207ENST00000435083 C3orf85A0A1B0GTC6 90 aa8.25□□□□□ -1.09
CHRNA1-207ENST00000435083 IL4P05112 153 aa8.25□□□□□ -1.09
CHRNA1-207ENST00000435083 OR10J1P30954 320 aa8.25□□□□□ -1.09
CHRNA1-207ENST00000435083 RCVRNP35243 200 aa8.25□□□□□ -1.09
CHRNA1-207ENST00000435083 PIGPP57054 158 aa8.25□□□□□ -1.09
CHRNA1-207ENST00000435083 RND3P61587 244 aa8.25□□□□□ -1.09
CHRNA1-207ENST00000435083 VBP1P61758 197 aa8.25□□□□□ -1.09
CHRNA1-207ENST00000435083 USF2Q15853 346 aaPredicted RBP8.25□□□□□ -1.09
CHRNA1-207ENST00000435083 TRIM16LQ309B1 348 aa8.25□□□□□ -1.09
CHRNA1-207ENST00000435083 BSXQ3C1V8 233 aa8.25□□□□□ -1.09
CHRNA1-207ENST00000435083 SP6Q3SY56 376 aa8.25□□□□□ -1.09
CHRNA1-207ENST00000435083 SIGLEC15Q6ZMC9 328 aa8.25□□□□□ -1.09
CHRNA1-207ENST00000435083 LINC00299Q6ZSB3 139 aa8.25□□□□□ -1.09
CHRNA1-207ENST00000435083 RRNAD1Q96FB5 475 aaKnown RBP8.25□□□□□ -1.09
CHRNA1-207ENST00000435083 SEPSECSQ9HD40 501 aaKnown RBP8.25□□□□□ -1.09
CHRNA1-207ENST00000435083 DKK2Q9UBU2 259 aa8.25□□□□□ -1.09
CHRNA1-207ENST00000435083 A0A0G2JRQ6 117 aa8.24□□□□□ -1.09
CHRNA1-207ENST00000435083 TEX48A0A1B0GUV7 120 aa8.24□□□□□ -1.09
CHRNA1-207ENST00000435083 C16orf90A8MZG2 172 aa8.24□□□□□ -1.09
CHRNA1-207ENST00000435083 HTR2BP41595 481 aa8.24□□□□□ -1.09
CHRNA1-207ENST00000435083 NKX2-1P43699 371 aaPredicted RBP8.24□□□□□ -1.09
CHRNA1-207ENST00000435083 DEFB1P60022 68 aa8.24□□□□□ -1.09
CHRNA1-207ENST00000435083 YPEL3P61236 119 aaPredicted RBP8.24□□□□□ -1.09
CHRNA1-207ENST00000435083 NCS1P62166 190 aa8.24□□□□□ -1.09
CHRNA1-207ENST00000435083 LSM3P62310 102 aaKnown RBP8.24□□□□□ -1.09
CHRNA1-207ENST00000435083 SPCS2Q15005 226 aa8.24□□□□□ -1.09
CHRNA1-207ENST00000435083 GDF5OSQ5U4N7 250 aa8.24□□□□□ -1.09
CHRNA1-207ENST00000435083 PRSS54Q6PEW0 395 aa8.24□□□□□ -1.09
CHRNA1-207ENST00000435083 MAPKAPK5-AS1Q8N8E1 139 aa8.24□□□□□ -1.09
CHRNA1-207ENST00000435083 ZNF486Q96H40 463 aaPredicted RBP8.24□□□□□ -1.09
CHRNA1-207ENST00000435083 SCPEP1Q9HB40 452 aa8.24□□□□□ -1.09
CHRNA1-207ENST00000435083 HEYLQ9NQ87 328 aaPredicted RBP8.24□□□□□ -1.09
CHRNA1-207ENST00000435083 CCDC59Q9P031 241 aaKnown RBP8.24□□□□□ -1.09
CHRNA1-207ENST00000435083 NACAE9PAV3 2078 aa8.24□□□□□ -1.09
CHRNA1-207ENST00000435083 BUB3O43684 328 aa8.23□□□□□ -1.09
CHRNA1-207ENST00000435083 GSTZ1O43708 216 aaPredicted RBP8.23□□□□□ -1.09
CHRNA1-207ENST00000435083 SLC25A4P12235 298 aa8.23□□□□□ -1.09
CHRNA1-207ENST00000435083 ZNF182P17025 639 aaPredicted RBP8.23□□□□□ -1.09
CHRNA1-207ENST00000435083 TNP2Q05952 138 aa8.23□□□□□ -1.09
CHRNA1-207ENST00000435083 TMEM88Q6PEY1 159 aa8.23□□□□□ -1.09
CHRNA1-207ENST00000435083 OR4B1Q8NGF8 309 aa8.23□□□□□ -1.09
CHRNA1-207ENST00000435083 DYNC2LI1Q8TCX1 351 aa8.23□□□□□ -1.09
CHRNA1-207ENST00000435083 LINC00052Q96N35 136 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 85.4 ms