RNA–Protein interactions for RNA: ENST00000433260.1

HMGB3P24-201, Transcript of high mobility group box 3 pseudogene 24, humanhuman

BASIC

Gene HMGB3P24, Length 622 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P24-201ENST00000433260 BTNL8Q6UX41 500 aa4.35□□□□□ -1.71
HMGB3P24-201ENST00000433260 TOMM20LQ6UXN7 152 aa4.35□□□□□ -1.71
HMGB3P24-201ENST00000433260 LINC00299Q6ZSB3 139 aa4.35□□□□□ -1.71
HMGB3P24-201ENST00000433260 TMEM116Q8NCL8 245 aa4.35□□□□□ -1.71
HMGB3P24-201ENST00000433260 TMEM170AQ8WVE7 144 aa4.35□□□□□ -1.71
HMGB3P24-201ENST00000433260 NPIPB3Q92617 1050 aa4.35□□□□□ -1.71
HMGB3P24-201ENST00000433260 ACY3Q96HD9 319 aa4.35□□□□□ -1.71
HMGB3P24-201ENST00000433260 OR10C1Q96KK4 312 aa4.35□□□□□ -1.71
HMGB3P24-201ENST00000433260 TXN2Q99757 166 aa4.35□□□□□ -1.71
HMGB3P24-201ENST00000433260 WDR12Q9GZL7 423 aaKnown RBP4.35□□□□□ -1.71
HMGB3P24-201ENST00000433260 C20orf85Q9H1P6 137 aa4.35□□□□□ -1.71
HMGB3P24-201ENST00000433260 GAR1Q9NY12 217 aaKnown RBP4.35□□□□□ -1.71
HMGB3P24-201ENST00000433260 TECRQ9NZ01 308 aaKnown RBP4.35□□□□□ -1.71
HMGB3P24-201ENST00000433260 PTTG2Q9NZH5 202 aa4.35□□□□□ -1.71
HMGB3P24-201ENST00000433260 HSPB7Q9UBY9 170 aa4.35□□□□□ -1.71
HMGB3P24-201ENST00000433260 TBC1D24Q9ULP9 559 aa4.35□□□□□ -1.71
HMGB3P24-201ENST00000433260 TMED3Q9Y3Q3 217 aa4.35□□□□□ -1.71
HMGB3P24-201ENST00000433260 PUS1Q9Y606 427 aaKnown RBP eCLIP4.35□□□□□ -1.71
HMGB3P24-201ENST00000433260 NBEAL1Q6ZS30 2694 aa4.35□□□□□ -1.71
HMGB3P24-201ENST00000433260 PKD1L1Q8TDX9 2849 aa4.35□□□□□ -1.71
HMGB3P24-201ENST00000433260 PIGBOS1A0A0B4J2F0 54 aa4.34□□□□□ -1.71
HMGB3P24-201ENST00000433260 IGHV7-4-1A0A0J9YVY3 117 aa4.34□□□□□ -1.71
HMGB3P24-201ENST00000433260 RPS10-NUDT3A0A1W2PQS6 291 aa4.34□□□□□ -1.71
HMGB3P24-201ENST00000433260 A8MWP6 167 aa4.34□□□□□ -1.71
HMGB3P24-201ENST00000433260 FAM25EA8MYX2 175 aa4.34□□□□□ -1.71
HMGB3P24-201ENST00000433260 H3BP45 60 aa4.34□□□□□ -1.71
HMGB3P24-201ENST00000433260 K7EMT4 169 aa4.34□□□□□ -1.71
HMGB3P24-201ENST00000433260 CCSO14618 274 aa4.34□□□□□ -1.71
HMGB3P24-201ENST00000433260 MED6O75586 246 aa4.34□□□□□ -1.71
HMGB3P24-201ENST00000433260 UPK1BO75841 260 aa4.34□□□□□ -1.71
HMGB3P24-201ENST00000433260 FRMD6-AS1P0C7T7 363 aa4.34□□□□□ -1.71
HMGB3P24-201ENST00000433260 C8orf88P0DMB2 117 aa4.34□□□□□ -1.71
HMGB3P24-201ENST00000433260 TFPI2P48307 235 aa4.34□□□□□ -1.71
HMGB3P24-201ENST00000433260 RND2P52198 227 aa4.34□□□□□ -1.71
HMGB3P24-201ENST00000433260 CD81P60033 236 aa4.34□□□□□ -1.71
HMGB3P24-201ENST00000433260 POLR2GP62487 172 aaKnown RBP eCLIP4.34□□□□□ -1.71
HMGB3P24-201ENST00000433260 BSXQ3C1V8 233 aa4.34□□□□□ -1.71
HMGB3P24-201ENST00000433260 SPANXN5Q5MJ07 72 aa4.34□□□□□ -1.71
HMGB3P24-201ENST00000433260 PVRIGQ6DKI7 326 aa4.34□□□□□ -1.71
HMGB3P24-201ENST00000433260 ETFRF1Q6IPR1 90 aa4.34□□□□□ -1.71
HMGB3P24-201ENST00000433260 PRSS54Q6PEW0 395 aa4.34□□□□□ -1.71
HMGB3P24-201ENST00000433260 GTSCR1Q86UQ5 136 aa4.34□□□□□ -1.71
HMGB3P24-201ENST00000433260 SBSPONQ8IVN8 264 aa4.34□□□□□ -1.71
HMGB3P24-201ENST00000433260 TMEM61Q8N0U2 210 aa4.34□□□□□ -1.71
HMGB3P24-201ENST00000433260 C12orf45Q8N5I9 185 aaPredicted RBP4.34□□□□□ -1.71
HMGB3P24-201ENST00000433260 DEFB125Q8N687 156 aa4.34□□□□□ -1.71
HMGB3P24-201ENST00000433260 ENKURQ8TC29 256 aa4.34□□□□□ -1.71
HMGB3P24-201ENST00000433260 Q8WTZ3 238 aa4.34□□□□□ -1.71
HMGB3P24-201ENST00000433260 TMEM190Q8WZ59 177 aa4.34□□□□□ -1.71
HMGB3P24-201ENST00000433260 ZNF414Q96IQ9 312 aa4.34□□□□□ -1.71
HMGB3P24-201ENST00000433260 B9D2Q9BPU9 175 aa4.34□□□□□ -1.71
HMGB3P24-201ENST00000433260 NEURL2Q9BR09 285 aa4.34□□□□□ -1.71
HMGB3P24-201ENST00000433260 RHPN1-AS1Q9BWJ2 59 aa4.34□□□□□ -1.71
HMGB3P24-201ENST00000433260 WFDC10AQ9H1F0 79 aa4.34□□□□□ -1.71
HMGB3P24-201ENST00000433260 TUBA4BQ9H853 241 aa4.34□□□□□ -1.71
HMGB3P24-201ENST00000433260 NUDT15Q9NV35 164 aa4.34□□□□□ -1.71
HMGB3P24-201ENST00000433260 SIGLEC8Q9NYZ4 499 aa4.34□□□□□ -1.71
HMGB3P24-201ENST00000433260 PSENENQ9NZ42 101 aa4.34□□□□□ -1.71
HMGB3P24-201ENST00000433260 CACFD1Q9UGQ2 172 aa4.34□□□□□ -1.71
HMGB3P24-201ENST00000433260 UBQLN2Q9UHD9 624 aa4.34□□□□□ -1.71
HMGB3P24-201ENST00000433260 SMPXQ9UHP9 88 aa4.34□□□□□ -1.71
HMGB3P24-201ENST00000433260 PLA2G2DQ9UNK4 145 aa4.34□□□□□ -1.71
HMGB3P24-201ENST00000433260 U3KQ87 197 aa4.34□□□□□ -1.71
HMGB3P24-201ENST00000433260 TRRAPQ9Y4A5 3859 aa4.34□□□□□ -1.71
HMGB3P24-201ENST00000433260 ANK2Q01484 3957 aa4.33□□□□□ -1.72
HMGB3P24-201ENST00000433260 TRAV30A0A087WSZ9 112 aa4.33□□□□□ -1.72
HMGB3P24-201ENST00000433260 C5orf51A6NDU8 294 aa4.33□□□□□ -1.72
HMGB3P24-201ENST00000433260 C15orf62A8K5M9 175 aa4.33□□□□□ -1.72
HMGB3P24-201ENST00000433260 OR11H12B2RN74 326 aa4.33□□□□□ -1.72
HMGB3P24-201ENST00000433260 CHEK1O14757 476 aa4.33□□□□□ -1.72
HMGB3P24-201ENST00000433260 IGHV4-30-4P0DP06 118 aa4.33□□□□□ -1.72
HMGB3P24-201ENST00000433260 SLC25A4P12235 298 aa4.33□□□□□ -1.72
HMGB3P24-201ENST00000433260 SLC25A6P12236 298 aa4.33□□□□□ -1.72
HMGB3P24-201ENST00000433260 NPPCP23582 126 aa4.33□□□□□ -1.72
HMGB3P24-201ENST00000433260 FCGR2BP31994 310 aaPredicted RBP4.33□□□□□ -1.72
HMGB3P24-201ENST00000433260 NKX2-1P43699 371 aaPredicted RBP4.33□□□□□ -1.72
HMGB3P24-201ENST00000433260 ELLP55199 621 aaPredicted RBP4.33□□□□□ -1.72
HMGB3P24-201ENST00000433260 RAB11AP62491 216 aa4.33□□□□□ -1.72
HMGB3P24-201ENST00000433260 RPP30P78346 268 aaKnown RBP4.33□□□□□ -1.72
HMGB3P24-201ENST00000433260 ASAH1Q13510 395 aa4.33□□□□□ -1.72
HMGB3P24-201ENST00000433260 DCTN2Q13561 401 aaKnown RBP4.33□□□□□ -1.72
HMGB3P24-201ENST00000433260 GAMTQ14353 236 aa4.33□□□□□ -1.72
HMGB3P24-201ENST00000433260 IAH1Q2TAA2 248 aaPredicted RBP4.33□□□□□ -1.72
HMGB3P24-201ENST00000433260 LAMTOR1Q6IAA8 161 aa4.33□□□□□ -1.72
HMGB3P24-201ENST00000433260 ZNF600Q6ZNG1 722 aa4.33□□□□□ -1.72
HMGB3P24-201ENST00000433260 NRARPQ7Z6K4 114 aa4.33□□□□□ -1.72
HMGB3P24-201ENST00000433260 NOXA1Q86UR1 476 aa4.33□□□□□ -1.72
HMGB3P24-201ENST00000433260 GBGT1Q8N5D6 347 aa4.33□□□□□ -1.72
HMGB3P24-201ENST00000433260 OR2K2Q8NGT1 345 aa4.33□□□□□ -1.72
HMGB3P24-201ENST00000433260 OR4X1Q8NH49 305 aa4.33□□□□□ -1.72
HMGB3P24-201ENST00000433260 RNASEH2CQ8TDP1 164 aaKnown RBP4.33□□□□□ -1.72
HMGB3P24-201ENST00000433260 ZNF431Q8TF32 576 aaPredicted RBP4.33□□□□□ -1.72
HMGB3P24-201ENST00000433260 MITD1Q8WV92 249 aa4.33□□□□□ -1.72
HMGB3P24-201ENST00000433260 MARC2Q969Z3 335 aa4.33□□□□□ -1.72
HMGB3P24-201ENST00000433260 ATP6V0BQ99437 205 aa4.33□□□□□ -1.72
HMGB3P24-201ENST00000433260 RNF2Q99496 336 aa4.33□□□□□ -1.72
HMGB3P24-201ENST00000433260 DAZ1Q9NQZ3 744 aaKnown RBP4.33□□□□□ -1.72
HMGB3P24-201ENST00000433260 VWFP04275 2813 aa4.32□□□□□ -1.72
HMGB3P24-201ENST00000433260 LOC100996750A0A140TA64 210 aa4.32□□□□□ -1.72
HMGB3P24-201ENST00000433260 ZFP92A6NM28 416 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms