RNA–Protein interactions for RNA: ENST00000429650.1

SNRNP200-202, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 2

Gene SNRNP200, Length 2,637 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-202ENST00000429650 NAT8BQ9UHF3 227 aa10.76□□□□□ -0.69
SNRNP200-202ENST00000429650 NAV3Q8IVL0 2385 aa10.76□□□□□ -0.69
SNRNP200-202ENST00000429650 PPIAL4EA0A075B759 164 aa10.76□□□□□ -0.69
SNRNP200-202ENST00000429650 A0A0G2JNJ9 132 aa10.76□□□□□ -0.69
SNRNP200-202ENST00000429650 PPIAL4DF5H284 164 aa10.76□□□□□ -0.69
SNRNP200-202ENST00000429650 MT-ND6P03923 174 aa10.76□□□□□ -0.69
SNRNP200-202ENST00000429650 PPIAL4FP0DN26 164 aa10.76□□□□□ -0.69
SNRNP200-202ENST00000429650 MGST1P10620 155 aaKnown RBP10.76□□□□□ -0.69
SNRNP200-202ENST00000429650 APOBEC3AP31941 199 aaPredicted RBP10.76□□□□□ -0.69
SNRNP200-202ENST00000429650 TCL1AP56279 114 aa10.76□□□□□ -0.69
SNRNP200-202ENST00000429650 RPL19P84098 196 aaKnown RBP10.76□□□□□ -0.69
SNRNP200-202ENST00000429650 IBA57Q5T440 356 aaKnown RBP10.76□□□□□ -0.69
SNRNP200-202ENST00000429650 TPTE2P1Q5T6R2 138 aa10.76□□□□□ -0.69
SNRNP200-202ENST00000429650 TMEM136Q6ZRR5 245 aa10.76□□□□□ -0.69
SNRNP200-202ENST00000429650 PDPNQ86YL7 162 aa10.76□□□□□ -0.69
SNRNP200-202ENST00000429650 OR5AU1Q8NGC0 362 aa10.76□□□□□ -0.69
SNRNP200-202ENST00000429650 OR4A5Q8NH83 315 aa10.76□□□□□ -0.69
SNRNP200-202ENST00000429650 H1FXQ92522 213 aaKnown RBP10.76□□□□□ -0.69
SNRNP200-202ENST00000429650 SAP30LQ9HAJ7 183 aa10.76□□□□□ -0.69
SNRNP200-202ENST00000429650 Q9UFV3 132 aa10.76□□□□□ -0.69
SNRNP200-202ENST00000429650 PPIAL4AQ9Y536 164 aa10.76□□□□□ -0.69
SNRNP200-202ENST00000429650 TMEM178BH3BS89 294 aa10.75□□□□□ -0.69
SNRNP200-202ENST00000429650 SLC35B1P78383 322 aa10.75□□□□□ -0.69
SNRNP200-202ENST00000429650 BSPH1Q075Z2 132 aa10.75□□□□□ -0.69
SNRNP200-202ENST00000429650 SHISA2Q6UWI4 295 aa10.75□□□□□ -0.69
SNRNP200-202ENST00000429650 TOMM20LQ6UXN7 152 aa10.75□□□□□ -0.69
SNRNP200-202ENST00000429650 VSTM2AQ8TAG5 236 aa10.75□□□□□ -0.69
SNRNP200-202ENST00000429650 GNB4Q9HAV0 340 aa10.75□□□□□ -0.69
SNRNP200-202ENST00000429650 ZGRF1Q86YA3 2104 aa10.75□□□□□ -0.69
SNRNP200-202ENST00000429650 ZNF318Q5VUA4 2279 aa10.75□□□□□ -0.69
SNRNP200-202ENST00000429650 IGLV2-23P01705 113 aa10.75□□□□□ -0.69
SNRNP200-202ENST00000429650 FAM71F2Q6NXP2 309 aa10.75□□□□□ -0.69
SNRNP200-202ENST00000429650 LYPD2Q6UXB3 125 aa10.75□□□□□ -0.69
SNRNP200-202ENST00000429650 SNHG12Q9BXW3 62 aa10.75□□□□□ -0.69
SNRNP200-202ENST00000429650 ZNF430Q9H8G1 570 aaPredicted RBP10.75□□□□□ -0.69
SNRNP200-202ENST00000429650 ZNF355PQ9NSJ1 428 aa10.75□□□□□ -0.69
SNRNP200-202ENST00000429650 CDC42EP3Q9UKI2 254 aa10.75□□□□□ -0.69
SNRNP200-202ENST00000429650 COL12A1Q99715 3063 aa10.75□□□□□ -0.69
SNRNP200-202ENST00000429650 MUC6Q6W4X9 2439 aa10.75□□□□□ -0.69
SNRNP200-202ENST00000429650 SMIM27A0A1W2PRY6 76 aa10.74□□□□□ -0.69
SNRNP200-202ENST00000429650 COX7A2P2O60397 106 aa10.74□□□□□ -0.69
SNRNP200-202ENST00000429650 THBDP07204 575 aa10.74□□□□□ -0.69
SNRNP200-202ENST00000429650 PYYP10082 97 aa10.74□□□□□ -0.69
SNRNP200-202ENST00000429650 CDKN1AP38936 164 aa10.74□□□□□ -0.69
SNRNP200-202ENST00000429650 TEX43Q6ZNM6 134 aa10.74□□□□□ -0.69
SNRNP200-202ENST00000429650 LINC00311Q8N616 119 aa10.74□□□□□ -0.69
SNRNP200-202ENST00000429650 NPIPB3Q92617 1050 aa10.74□□□□□ -0.69
SNRNP200-202ENST00000429650 ST6GALNAC6Q969X2 333 aa10.74□□□□□ -0.69
SNRNP200-202ENST00000429650 TMEM186Q96B77 213 aa10.74□□□□□ -0.69
SNRNP200-202ENST00000429650 SAMD10Q9BYL1 202 aa10.74□□□□□ -0.69
SNRNP200-202ENST00000429650 MSRB2Q9Y3D2 182 aa10.74□□□□□ -0.69
SNRNP200-202ENST00000429650 IGKV1D-37A0A075B6S9 117 aa10.74□□□□□ -0.69
SNRNP200-202ENST00000429650 TNFRSF13BO14836 293 aaPredicted RBP10.74□□□□□ -0.69
SNRNP200-202ENST00000429650 CRYGCP07315 174 aa10.74□□□□□ -0.69
SNRNP200-202ENST00000429650 COX19Q49B96 90 aa10.74□□□□□ -0.69
SNRNP200-202ENST00000429650 C10orf113Q5VZT2 155 aa10.74□□□□□ -0.69
SNRNP200-202ENST00000429650 PATE2Q6UY27 113 aa10.74□□□□□ -0.69
SNRNP200-202ENST00000429650 NHLRC2Q8NBF2 726 aa10.74□□□□□ -0.69
SNRNP200-202ENST00000429650 CCL17Q92583 94 aa10.74□□□□□ -0.69
SNRNP200-202ENST00000429650 LINC00479Q96M42 142 aa10.74□□□□□ -0.69
SNRNP200-202ENST00000429650 SERTAD4Q9NUC0 356 aa10.74□□□□□ -0.69
SNRNP200-202ENST00000429650 WASHC3Q9Y3C0 194 aa10.74□□□□□ -0.69
SNRNP200-202ENST00000429650 SPTA1P02549 2419 aa10.74□□□□□ -0.69
SNRNP200-202ENST00000429650 TCRBV4S1A1TA0A5B7 111 aa10.73□□□□□ -0.69
SNRNP200-202ENST00000429650 NDUFB3O43676 98 aa10.73□□□□□ -0.69
SNRNP200-202ENST00000429650 IGHV3-48P01763 117 aa10.73□□□□□ -0.69
SNRNP200-202ENST00000429650 AMY1AP04745 511 aa10.73□□□□□ -0.69
SNRNP200-202ENST00000429650 KIAA1644Q3SXP7 199 aa10.73□□□□□ -0.69
SNRNP200-202ENST00000429650 C8orf31Q8N9H6 132 aa10.73□□□□□ -0.69
SNRNP200-202ENST00000429650 OR1L4Q8NGR5 311 aa10.73□□□□□ -0.69
SNRNP200-202ENST00000429650 PAXXQ9BUH6 204 aa10.73□□□□□ -0.69
SNRNP200-202ENST00000429650 MRPL36Q9P0J6 103 aaKnown RBP10.73□□□□□ -0.69
SNRNP200-202ENST00000429650 PLXNB1O43157 2135 aa10.73□□□□□ -0.69
SNRNP200-202ENST00000429650 KLK10O43240 276 aa10.73□□□□□ -0.69
SNRNP200-202ENST00000429650 SUB1P53999 127 aaKnown RBP eCLIP10.73□□□□□ -0.691e-6■■■■■ 43.2
SNRNP200-202ENST00000429650 TDRG1Q3Y452 100 aa10.73□□□□□ -0.69
SNRNP200-202ENST00000429650 LRRC10Q5BKY1 277 aa10.73□□□□□ -0.69
SNRNP200-202ENST00000429650 MRPL54Q6P161 138 aaKnown RBP10.73□□□□□ -0.69
SNRNP200-202ENST00000429650 PRSS57Q6UWY2 283 aa10.73□□□□□ -0.69
SNRNP200-202ENST00000429650 THAP8Q8NA92 274 aa10.73□□□□□ -0.69
SNRNP200-202ENST00000429650 CTSZQ9UBR2 303 aa10.73□□□□□ -0.69
SNRNP200-202ENST00000429650 AMMECR1Q9Y4X0 333 aaPredicted RBP10.73□□□□□ -0.69
SNRNP200-202ENST00000429650 FSTL3O95633 263 aa10.72□□□□□ -0.69
SNRNP200-202ENST00000429650 CA1P00915 261 aaPredicted RBP10.72□□□□□ -0.69
SNRNP200-202ENST00000429650 GAGE1Q13065 139 aa10.72□□□□□ -0.69
SNRNP200-202ENST00000429650 OR10J3Q5JRS4 329 aa10.72□□□□□ -0.69
SNRNP200-202ENST00000429650 ZNF329Q86UD4 541 aa10.72□□□□□ -0.69
SNRNP200-202ENST00000429650 TPSG1Q9NRR2 321 aa10.72□□□□□ -0.69
SNRNP200-202ENST00000429650 PRRG2O14669 202 aa10.72□□□□□ -0.69
SNRNP200-202ENST00000429650 HLA-DQA1P01909 254 aa10.72□□□□□ -0.69
SNRNP200-202ENST00000429650 LOXP28300 417 aaPredicted RBP10.72□□□□□ -0.69
SNRNP200-202ENST00000429650 BRS3P32247 399 aa10.72□□□□□ -0.69
SNRNP200-202ENST00000429650 ZNF137PP52743 207 aa10.72□□□□□ -0.69
SNRNP200-202ENST00000429650 DLX6P56179 175 aa10.72□□□□□ -0.69
SNRNP200-202ENST00000429650 NHLH1Q02575 133 aa10.72□□□□□ -0.69
SNRNP200-202ENST00000429650 SIGLECL1Q8N7X8 197 aa10.72□□□□□ -0.69
SNRNP200-202ENST00000429650 FAM168AQ92567 244 aa10.72□□□□□ -0.69
SNRNP200-202ENST00000429650 RNF114Q9Y508 228 aa10.72□□□□□ -0.69
SNRNP200-202ENST00000429650 A0A1W2PPI3 338 aa10.71□□□□□ -0.69
SNRNP200-202ENST00000429650 IZUMO1RA6ND01 250 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 97.1 ms