RNA–Protein interactions for RNA: ENST00000429277.6

LDB3-205, Transcript of LIM domain binding 3, humanhuman

TSL 2 BASIC

Gene LDB3, Length 5,436 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-205ENST00000429277 LAMTOR2Q9Y2Q5 125 aa10.58□□□□□ -0.72
LDB3-205ENST00000429277 CHTOPQ9Y3Y2 248 aaKnown RBP10.58□□□□□ -0.72
LDB3-205ENST00000429277 ZNF318Q5VUA4 2279 aa10.58□□□□□ -0.72
LDB3-205ENST00000429277 TRBV7-1A0A0A6YYK4 115 aa10.58□□□□□ -0.72
LDB3-205ENST00000429277 MUC21A0A0G2JKD1 596 aa10.58□□□□□ -0.72
LDB3-205ENST00000429277 MUC21A0A140T8X8 626 aa10.58□□□□□ -0.72
LDB3-205ENST00000429277 A0A1B0GW64 132 aa10.58□□□□□ -0.72
LDB3-205ENST00000429277 IGHV1-8P0DP01 117 aa10.58□□□□□ -0.72
LDB3-205ENST00000429277 OR5A1Q8NGJ0 315 aa10.58□□□□□ -0.72
LDB3-205ENST00000429277 PATJQ8NI35 1801 aa10.58□□□□□ -0.72
LDB3-205ENST00000429277 ADARB2-AS1A8MUL3 147 aa10.57□□□□□ -0.72
LDB3-205ENST00000429277 TPTE2P1Q5T6R2 138 aa10.57□□□□□ -0.72
LDB3-205ENST00000429277 GGNQ86UU5 652 aa10.57□□□□□ -0.72
LDB3-205ENST00000429277 USMG5Q96IX5 58 aa10.57□□□□□ -0.72
LDB3-205ENST00000429277 MS4A6AQ9H2W1 248 aa10.57□□□□□ -0.72
LDB3-205ENST00000429277 RALGAPA2Q2PPJ7 1873 aa10.57□□□□□ -0.72
LDB3-205ENST00000429277 PYYP10082 97 aa10.57□□□□□ -0.72
LDB3-205ENST00000429277 LHFPL1Q86WI0 220 aa10.57□□□□□ -0.72
LDB3-205ENST00000429277 FAM19A2Q8N3H0 131 aa10.57□□□□□ -0.72
LDB3-205ENST00000429277 IGKCP01834 107 aa10.57□□□□□ -0.72
LDB3-205ENST00000429277 C1QTNF9P0C862 333 aa10.57□□□□□ -0.72
LDB3-205ENST00000429277 ADMP35318 185 aa10.57□□□□□ -0.72
LDB3-205ENST00000429277 PAX2Q02962 417 aa10.57□□□□□ -0.72
LDB3-205ENST00000429277 SRSF8Q9BRL6 282 aaKnown RBP10.57□□□□□ -0.72
LDB3-205ENST00000429277 FBLN7Q53RD9 439 aa10.57□□□□□ -0.72
LDB3-205ENST00000429277 LY96Q9Y6Y9 160 aa10.57□□□□□ -0.72
LDB3-205ENST00000429277 PIKFYVEQ9Y2I7 2098 aa10.57□□□□□ -0.72
LDB3-205ENST00000429277 TMEM178BH3BS89 294 aa10.56□□□□□ -0.72
LDB3-205ENST00000429277 ZNF585BQ52M93 769 aa10.56□□□□□ -0.72
LDB3-205ENST00000429277 TREML4Q6UXN2 200 aa10.56□□□□□ -0.72
LDB3-205ENST00000429277 LYPD1Q8N2G4 141 aa10.56□□□□□ -0.72
LDB3-205ENST00000429277 PHLDA1Q8WV24 401 aaPredicted RBP10.56□□□□□ -0.72
LDB3-205ENST00000429277 NABP1Q96AH0 204 aa10.56□□□□□ -0.72
LDB3-205ENST00000429277 C1QTNF4Q9BXJ3 329 aa10.56□□□□□ -0.72
LDB3-205ENST00000429277 ZNF236Q9UL36 1845 aa10.56□□□□□ -0.72
LDB3-205ENST00000429277 WDR90Q96KV7 1748 aa10.56□□□□□ -0.72
LDB3-205ENST00000429277 PLXNA1Q9UIW2 1896 aa10.56□□□□□ -0.72
LDB3-205ENST00000429277 CRIPAKQ8N1N5 446 aa10.56□□□□□ -0.72
LDB3-205ENST00000429277 OCC1Q8TAD7 63 aa10.56□□□□□ -0.72
LDB3-205ENST00000429277 CHCHD5Q9BSY4 110 aa10.56□□□□□ -0.72
LDB3-205ENST00000429277 SPTBP11277 2137 aa10.56□□□□□ -0.72
LDB3-205ENST00000429277 TAF1LQ8IZX4 1826 aa10.56□□□□□ -0.72
LDB3-205ENST00000429277 TRBV24-1A0A075B6N3 115 aa10.56□□□□□ -0.72
LDB3-205ENST00000429277 PINLYPA6NC86 204 aa10.56□□□□□ -0.72
LDB3-205ENST00000429277 IFI27L1Q96BM0 104 aa10.56□□□□□ -0.72
LDB3-205ENST00000429277 C11orf68Q9H3H3 251 aaKnown RBP10.56□□□□□ -0.72
LDB3-205ENST00000429277 ARID2Q68CP9 1835 aa10.56□□□□□ -0.72
LDB3-205ENST00000429277 TMEM238C9JI98 176 aa10.55□□□□□ -0.72
LDB3-205ENST00000429277 LINC00477Q96M19 166 aa10.55□□□□□ -0.72
LDB3-205ENST00000429277 GGTLC1Q9BX51 225 aa10.55□□□□□ -0.72
LDB3-205ENST00000429277 IGHV1-3A0A0C4DH29 117 aa10.55□□□□□ -0.72
LDB3-205ENST00000429277 LILRA1O75019 489 aa10.55□□□□□ -0.72
LDB3-205ENST00000429277 NAPSAO96009 420 aa10.55□□□□□ -0.72
LDB3-205ENST00000429277 ZNF319Q9P2F9 582 aa10.55□□□□□ -0.72
LDB3-205ENST00000429277 BRCA1P38398 1863 aaKnown RBP10.55□□□□□ -0.72
LDB3-205ENST00000429277 PRR32B1ATL7 298 aa10.55□□□□□ -0.72
LDB3-205ENST00000429277 HOXA3O43365 443 aaPredicted RBP10.55□□□□□ -0.72
LDB3-205ENST00000429277 ZNF415Q09FC8 603 aa10.55□□□□□ -0.72
LDB3-205ENST00000429277 OR9G4Q8NGQ1 327 aa10.55□□□□□ -0.72
LDB3-205ENST00000429277 GLMPQ8WWB7 406 aa10.55□□□□□ -0.72
LDB3-205ENST00000429277 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.55□□□□□ -0.72
LDB3-205ENST00000429277 SLC25A16P16260 332 aa10.55□□□□□ -0.72
LDB3-205ENST00000429277 RPL36AP83881 106 aaKnown RBP10.55□□□□□ -0.72
LDB3-205ENST00000429277 FOXL1Q12952 345 aa10.55□□□□□ -0.72
LDB3-205ENST00000429277 RPL36ALQ969Q0 106 aaKnown RBP10.55□□□□□ -0.72
LDB3-205ENST00000429277 PLEKHB2Q96CS7 222 aa10.55□□□□□ -0.72
LDB3-205ENST00000429277 NDUFAF3Q9BU61 184 aa10.55□□□□□ -0.72
LDB3-205ENST00000429277 H0YIZ8 118 aa10.55□□□□□ -0.72
LDB3-205ENST00000429277 LAGE3Q14657 143 aa10.55□□□□□ -0.72
LDB3-205ENST00000429277 C15orf32Q32M92 178 aa10.55□□□□□ -0.72
LDB3-205ENST00000429277 CLDN16Q9Y5I7 305 aa10.55□□□□□ -0.72
LDB3-205ENST00000429277 A0A0A6YYD4 124 aa10.54□□□□□ -0.72
LDB3-205ENST00000429277 GGTLC3B5MD39 225 aa10.54□□□□□ -0.72
LDB3-205ENST00000429277 FNDC10F2Z333 226 aa10.54□□□□□ -0.72
LDB3-205ENST00000429277 ERVK11-1P61568 191 aa10.54□□□□□ -0.72
LDB3-205ENST00000429277 HSD52Q0P140 79 aa10.54□□□□□ -0.72
LDB3-205ENST00000429277 FOXF2Q12947 444 aa10.54□□□□□ -0.72
LDB3-205ENST00000429277 VMO1Q7Z5L0 202 aa10.54□□□□□ -0.72
LDB3-205ENST00000429277 MBD3L4A6NDZ8 208 aaPredicted RBP10.54□□□□□ -0.72
LDB3-205ENST00000429277 MBD3L3A6NE82 208 aaPredicted RBP10.54□□□□□ -0.72
LDB3-205ENST00000429277 MBD3L5A6NJ08 208 aaPredicted RBP10.54□□□□□ -0.72
LDB3-205ENST00000429277 FAM223BA6NKX1 122 aa10.54□□□□□ -0.72
LDB3-205ENST00000429277 CD55P08174 381 aa10.54□□□□□ -0.72
LDB3-205ENST00000429277 FAM223AQ8IWN6 122 aa10.54□□□□□ -0.72
LDB3-205ENST00000429277 LINC00469Q8N7U9 141 aa10.54□□□□□ -0.72
LDB3-205ENST00000429277 MBD3L2Q8NHZ7 208 aaPredicted RBP10.54□□□□□ -0.72
LDB3-205ENST00000429277 CEP290O15078 2479 aa10.54□□□□□ -0.72
LDB3-205ENST00000429277 IGKV1-12A0A0C4DH73 117 aa10.54□□□□□ -0.72
LDB3-205ENST00000429277 IGKV1D-12P01611 117 aa10.54□□□□□ -0.72
LDB3-205ENST00000429277 TMEM200BQ69YZ2 307 aa10.54□□□□□ -0.72
LDB3-205ENST00000429277 GREB1LQ9C091 1923 aaPredicted RBP10.54□□□□□ -0.72
LDB3-205ENST00000429277 A0A087WX48 190 aa10.54□□□□□ -0.72
LDB3-205ENST00000429277 ZNF138P52744 262 aa10.54□□□□□ -0.72
LDB3-205ENST00000429277 ORAOV1Q8WV07 137 aa10.54□□□□□ -0.72
LDB3-205ENST00000429277 SNAI2O43623 268 aa10.53□□□□□ -0.72
LDB3-205ENST00000429277 CA1P00915 261 aaPredicted RBP10.53□□□□□ -0.72
LDB3-205ENST00000429277 Q6ZS49 121 aa10.53□□□□□ -0.72
LDB3-205ENST00000429277 SLC25A39Q9BZJ4 359 aaPredicted RBP10.53□□□□□ -0.72
LDB3-205ENST00000429277 CACNA1IQ9P0X4 2223 aa10.53□□□□□ -0.72
LDB3-205ENST00000429277 ATXN8Q156A1 80 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms