RNA–Protein interactions for RNA: ENST00000427779.5

PSMD4-203, Transcript of proteasome 26S subunit, non-ATPase 4, humanhuman

TSL 3

Gene PSMD4, Length 649 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD4-203ENST00000427779 NRN1Q9NPD7 142 aa12.11□□□□□ -0.47
PSMD4-203ENST00000427779 SMIM31A0A1B0GVY4 71 aa12.1□□□□□ -0.47
PSMD4-203ENST00000427779 EMP1P54849 157 aa12.1□□□□□ -0.47
PSMD4-203ENST00000427779 NEDD8Q15843 81 aa12.1□□□□□ -0.47
PSMD4-203ENST00000427779 MLANAQ16655 118 aa12.1□□□□□ -0.47
PSMD4-203ENST00000427779 BSXQ3C1V8 233 aa12.1□□□□□ -0.47
PSMD4-203ENST00000427779 RNF212Q495C1 297 aa12.1□□□□□ -0.47
PSMD4-203ENST00000427779 ZNF705AQ6ZN79 300 aaPredicted RBP12.1□□□□□ -0.47
PSMD4-203ENST00000427779 RRNAD1Q96FB5 475 aaKnown RBP12.1□□□□□ -0.47
PSMD4-203ENST00000427779 ZNF705FA8MVS1 300 aaPredicted RBP12.09□□□□□ -0.47
PSMD4-203ENST00000427779 GSTZ1O43708 216 aaPredicted RBP12.09□□□□□ -0.47
PSMD4-203ENST00000427779 IGLC1P0CG04 106 aa12.09□□□□□ -0.47
PSMD4-203ENST00000427779 ZNF705DP0CH99 300 aaPredicted RBP12.09□□□□□ -0.47
PSMD4-203ENST00000427779 ZNF705BP0CI00 300 aaPredicted RBP12.09□□□□□ -0.47
PSMD4-203ENST00000427779 HLA-DRB4P13762 266 aa12.09□□□□□ -0.47
PSMD4-203ENST00000427779 HTR2BP41595 481 aa12.09□□□□□ -0.47
PSMD4-203ENST00000427779 PIGPP57054 158 aa12.09□□□□□ -0.47
PSMD4-203ENST00000427779 YPEL3P61236 119 aaPredicted RBP12.09□□□□□ -0.47
PSMD4-203ENST00000427779 TRIM16LQ309B1 348 aa12.09□□□□□ -0.47
PSMD4-203ENST00000427779 C1orf134Q5TEV5 83 aa12.09□□□□□ -0.47
PSMD4-203ENST00000427779 RNASE11Q8TAA1 199 aaKnown RBP12.09□□□□□ -0.47
PSMD4-203ENST00000427779 TP53RKQ96S44 253 aa12.09□□□□□ -0.47
PSMD4-203ENST00000427779 PLA2G2EQ9NZK7 142 aa12.09□□□□□ -0.47
PSMD4-203ENST00000427779 RFNGQ9Y644 331 aa12.09□□□□□ -0.47
PSMD4-203ENST00000427779 HLA-DRB4X5D2U9 266 aa12.09□□□□□ -0.47
PSMD4-203ENST00000427779 NACAE9PAV3 2078 aa12.09□□□□□ -0.47
PSMD4-203ENST00000427779 SLC25A4P12235 298 aa12.08□□□□□ -0.48
PSMD4-203ENST00000427779 OR10J1P30954 320 aa12.08□□□□□ -0.48
PSMD4-203ENST00000427779 RPS19P39019 145 aaKnown RBP12.08□□□□□ -0.48
PSMD4-203ENST00000427779 NKX2-1P43699 371 aaPredicted RBP12.08□□□□□ -0.48
PSMD4-203ENST00000427779 SIGLEC15Q6ZMC9 328 aa12.08□□□□□ -0.48
PSMD4-203ENST00000427779 NIPSNAP3BQ9BS92 247 aa12.08□□□□□ -0.48
PSMD4-203ENST00000427779 KRTAP4-5Q9BYR2 181 aa12.08□□□□□ -0.48
PSMD4-203ENST00000427779 C3orf85A0A1B0GTC6 90 aa12.07□□□□□ -0.48
PSMD4-203ENST00000427779 IL4P05112 153 aa12.07□□□□□ -0.48
PSMD4-203ENST00000427779 PI3P19957 117 aa12.07□□□□□ -0.48
PSMD4-203ENST00000427779 TGFBR1P36897 503 aa12.07□□□□□ -0.48
PSMD4-203ENST00000427779 RND2P52198 227 aa12.07□□□□□ -0.48
PSMD4-203ENST00000427779 DHODHQ02127 395 aa12.07□□□□□ -0.48
PSMD4-203ENST00000427779 PRSS54Q6PEW0 395 aa12.07□□□□□ -0.48
PSMD4-203ENST00000427779 SNX29P2Q8IUI4 249 aa12.07□□□□□ -0.48
PSMD4-203ENST00000427779 DKK2Q9UBU2 259 aa12.07□□□□□ -0.48
PSMD4-203ENST00000427779 HSPG2P98160 4391 aa12.06□□□□□ -0.48
PSMD4-203ENST00000427779 IGHV3OR16-12A0A075B7B8 117 aa12.06□□□□□ -0.48
PSMD4-203ENST00000427779 M0QYG6 137 aa12.06□□□□□ -0.48
PSMD4-203ENST00000427779 BUB3O43684 328 aa12.06□□□□□ -0.48
PSMD4-203ENST00000427779 SPCS3P61009 180 aa12.06□□□□□ -0.48
PSMD4-203ENST00000427779 USF2Q15853 346 aaPredicted RBP12.06□□□□□ -0.48
PSMD4-203ENST00000427779 CCDC71LQ8N9Z2 235 aa12.06□□□□□ -0.48
PSMD4-203ENST00000427779 OR52E5Q8NH55 327 aa12.06□□□□□ -0.48
PSMD4-203ENST00000427779 RNASEH2CQ8TDP1 164 aaKnown RBP12.06□□□□□ -0.48
PSMD4-203ENST00000427779 COPZ2Q9P299 210 aa12.06□□□□□ -0.48
PSMD4-203ENST00000427779 B3GALNT1O75752 331 aa12.05□□□□□ -0.48
PSMD4-203ENST00000427779 APOA1P02647 267 aa12.05□□□□□ -0.48
PSMD4-203ENST00000427779 NUP62P37198 522 aaPredicted RBP12.05□□□□□ -0.48
PSMD4-203ENST00000427779 OXA1LQ15070 435 aa12.05□□□□□ -0.48
PSMD4-203ENST00000427779 C2orf83Q53S99 150 aa12.05□□□□□ -0.48
PSMD4-203ENST00000427779 RNASE10Q5GAN6 216 aaKnown RBP12.05□□□□□ -0.48
PSMD4-203ENST00000427779 FAM222AQ5U5X8 452 aa12.05□□□□□ -0.48
PSMD4-203ENST00000427779 ETFRF1Q6IPR1 90 aa12.05□□□□□ -0.48
PSMD4-203ENST00000427779 FAM219AQ8IW50 185 aa12.05□□□□□ -0.48
PSMD4-203ENST00000427779 ARRDC1Q8N5I2 433 aa12.05□□□□□ -0.48
PSMD4-203ENST00000427779 HEYLQ9NQ87 328 aaPredicted RBP12.05□□□□□ -0.48
PSMD4-203ENST00000427779 A0A0G2JRQ6 117 aa12.04□□□□□ -0.48
PSMD4-203ENST00000427779 TOMM40O96008 361 aa12.04□□□□□ -0.48
PSMD4-203ENST00000427779 HTN3P15516 51 aa12.04□□□□□ -0.48
PSMD4-203ENST00000427779 UCP1P25874 307 aa12.04□□□□□ -0.48
PSMD4-203ENST00000427779 FAM3BP58499 235 aaPredicted RBP12.04□□□□□ -0.48
PSMD4-203ENST00000427779 AARDQ4LEZ3 155 aa12.04□□□□□ -0.48
PSMD4-203ENST00000427779 LHFPL1Q86WI0 220 aa12.04□□□□□ -0.48
PSMD4-203ENST00000427779 SLC24A4Q8NFF2 622 aa12.04□□□□□ -0.48
PSMD4-203ENST00000427779 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.04□□□□□ -0.48
PSMD4-203ENST00000427779 COMMD3Q9UBI1 195 aa12.04□□□□□ -0.48
PSMD4-203ENST00000427779 PFDN2Q9UHV9 154 aa12.04□□□□□ -0.48
PSMD4-203ENST00000427779 CDK2AP2O75956 126 aa12.03□□□□□ -0.48
PSMD4-203ENST00000427779 IGKV3-20P01619 116 aa12.03□□□□□ -0.48
PSMD4-203ENST00000427779 RD3LP0DJH9 198 aa12.03□□□□□ -0.48
PSMD4-203ENST00000427779 ID1P41134 155 aa12.03□□□□□ -0.48
PSMD4-203ENST00000427779 FXYD7P58549 80 aa12.03□□□□□ -0.48
PSMD4-203ENST00000427779 SP6Q3SY56 376 aa12.03□□□□□ -0.48
PSMD4-203ENST00000427779 FOXI2Q6ZQN5 318 aa12.03□□□□□ -0.48
PSMD4-203ENST00000427779 ZFAND1Q8TCF1 268 aa12.03□□□□□ -0.48
PSMD4-203ENST00000427779 CLUHP3Q96NS8 147 aa12.03□□□□□ -0.48
PSMD4-203ENST00000427779 SAV1Q9H4B6 383 aaPredicted RBP12.03□□□□□ -0.48
PSMD4-203ENST00000427779 GOLT1BQ9Y3E0 138 aa12.03□□□□□ -0.48
PSMD4-203ENST00000427779 TMED3Q9Y3Q3 217 aa12.03□□□□□ -0.48
PSMD4-203ENST00000427779 C16orf90A8MZG2 172 aa12.02□□□□□ -0.49
PSMD4-203ENST00000427779 HBE1P02100 147 aa12.02□□□□□ -0.49
PSMD4-203ENST00000427779 TBPP20226 339 aa12.02□□□□□ -0.49
PSMD4-203ENST00000427779 LSM3P62310 102 aaKnown RBP12.02□□□□□ -0.49
PSMD4-203ENST00000427779 GDF5OSQ5U4N7 250 aa12.02□□□□□ -0.49
PSMD4-203ENST00000427779 SPATA31B1PQ5VZV4 182 aa12.02□□□□□ -0.49
PSMD4-203ENST00000427779 NOXA1Q86UR1 476 aa12.02□□□□□ -0.49
PSMD4-203ENST00000427779 C15orf53Q8NAA6 179 aa12.02□□□□□ -0.49
PSMD4-203ENST00000427779 NPIPB3Q92617 1050 aa12.02□□□□□ -0.49
PSMD4-203ENST00000427779 LINC00052Q96N35 136 aa12.02□□□□□ -0.49
PSMD4-203ENST00000427779 C7orf50Q9BRJ6 194 aaKnown RBP12.02□□□□□ -0.49
PSMD4-203ENST00000427779 CEBPZOSA8MTT3 80 aa12.01□□□□□ -0.49
PSMD4-203ENST00000427779 PSMB3P49720 205 aa12.01□□□□□ -0.49
PSMD4-203ENST00000427779 TMEM88Q6PEY1 159 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms