RNA–Protein interactions for RNA: ENST00000427455.1

HERPUD2-205, Transcript of HERPUD family member 2, humanhuman

TSL 3

Gene HERPUD2, Length 672 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-205ENST00000427455 STRAPQ9Y3F4 350 aaKnown RBP19.01■□□□□ 0.63
HERPUD2-205ENST00000427455 PUS1Q9Y606 427 aaKnown RBP eCLIP19.01■□□□□ 0.63
HERPUD2-205ENST00000427455 IZUMO1RA6ND01 250 aa19■□□□□ 0.63
HERPUD2-205ENST00000427455 PTTG1O95997 202 aa19■□□□□ 0.63
HERPUD2-205ENST00000427455 OR10J1P30954 320 aa19■□□□□ 0.63
HERPUD2-205ENST00000427455 BTNL8Q6UX41 500 aa19■□□□□ 0.63
HERPUD2-205ENST00000427455 TOMM20LQ6UXN7 152 aa19■□□□□ 0.63
HERPUD2-205ENST00000427455 GSG1LQ6UXU4 331 aa19■□□□□ 0.63
HERPUD2-205ENST00000427455 NPIPB3Q92617 1050 aa19■□□□□ 0.63
HERPUD2-205ENST00000427455 SLC35E1Q96K37 410 aa19■□□□□ 0.63
HERPUD2-205ENST00000427455 RAB40CQ96S21 281 aa19■□□□□ 0.63
HERPUD2-205ENST00000427455 GINS3Q9BRX5 216 aa19■□□□□ 0.63
HERPUD2-205ENST00000427455 RCL1Q9Y2P8 373 aaKnown RBP19■□□□□ 0.63
HERPUD2-205ENST00000427455 ZNF207O43670 478 aaKnown RBP18.99■□□□□ 0.63
HERPUD2-205ENST00000427455 MBPP02686 304 aaPredicted RBP18.99■□□□□ 0.63
HERPUD2-205ENST00000427455 TIGITQ495A1 244 aa18.99■□□□□ 0.63
HERPUD2-205ENST00000427455 DEFB121Q5J5C9 76 aa18.99■□□□□ 0.63
HERPUD2-205ENST00000427455 SMIM8Q96KF7 97 aa18.99■□□□□ 0.63
HERPUD2-205ENST00000427455 C2orf50Q96LR7 162 aa18.99■□□□□ 0.63
HERPUD2-205ENST00000427455 ZFAND3Q9H8U3 227 aa18.99■□□□□ 0.63
HERPUD2-205ENST00000427455 PSENENQ9NZ42 101 aa18.99■□□□□ 0.63
HERPUD2-205ENST00000427455 LSM4Q9Y4Z0 139 aaKnown RBP18.99■□□□□ 0.63
HERPUD2-205ENST00000427455 PRSS46E5RG02 174 aa18.97■□□□□ 0.63
HERPUD2-205ENST00000427455 TAS2R30P59541 319 aa18.97■□□□□ 0.63
HERPUD2-205ENST00000427455 GAMTQ14353 236 aa18.97■□□□□ 0.63
HERPUD2-205ENST00000427455 TMEM61Q8N0U2 210 aa18.97■□□□□ 0.63
HERPUD2-205ENST00000427455 TRAV14DV4A0A0A6YYC5 116 aa18.96■□□□□ 0.63
HERPUD2-205ENST00000427455 IGHV7-4-1A0A0J9YVY3 117 aa18.96■□□□□ 0.63
HERPUD2-205ENST00000427455 PAX9P55771 341 aa18.96■□□□□ 0.63
HERPUD2-205ENST00000427455 YPEL3P61236 119 aaPredicted RBP18.96■□□□□ 0.63
HERPUD2-205ENST00000427455 SMPXQ9UHP9 88 aa18.96■□□□□ 0.63
HERPUD2-205ENST00000427455 TSC22D2O75157 780 aa18.95■□□□□ 0.62
HERPUD2-205ENST00000427455 GTSCR1Q86UQ5 136 aa18.95■□□□□ 0.62
HERPUD2-205ENST00000427455 WDR89Q96FK6 387 aaPredicted RBP18.95■□□□□ 0.62
HERPUD2-205ENST00000427455 SELENOKQ9Y6D0 94 aa18.95■□□□□ 0.62
HERPUD2-205ENST00000427455 SMAD5-AS1Q9Y6J3 95 aa18.95■□□□□ 0.62
HERPUD2-205ENST00000427455 TGP01266 2768 aa18.94■□□□□ 0.62
HERPUD2-205ENST00000427455 TRAV25A0A0B4J276 109 aa18.94■□□□□ 0.62
HERPUD2-205ENST00000427455 K7EPK0 472 aa18.94■□□□□ 0.62
HERPUD2-205ENST00000427455 GOSR2O14653 212 aa18.94■□□□□ 0.62
HERPUD2-205ENST00000427455 SCAF4O95104 1147 aaKnown RBP18.94■□□□□ 0.62
HERPUD2-205ENST00000427455 GUCA2BQ16661 112 aa18.94■□□□□ 0.62
HERPUD2-205ENST00000427455 TMEM14EPQ6UXP3 125 aa18.94■□□□□ 0.62
HERPUD2-205ENST00000427455 Q8WTZ3 238 aa18.94■□□□□ 0.62
HERPUD2-205ENST00000427455 LSM5Q9Y4Y9 91 aaKnown RBP18.94■□□□□ 0.62
HERPUD2-205ENST00000427455 C7orf66A4D0T2 115 aa18.93■□□□□ 0.62
HERPUD2-205ENST00000427455 ZFP92A6NM28 416 aa18.93■□□□□ 0.62
HERPUD2-205ENST00000427455 ZNF785A8K8V0 405 aa18.93■□□□□ 0.62
HERPUD2-205ENST00000427455 TOMM40O96008 361 aa18.93■□□□□ 0.62
HERPUD2-205ENST00000427455 BMI1P35226 326 aa18.93■□□□□ 0.62
HERPUD2-205ENST00000427455 IL15RAQ13261 267 aa18.93■□□□□ 0.62
HERPUD2-205ENST00000427455 RBPMS2Q6ZRY4 209 aaKnown RBP18.93■□□□□ 0.62
HERPUD2-205ENST00000427455 RHPN1-AS1Q9BWJ2 59 aa18.93■□□□□ 0.62
HERPUD2-205ENST00000427455 L7N2F9 121 aa18.92■□□□□ 0.62
HERPUD2-205ENST00000427455 CHEK1O14757 476 aa18.92■□□□□ 0.62
HERPUD2-205ENST00000427455 S100A10P60903 97 aa18.92■□□□□ 0.62
HERPUD2-205ENST00000427455 VAMP2P63027 116 aa18.92■□□□□ 0.62
HERPUD2-205ENST00000427455 LAMTOR1Q6IAA8 161 aa18.92■□□□□ 0.62
HERPUD2-205ENST00000427455 OR8G2PQ6IF36 304 aa18.92■□□□□ 0.62
HERPUD2-205ENST00000427455 ACOT7LQ6ZUV0 252 aa18.92■□□□□ 0.62
HERPUD2-205ENST00000427455 METTL26Q96S19 204 aa18.92■□□□□ 0.62
HERPUD2-205ENST00000427455 IGHV3-49A0A0A0MS15 119 aa18.91■□□□□ 0.62
HERPUD2-205ENST00000427455 PMS2P5A8MQ11 134 aa18.91■□□□□ 0.62
HERPUD2-205ENST00000427455 SSNA1O43805 119 aa18.91■□□□□ 0.62
HERPUD2-205ENST00000427455 METTL15P1P0C7V9 234 aa18.91■□□□□ 0.62
HERPUD2-205ENST00000427455 RD3LP0DJH9 198 aa18.91■□□□□ 0.62
HERPUD2-205ENST00000427455 Q8N1Y9 231 aa18.91■□□□□ 0.62
HERPUD2-205ENST00000427455 THAP8Q8NA92 274 aa18.91■□□□□ 0.62
HERPUD2-205ENST00000427455 IGKV1D-37A0A075B6S9 117 aa18.9■□□□□ 0.62
HERPUD2-205ENST00000427455 FABP1P07148 127 aa18.9■□□□□ 0.62
HERPUD2-205ENST00000427455 PVALBP20472 110 aaPredicted RBP18.9■□□□□ 0.62
HERPUD2-205ENST00000427455 RAB32Q13637 225 aa18.9■□□□□ 0.62
HERPUD2-205ENST00000427455 VSIRQ9H7M9 311 aa18.9■□□□□ 0.62
HERPUD2-205ENST00000427455 TSPAN4O14817 238 aa18.89■□□□□ 0.61
HERPUD2-205ENST00000427455 SIX6O95475 246 aa18.89■□□□□ 0.61
HERPUD2-205ENST00000427455 IL4P05112 153 aa18.89■□□□□ 0.61
HERPUD2-205ENST00000427455 PSG1P11464 419 aa18.89■□□□□ 0.61
HERPUD2-205ENST00000427455 NPPCP23582 126 aa18.89■□□□□ 0.61
HERPUD2-205ENST00000427455 CRYBB3P26998 211 aa18.89■□□□□ 0.61
HERPUD2-205ENST00000427455 CD81P60033 236 aa18.89■□□□□ 0.61
HERPUD2-205ENST00000427455 AKR1C1Q04828 323 aa18.89■□□□□ 0.61
HERPUD2-205ENST00000427455 RNF2Q99496 336 aa18.89■□□□□ 0.61
HERPUD2-205ENST00000427455 TRGV9Q99603 122 aa18.89■□□□□ 0.61
HERPUD2-205ENST00000427455 SPAG8Q99932 426 aaPredicted RBP18.89■□□□□ 0.61
HERPUD2-205ENST00000427455 B9D2Q9BPU9 175 aa18.89■□□□□ 0.61
HERPUD2-205ENST00000427455 NMES1Q9C002 83 aa18.89■□□□□ 0.61
HERPUD2-205ENST00000427455 C11orf1Q9H5F2 150 aa18.89■□□□□ 0.61
HERPUD2-205ENST00000427455 TMEM231Q9H6L2 316 aa18.89■□□□□ 0.61
HERPUD2-205ENST00000427455 IGHV3OR16-13A0A075B7E8 117 aa18.88■□□□□ 0.61
HERPUD2-205ENST00000427455 IGHV3-74A0A0B4J1X5 117 aa18.88■□□□□ 0.61
HERPUD2-205ENST00000427455 CCNKO75909 580 aa18.88■□□□□ 0.61
HERPUD2-205ENST00000427455 DLK1P80370 383 aa18.88■□□□□ 0.61
HERPUD2-205ENST00000427455 ZNF90Q03938 601 aa18.88■□□□□ 0.61
HERPUD2-205ENST00000427455 OR10P1Q8NGE3 313 aa18.88■□□□□ 0.61
HERPUD2-205ENST00000427455 OR51G1Q8NGK1 321 aa18.88■□□□□ 0.61
HERPUD2-205ENST00000427455 ST8SIA2Q92186 375 aa18.88■□□□□ 0.61
HERPUD2-205ENST00000427455 NARS2Q96I59 477 aaKnown RBP18.88■□□□□ 0.61
HERPUD2-205ENST00000427455 NEURL2Q9BR09 285 aa18.88■□□□□ 0.61
HERPUD2-205ENST00000427455 IGKV1OR2-108A0A075B7D4 117 aa18.87■□□□□ 0.61
HERPUD2-205ENST00000427455 A0A1W2PS18 150 aa18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms