RNA–Protein interactions for RNA: ENST00000427276.1

LINC01108-201, Transcript of long intergenic non-protein coding RNA 1108, humanhuman

TSL 2 BASIC

Gene LINC01108, Length 3,152 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01108-201ENST00000427276 SMIM15Q7Z3B0 74 aa6.12□□□□□ -1.43
LINC01108-201ENST00000427276 ZNF503Q96F45 646 aa6.12□□□□□ -1.43
LINC01108-201ENST00000427276 CST9LQ9H4G1 147 aa6.12□□□□□ -1.43
LINC01108-201ENST00000427276 KLF13Q9Y2Y9 288 aaPredicted RBP6.12□□□□□ -1.43
LINC01108-201ENST00000427276 MRPS16Q9Y3D3 137 aaKnown RBP6.12□□□□□ -1.43
LINC01108-201ENST00000427276 CACNA1HO95180 2353 aa6.12□□□□□ -1.43
LINC01108-201ENST00000427276 A0A1W2PRD5 423 aa6.12□□□□□ -1.43
LINC01108-201ENST00000427276 A0A1W2PRF3 423 aa6.12□□□□□ -1.43
LINC01108-201ENST00000427276 A0A1W2PRM7 423 aa6.12□□□□□ -1.43
LINC01108-201ENST00000427276 SP1P08047 785 aa6.12□□□□□ -1.43
LINC01108-201ENST00000427276 SSBP2P81877 361 aaPredicted RBP6.12□□□□□ -1.43
LINC01108-201ENST00000427276 CT45A1Q5HYN5 189 aa6.12□□□□□ -1.43
LINC01108-201ENST00000427276 C10orf113Q5VZT2 155 aa6.12□□□□□ -1.43
LINC01108-201ENST00000427276 CT45A3Q8NHU0 189 aa6.12□□□□□ -1.43
LINC01108-201ENST00000427276 TMEM191AQ9H0A3 160 aa6.12□□□□□ -1.43
LINC01108-201ENST00000427276 IFI27L2Q9H2X8 130 aa6.12□□□□□ -1.43
LINC01108-201ENST00000427276 GSX1Q9H4S2 264 aaPredicted RBP6.12□□□□□ -1.43
LINC01108-201ENST00000427276 IDI2-AS1Q9NZ38 188 aa6.12□□□□□ -1.43
LINC01108-201ENST00000427276 PILRBQ9UKJ0 227 aa6.12□□□□□ -1.43
LINC01108-201ENST00000427276 MED13LQ71F56 2210 aa6.12□□□□□ -1.43
LINC01108-201ENST00000427276 C15orf65H3BRN8 121 aa6.12□□□□□ -1.43
LINC01108-201ENST00000427276 PEX7O00628 323 aa6.12□□□□□ -1.43
LINC01108-201ENST00000427276 ITGB1BP1O14713 200 aa6.12□□□□□ -1.43
LINC01108-201ENST00000427276 CDKN1BP46527 198 aa6.12□□□□□ -1.43
LINC01108-201ENST00000427276 FXYD7P58549 80 aa6.12□□□□□ -1.43
LINC01108-201ENST00000427276 PRR20EP86478 221 aa6.12□□□□□ -1.43
LINC01108-201ENST00000427276 PRR20CP86479 221 aa6.12□□□□□ -1.43
LINC01108-201ENST00000427276 PRR20DP86480 221 aa6.12□□□□□ -1.43
LINC01108-201ENST00000427276 PRR20BP86481 221 aa6.12□□□□□ -1.43
LINC01108-201ENST00000427276 PRR20AP86496 221 aa6.12□□□□□ -1.43
LINC01108-201ENST00000427276 PEAR1Q5VY43 1037 aaPredicted RBP6.12□□□□□ -1.43
LINC01108-201ENST00000427276 VWA1Q6PCB0 445 aa6.12□□□□□ -1.43
LINC01108-201ENST00000427276 SLC25A33Q9BSK2 321 aa6.12□□□□□ -1.43
LINC01108-201ENST00000427276 FNDC4Q9H6D8 234 aaPredicted RBP6.12□□□□□ -1.43
LINC01108-201ENST00000427276 IGKV1D-17A0A075B6S4 117 aa6.11□□□□□ -1.43
LINC01108-201ENST00000427276 IGHV2-70DA0A0C4DH43 119 aa6.11□□□□□ -1.43
LINC01108-201ENST00000427276 LOC389332A0A1B0GUA5 103 aa6.11□□□□□ -1.43
LINC01108-201ENST00000427276 SMIM27A0A1W2PRY6 76 aa6.11□□□□□ -1.43
LINC01108-201ENST00000427276 PRSS46E5RG02 174 aa6.11□□□□□ -1.43
LINC01108-201ENST00000427276 MGST3O14880 152 aa6.11□□□□□ -1.43
LINC01108-201ENST00000427276 ENSAO43768 121 aaKnown RBP6.11□□□□□ -1.43
LINC01108-201ENST00000427276 IGLV2-8P01709 118 aa6.11□□□□□ -1.43
LINC01108-201ENST00000427276 CECR9P0C854 216 aa6.11□□□□□ -1.43
LINC01108-201ENST00000427276 HIST1H1EP10412 219 aaKnown RBP6.11□□□□□ -1.43
LINC01108-201ENST00000427276 HTR1DP28221 377 aa6.11□□□□□ -1.43
LINC01108-201ENST00000427276 TMEM249Q2WGJ8 235 aa6.11□□□□□ -1.43
LINC01108-201ENST00000427276 LINC01559Q495D7 138 aa6.11□□□□□ -1.43
LINC01108-201ENST00000427276 TMEM177Q53S58 311 aa6.11□□□□□ -1.43
LINC01108-201ENST00000427276 SPRNQ5BIV9 151 aa6.11□□□□□ -1.43
LINC01108-201ENST00000427276 RNFT1Q5M7Z0 435 aa6.11□□□□□ -1.43
LINC01108-201ENST00000427276 HCP5Q6MZN7 132 aa6.11□□□□□ -1.43
LINC01108-201ENST00000427276 WDR31Q8NA23 367 aa6.11□□□□□ -1.43
LINC01108-201ENST00000427276 OR8A1Q8NGG7 326 aa6.11□□□□□ -1.43
LINC01108-201ENST00000427276 CCL13Q99616 98 aa6.11□□□□□ -1.43
LINC01108-201ENST00000427276 SPRR3Q9UBC9 169 aa6.11□□□□□ -1.43
LINC01108-201ENST00000427276 JPT1Q9UK76 154 aa6.11□□□□□ -1.43
LINC01108-201ENST00000427276 HILPDAQ9Y5L2 63 aa6.11□□□□□ -1.43
LINC01108-201ENST00000427276 FBLL1A6NHQ2 334 aaKnown RBP6.11□□□□□ -1.43
LINC01108-201ENST00000427276 WISP2O76076 250 aa6.11□□□□□ -1.43
LINC01108-201ENST00000427276 TNFSF15O95150 251 aa6.11□□□□□ -1.43
LINC01108-201ENST00000427276 P01737 135 aa6.11□□□□□ -1.43
LINC01108-201ENST00000427276 ERHP84090 104 aaKnown RBP6.11□□□□□ -1.43
LINC01108-201ENST00000427276 OCIAD2Q56VL3 154 aa6.11□□□□□ -1.43
LINC01108-201ENST00000427276 PMS2CLQ68D20 193 aa6.11□□□□□ -1.43
LINC01108-201ENST00000427276 PDPNQ86YL7 162 aa6.11□□□□□ -1.43
LINC01108-201ENST00000427276 HARBI1Q96MB7 349 aa6.11□□□□□ -1.43
LINC01108-201ENST00000427276 CHRDL1Q9BU40 450 aa6.11□□□□□ -1.43
LINC01108-201ENST00000427276 MAP1LC3CQ9BXW4 147 aa6.11□□□□□ -1.43
LINC01108-201ENST00000427276 MEGF9Q9H1U4 602 aa6.11□□□□□ -1.43
LINC01108-201ENST00000427276 CHODLQ9H9P2 273 aa6.11□□□□□ -1.43
LINC01108-201ENST00000427276 LY96Q9Y6Y9 160 aa6.11□□□□□ -1.43
LINC01108-201ENST00000427276 TRAV30A0A087WSZ9 112 aa6.1□□□□□ -1.43
LINC01108-201ENST00000427276 TRAV8-1A0A0A6YYK1 113 aa6.1□□□□□ -1.43
LINC01108-201ENST00000427276 IGHV3-72A0A0B4J1Y9 119 aa6.1□□□□□ -1.43
LINC01108-201ENST00000427276 A0A1W2PRE2 83 aa6.1□□□□□ -1.43
LINC01108-201ENST00000427276 M0R1B8 84 aa6.1□□□□□ -1.43
LINC01108-201ENST00000427276 PSG9Q00887 426 aa6.1□□□□□ -1.43
LINC01108-201ENST00000427276 PRB3Q04118 309 aaPredicted RBP6.1□□□□□ -1.43
LINC01108-201ENST00000427276 RTL8BQ17RB0 113 aa6.1□□□□□ -1.43
LINC01108-201ENST00000427276 WFDC8Q8IUA0 241 aa6.1□□□□□ -1.43
LINC01108-201ENST00000427276 MUC15Q8N387 334 aa6.1□□□□□ -1.43
LINC01108-201ENST00000427276 GRAMD2BQ96HH9 432 aa6.1□□□□□ -1.43
LINC01108-201ENST00000427276 MUC6Q6W4X9 2439 aa6.1□□□□□ -1.43
LINC01108-201ENST00000427276 PIEZO1Q92508 2521 aa6.1□□□□□ -1.43
LINC01108-201ENST00000427276 GAGE12BA1L429 117 aa6.1□□□□□ -1.43
LINC01108-201ENST00000427276 GAGE10A6NGK3 116 aa6.1□□□□□ -1.43
LINC01108-201ENST00000427276 SRRM4A7MD48 611 aaKnown RBP6.1□□□□□ -1.43
LINC01108-201ENST00000427276 SYS1-DBNDD2H3BUS1 97 aa6.1□□□□□ -1.43
LINC01108-201ENST00000427276 NTN3O00634 580 aaPredicted RBP6.1□□□□□ -1.43
LINC01108-201ENST00000427276 SAP30O75446 220 aa6.1□□□□□ -1.43
LINC01108-201ENST00000427276 MMP23AO75900 390 aa6.1□□□□□ -1.43
LINC01108-201ENST00000427276 COL8A1P27658 744 aa6.1□□□□□ -1.43
LINC01108-201ENST00000427276 HBBP68871 147 aa6.1□□□□□ -1.43
LINC01108-201ENST00000427276 LINC00305Q7Z4B0 112 aa6.1□□□□□ -1.43
LINC01108-201ENST00000427276 OR4F17Q8NGA8 305 aa6.1□□□□□ -1.43
LINC01108-201ENST00000427276 ITLN1Q8WWA0 313 aa6.1□□□□□ -1.43
LINC01108-201ENST00000427276 SLC25A10Q9UBX3 287 aaPredicted RBP6.1□□□□□ -1.43
LINC01108-201ENST00000427276 PRNDQ9UKY0 176 aa6.1□□□□□ -1.43
LINC01108-201ENST00000427276 TMSB15BA0A087X1C1 80 aa6.1□□□□□ -1.43
LINC01108-201ENST00000427276 TEX50A0A1B0GTY4 177 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms