RNA–Protein interactions for RNA: ENST00000427076.5

POLR2J4-202, Transcript of RNA polymerase II subunit J4, pseudogene, humanhuman

TSL 1 (best) BASIC

Gene POLR2J4, Length 6,466 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J4-202ENST00000427076 LINC00527Q9UJ94 153 aa9.49□□□□□ -0.89
POLR2J4-202ENST00000427076 POLR3KQ9Y2Y1 108 aaPredicted RBP9.49□□□□□ -0.89
POLR2J4-202ENST00000427076 ABCA3Q99758 1704 aa9.49□□□□□ -0.89
POLR2J4-202ENST00000427076 TNRC6CQ9HCJ0 1690 aaKnown RBP9.48□□□□□ -0.89
POLR2J4-202ENST00000427076 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.48□□□□□ -0.89
POLR2J4-202ENST00000427076 BHLHA9Q7RTU4 235 aa9.48□□□□□ -0.89
POLR2J4-202ENST00000427076 FAM57AQ8TBR7 257 aa9.48□□□□□ -0.89
POLR2J4-202ENST00000427076 TRAV9-1A0A075B6T8 112 aa9.48□□□□□ -0.89
POLR2J4-202ENST00000427076 EFEMP2O95967 443 aa9.48□□□□□ -0.89
POLR2J4-202ENST00000427076 RREB1Q92766 1687 aa9.48□□□□□ -0.89
POLR2J4-202ENST00000427076 C5orf67F2Z3F1 127 aa9.48□□□□□ -0.89
POLR2J4-202ENST00000427076 K7EMI3 77 aa9.48□□□□□ -0.89
POLR2J4-202ENST00000427076 APOBEC3AP31941 199 aaPredicted RBP9.48□□□□□ -0.89
POLR2J4-202ENST00000427076 UBE2WQ96B02 151 aa9.48□□□□□ -0.89
POLR2J4-202ENST00000427076 TMEM14DPA8MWL7 114 aa9.48□□□□□ -0.89
POLR2J4-202ENST00000427076 ZNF876PQ49A33 203 aa9.48□□□□□ -0.89
POLR2J4-202ENST00000427076 PSMG4Q5JS54 123 aa9.48□□□□□ -0.89
POLR2J4-202ENST00000427076 TMEM54Q969K7 222 aa9.48□□□□□ -0.89
POLR2J4-202ENST00000427076 CHCHD1Q96BP2 118 aaKnown RBP9.48□□□□□ -0.89
POLR2J4-202ENST00000427076 SNHG12Q9BXW3 62 aa9.48□□□□□ -0.89
POLR2J4-202ENST00000427076 COLCA2A8K830 154 aa9.48□□□□□ -0.89
POLR2J4-202ENST00000427076 B9A039 149 aa9.48□□□□□ -0.89
POLR2J4-202ENST00000427076 FAM90A2PQ658T7 463 aa9.48□□□□□ -0.89
POLR2J4-202ENST00000427076 CD160O95971 181 aa9.47□□□□□ -0.89
POLR2J4-202ENST00000427076 DPM3Q9P2X0 92 aa9.47□□□□□ -0.89
POLR2J4-202ENST00000427076 A0A087WX48 190 aa9.47□□□□□ -0.89
POLR2J4-202ENST00000427076 SCN7AQ01118 1682 aa9.47□□□□□ -0.89
POLR2J4-202ENST00000427076 COX6A1P12074 109 aa9.47□□□□□ -0.89
POLR2J4-202ENST00000427076 LEPROTO15243 131 aa9.47□□□□□ -0.89
POLR2J4-202ENST00000427076 C1QAP02745 245 aa9.47□□□□□ -0.89
POLR2J4-202ENST00000427076 SRSF2Q01130 221 aaKnown RBP9.47□□□□□ -0.89
POLR2J4-202ENST00000427076 COL22A1Q8NFW1 1626 aaPredicted RBP9.47□□□□□ -0.89
POLR2J4-202ENST00000427076 RAMP3O60896 148 aa9.47□□□□□ -0.89
POLR2J4-202ENST00000427076 C3orf79P0CE67 100 aa9.47□□□□□ -0.89
POLR2J4-202ENST00000427076 TMEM144Q7Z5S9 345 aa9.47□□□□□ -0.89
POLR2J4-202ENST00000427076 GNB1LQ9BYB4 327 aa9.46□□□□□ -0.89
POLR2J4-202ENST00000427076 C7orf69Q9H7B7 122 aa9.46□□□□□ -0.89
POLR2J4-202ENST00000427076 TGFBR3LH3BV60 316 aa9.46□□□□□ -0.89
POLR2J4-202ENST00000427076 CTSBP07858 339 aa9.46□□□□□ -0.89
POLR2J4-202ENST00000427076 HAMPP81172 84 aa9.46□□□□□ -0.89
POLR2J4-202ENST00000427076 DEFB121Q5J5C9 76 aa9.46□□□□□ -0.89
POLR2J4-202ENST00000427076 IGFL4Q6B9Z1 124 aa9.46□□□□□ -0.89
POLR2J4-202ENST00000427076 OSR1Q8TAX0 266 aaPredicted RBP9.46□□□□□ -0.89
POLR2J4-202ENST00000427076 SPXQ9BT56 116 aa9.46□□□□□ -0.89
POLR2J4-202ENST00000427076 GREM1O60565 184 aa9.46□□□□□ -0.9
POLR2J4-202ENST00000427076 NDPQ00604 133 aa9.46□□□□□ -0.9
POLR2J4-202ENST00000427076 C6orf226Q5I0X4 101 aa9.46□□□□□ -0.9
POLR2J4-202ENST00000427076 Q8NFD4 153 aa9.46□□□□□ -0.9
POLR2J4-202ENST00000427076 SPATA25Q9BR10 227 aa9.46□□□□□ -0.9
POLR2J4-202ENST00000427076 GAGE7O76087 117 aa9.46□□□□□ -0.9
POLR2J4-202ENST00000427076 GAGE12FP0CL80 117 aa9.46□□□□□ -0.9
POLR2J4-202ENST00000427076 GAGE12GP0CL81 117 aa9.46□□□□□ -0.9
POLR2J4-202ENST00000427076 GAGE12IP0CL82 117 aa9.46□□□□□ -0.9
POLR2J4-202ENST00000427076 FAM27E3Q08E93 113 aa9.46□□□□□ -0.9
POLR2J4-202ENST00000427076 PMVKQ15126 192 aa9.46□□□□□ -0.9
POLR2J4-202ENST00000427076 SPATA31B1PQ5VZV4 182 aa9.46□□□□□ -0.9
POLR2J4-202ENST00000427076 LINC00477Q96M19 166 aa9.46□□□□□ -0.9
POLR2J4-202ENST00000427076 CHAC1Q9BUX1 264 aa9.46□□□□□ -0.9
POLR2J4-202ENST00000427076 PIKFYVEQ9Y2I7 2098 aa9.46□□□□□ -0.9
POLR2J4-202ENST00000427076 A0A087WV48 116 aa9.46□□□□□ -0.9
POLR2J4-202ENST00000427076 TCRBV4S1A1TA0A5B7 111 aa9.46□□□□□ -0.9
POLR2J4-202ENST00000427076 CCL3L1P16619 93 aa9.46□□□□□ -0.9
POLR2J4-202ENST00000427076 NRN1LQ496H8 165 aa9.46□□□□□ -0.9
POLR2J4-202ENST00000427076 RNF125Q96EQ8 232 aa9.46□□□□□ -0.9
POLR2J4-202ENST00000427076 RCHY1Q96PM5 261 aa9.46□□□□□ -0.9
POLR2J4-202ENST00000427076 SAA2-SAA4A0A096LPE2 208 aa9.45□□□□□ -0.9
POLR2J4-202ENST00000427076 IGKV1-8A0A0C4DH67 115 aa9.45□□□□□ -0.9
POLR2J4-202ENST00000427076 SAA2P0DJI9 122 aaPredicted RBP9.45□□□□□ -0.9
POLR2J4-202ENST00000427076 RPL35AP18077 110 aaKnown RBP9.45□□□□□ -0.9
POLR2J4-202ENST00000427076 RPL15P61313 204 aaKnown RBP9.45□□□□□ -0.9
POLR2J4-202ENST00000427076 DAD1P61803 113 aa9.45□□□□□ -0.9
POLR2J4-202ENST00000427076 TEX43Q6ZNM6 134 aa9.45□□□□□ -0.9
POLR2J4-202ENST00000427076 BAALCQ8WXS3 180 aa9.45□□□□□ -0.9
POLR2J4-202ENST00000427076 C1orf159Q96HA4 380 aa9.45□□□□□ -0.9
POLR2J4-202ENST00000427076 SHISA3A0PJX4 238 aa9.45□□□□□ -0.9
POLR2J4-202ENST00000427076 CD5LO43866 347 aa9.45□□□□□ -0.9
POLR2J4-202ENST00000427076 TIMP3P35625 211 aa9.45□□□□□ -0.9
POLR2J4-202ENST00000427076 BSPH1Q075Z2 132 aa9.45□□□□□ -0.9
POLR2J4-202ENST00000427076 CHCHD2P9Q5T1J5 151 aaPredicted RBP9.45□□□□□ -0.9
POLR2J4-202ENST00000427076 PRDM6Q9NQX0 595 aa9.45□□□□□ -0.9
POLR2J4-202ENST00000427076 ZNF319Q9P2F9 582 aa9.45□□□□□ -0.9
POLR2J4-202ENST00000427076 TRAV25A0A0B4J276 109 aa9.45□□□□□ -0.9
POLR2J4-202ENST00000427076 TCTEX1D4Q5JR98 221 aa9.45□□□□□ -0.9
POLR2J4-202ENST00000427076 CDPF1Q6NVV7 123 aa9.45□□□□□ -0.9
POLR2J4-202ENST00000427076 GAGE12HA6NDE8 117 aa9.45□□□□□ -0.9
POLR2J4-202ENST00000427076 DTX2Q86UW9 622 aa9.45□□□□□ -0.9
POLR2J4-202ENST00000427076 KLF2Q9Y5W3 355 aaPredicted RBP9.45□□□□□ -0.9
POLR2J4-202ENST00000427076 TRGV11A0A075B6L2 103 aa9.44□□□□□ -0.9
POLR2J4-202ENST00000427076 TRGV1A0A0A0MS02 117 aa9.44□□□□□ -0.9
POLR2J4-202ENST00000427076 NDUFS5O43920 106 aa9.44□□□□□ -0.9
POLR2J4-202ENST00000427076 EXOC3-AS1Q8N2X6 119 aa9.44□□□□□ -0.9
POLR2J4-202ENST00000427076 CEACAM8P31997 349 aaPredicted RBP9.44□□□□□ -0.9
POLR2J4-202ENST00000427076 SLC25A45Q8N413 288 aa9.44□□□□□ -0.9
POLR2J4-202ENST00000427076 PKIGQ9Y2B9 76 aa9.44□□□□□ -0.9
POLR2J4-202ENST00000427076 ALS2Q96Q42 1657 aa9.44□□□□□ -0.9
POLR2J4-202ENST00000427076 RHOGP84095 191 aa9.44□□□□□ -0.9
POLR2J4-202ENST00000427076 ETDBQ3ZM63 59 aa9.44□□□□□ -0.9
POLR2J4-202ENST00000427076 CD200R1LQ6Q8B3 271 aa9.44□□□□□ -0.9
POLR2J4-202ENST00000427076 LYZL1Q6UWQ5 148 aa9.44□□□□□ -0.9
POLR2J4-202ENST00000427076 C1orf53Q5VUE5 145 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms