RNA–Protein interactions for RNA: ENST00000425443.6

COL12A1-205, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5

Gene COL12A1, Length 3,135 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-205ENST00000425443 KIAA1644Q3SXP7 199 aa10.58□□□□□ -0.72
COL12A1-205ENST00000425443 Q6ZWC4 215 aa10.58□□□□□ -0.72
COL12A1-205ENST00000425443 MIR17HGQ75NE6 70 aa10.58□□□□□ -0.72
COL12A1-205ENST00000425443 DDB2Q92466 427 aa10.58□□□□□ -0.72
COL12A1-205ENST00000425443 PLEKHA3Q9HB20 300 aa10.58□□□□□ -0.72
COL12A1-205ENST00000425443 J3QR06 171 aa10.58□□□□□ -0.72
COL12A1-205ENST00000425443 TCL1AP56279 114 aa10.58□□□□□ -0.72
COL12A1-205ENST00000425443 ZNF90Q03938 601 aa10.58□□□□□ -0.72
COL12A1-205ENST00000425443 TMEM183BQ1AE95 376 aa10.58□□□□□ -0.72
COL12A1-205ENST00000425443 TMEM249Q2WGJ8 235 aa10.58□□□□□ -0.72
COL12A1-205ENST00000425443 TEPPQ6URK8 271 aa10.58□□□□□ -0.72
COL12A1-205ENST00000425443 C17orf100A8MU93 164 aa10.58□□□□□ -0.72
COL12A1-205ENST00000425443 CCKARP32238 428 aa10.58□□□□□ -0.72
COL12A1-205ENST00000425443 CDKN1AP38936 164 aa10.58□□□□□ -0.72
COL12A1-205ENST00000425443 PAX2Q02962 417 aa10.58□□□□□ -0.72
COL12A1-205ENST00000425443 PSG5Q15238 335 aa10.58□□□□□ -0.72
COL12A1-205ENST00000425443 DPRXA6NFQ7 191 aa10.57□□□□□ -0.72
COL12A1-205ENST00000425443 GCHFRP30047 84 aa10.57□□□□□ -0.72
COL12A1-205ENST00000425443 FOXC1Q12948 553 aa10.57□□□□□ -0.72
COL12A1-205ENST00000425443 NUP37Q8NFH4 326 aa10.57□□□□□ -0.72
COL12A1-205ENST00000425443 C20orf144Q9BQM9 153 aa10.57□□□□□ -0.72
COL12A1-205ENST00000425443 DYNLRB1Q9NP97 96 aa10.57□□□□□ -0.72
COL12A1-205ENST00000425443 PRNDQ9UKY0 176 aa10.57□□□□□ -0.72
COL12A1-205ENST00000425443 CACNA1BQ00975 2339 aa10.57□□□□□ -0.72
COL12A1-205ENST00000425443 AKAP6Q13023 2319 aa10.57□□□□□ -0.72
COL12A1-205ENST00000425443 TANC2Q9HCD6 1990 aa10.57□□□□□ -0.72
COL12A1-205ENST00000425443 CXorf1O96002 111 aa10.57□□□□□ -0.72
COL12A1-205ENST00000425443 APELAP0DMC3 54 aa10.57□□□□□ -0.72
COL12A1-205ENST00000425443 TMPRSS3P57727 454 aa10.57□□□□□ -0.72
COL12A1-205ENST00000425443 FXYD3Q14802 87 aa10.57□□□□□ -0.72
COL12A1-205ENST00000425443 ADIPOQQ15848 244 aa10.57□□□□□ -0.72
COL12A1-205ENST00000425443 NHLRC2Q8NBF2 726 aa10.57□□□□□ -0.72
COL12A1-205ENST00000425443 RPUSD1Q9UJJ7 312 aaKnown RBP10.57□□□□□ -0.72
COL12A1-205ENST00000425443 DSCAML1Q8TD84 2053 aa10.56□□□□□ -0.72
COL12A1-205ENST00000425443 TRBV7-9A0A0J9YWB2 115 aa10.56□□□□□ -0.72
COL12A1-205ENST00000425443 YPEL3P61236 119 aaPredicted RBP10.56□□□□□ -0.72
COL12A1-205ENST00000425443 AMMECR1LQ6DCA0 310 aa10.56□□□□□ -0.72
COL12A1-205ENST00000425443 ATOH7Q8N100 152 aa10.56□□□□□ -0.72
COL12A1-205ENST00000425443 OR10G8Q8NGN5 311 aa10.56□□□□□ -0.72
COL12A1-205ENST00000425443 THYN1Q9P016 225 aa10.56□□□□□ -0.72
COL12A1-205ENST00000425443 FOXA2Q9Y261 457 aaPredicted RBP10.56□□□□□ -0.72
COL12A1-205ENST00000425443 TRGV8A0A0C4DH27 118 aa10.56□□□□□ -0.72
COL12A1-205ENST00000425443 APOA2P02652 100 aa10.56□□□□□ -0.72
COL12A1-205ENST00000425443 CCL3L1P16619 93 aa10.56□□□□□ -0.72
COL12A1-205ENST00000425443 ARL3P36405 182 aa10.56□□□□□ -0.72
COL12A1-205ENST00000425443 TMEM14BQ9NUH8 114 aa10.56□□□□□ -0.72
COL12A1-205ENST00000425443 BSNQ9UPA5 3926 aa10.56□□□□□ -0.72
COL12A1-205ENST00000425443 RAI1Q7Z5J4 1906 aaPredicted RBP10.56□□□□□ -0.72
COL12A1-205ENST00000425443 SRRM4A7MD48 611 aaKnown RBP10.56□□□□□ -0.72
COL12A1-205ENST00000425443 SERF1AO75920 110 aa10.56□□□□□ -0.72
COL12A1-205ENST00000425443 CRYBB3P26998 211 aa10.56□□□□□ -0.72
COL12A1-205ENST00000425443 OR10X1Q8NGY0 326 aa10.56□□□□□ -0.72
COL12A1-205ENST00000425443 ZNF586Q9NXT0 402 aa10.56□□□□□ -0.72
COL12A1-205ENST00000425443 LINC00312Q9Y6C7 94 aa10.56□□□□□ -0.72
COL12A1-205ENST00000425443 IGKV1OR2-108A0A075B7D4 117 aa10.55□□□□□ -0.72
COL12A1-205ENST00000425443 CT45A6P0DMU7 189 aa10.55□□□□□ -0.72
COL12A1-205ENST00000425443 CT45A5P0DMU8 189 aa10.55□□□□□ -0.72
COL12A1-205ENST00000425443 CT45A7P0DMV0 189 aa10.55□□□□□ -0.72
COL12A1-205ENST00000425443 ZNF714Q96N38 554 aa10.55□□□□□ -0.72
COL12A1-205ENST00000425443 BET1LQ9NYM9 111 aa10.55□□□□□ -0.72
COL12A1-205ENST00000425443 K7EQM0 130 aa10.55□□□□□ -0.72
COL12A1-205ENST00000425443 NDUFB3O43676 98 aa10.55□□□□□ -0.72
COL12A1-205ENST00000425443 MGST1P10620 155 aaKnown RBP10.55□□□□□ -0.72
COL12A1-205ENST00000425443 GATA3P23771 443 aa10.55□□□□□ -0.72
COL12A1-205ENST00000425443 IER3P46695 156 aa10.55□□□□□ -0.72
COL12A1-205ENST00000425443 RHOBP62745 196 aa10.55□□□□□ -0.72
COL12A1-205ENST00000425443 SLC25A48Q6ZT89 311 aaKnown RBP10.55□□□□□ -0.72
COL12A1-205ENST00000425443 SMIM20Q8N5G0 67 aa10.55□□□□□ -0.72
COL12A1-205ENST00000425443 OR9G1Q8NH87 305 aa10.55□□□□□ -0.72
COL12A1-205ENST00000425443 CMTM2Q8TAZ6 248 aa10.55□□□□□ -0.72
COL12A1-205ENST00000425443 ZNF503Q96F45 646 aa10.55□□□□□ -0.72
COL12A1-205ENST00000425443 COMMD5Q9GZQ3 224 aa10.55□□□□□ -0.72
COL12A1-205ENST00000425443 MRPL18Q9H0U6 180 aaKnown RBP10.55□□□□□ -0.72
COL12A1-205ENST00000425443 SERTAD4Q9NUC0 356 aa10.55□□□□□ -0.72
COL12A1-205ENST00000425443 ATRXP46100 2492 aa10.54□□□□□ -0.72
COL12A1-205ENST00000425443 LINC00869P0C866 280 aa10.54□□□□□ -0.72
COL12A1-205ENST00000425443 TEX36Q5VZQ5 186 aa10.54□□□□□ -0.72
COL12A1-205ENST00000425443 ZNF439Q8NDP4 499 aa10.54□□□□□ -0.72
COL12A1-205ENST00000425443 HARBI1Q96MB7 349 aa10.54□□□□□ -0.72
COL12A1-205ENST00000425443 RNASE7Q9H1E1 156 aaKnown RBP10.54□□□□□ -0.72
COL12A1-205ENST00000425443 ASH1LQ9NR48 2969 aaKnown RBP10.54□□□□□ -0.72
COL12A1-205ENST00000425443 DLX1P56177 255 aa10.54□□□□□ -0.72
COL12A1-205ENST00000425443 KRTDAPP60985 99 aa10.54□□□□□ -0.72
COL12A1-205ENST00000425443 LRRC10Q5BKY1 277 aa10.54□□□□□ -0.72
COL12A1-205ENST00000425443 NGBQ9NPG2 151 aa10.54□□□□□ -0.72
COL12A1-205ENST00000425443 IL36BQ9NZH7 164 aa10.54□□□□□ -0.72
COL12A1-205ENST00000425443 SPTAN1Q13813 2472 aaKnown RBP10.54□□□□□ -0.72
COL12A1-205ENST00000425443 SPTBN1Q01082 2364 aaKnown RBP10.54□□□□□ -0.72
COL12A1-205ENST00000425443 PLAUP00749 431 aa10.53□□□□□ -0.72
COL12A1-205ENST00000425443 LGALS4P56470 323 aa10.53□□□□□ -0.72
COL12A1-205ENST00000425443 RANP62826 216 aaKnown RBP10.53□□□□□ -0.72
COL12A1-205ENST00000425443 C10orf55Q5SWW7 151 aa10.53□□□□□ -0.72
COL12A1-205ENST00000425443 PQLC2Q6ZP29 291 aa10.53□□□□□ -0.72
COL12A1-205ENST00000425443 EAF1Q96JC9 268 aaPredicted RBP10.53□□□□□ -0.72
COL12A1-205ENST00000425443 MRPL20Q9BYC9 149 aaKnown RBP10.53□□□□□ -0.72
COL12A1-205ENST00000425443 V9GYV3 84 aa10.53□□□□□ -0.72
COL12A1-205ENST00000425443 UPK2O00526 184 aa10.53□□□□□ -0.72
COL12A1-205ENST00000425443 SAA1P0DJI8 122 aaPredicted RBP10.53□□□□□ -0.72
COL12A1-205ENST00000425443 SUMO1P63165 101 aaKnown RBP10.53□□□□□ -0.72
COL12A1-205ENST00000425443 PRR20EP86478 221 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms