RNA–Protein interactions for RNA: ENST00000425436.7

SHOX2-202, Transcript of short stature homeobox 2, humanhuman

TSL 5 BASIC

Gene SHOX2, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-202ENST00000425436 MT-CO2P00403 227 aa12.33□□□□□ -0.44
SHOX2-202ENST00000425436 WT1-ASQ06250 92 aa12.33□□□□□ -0.44
SHOX2-202ENST00000425436 TNXAQ16473 311 aa12.33□□□□□ -0.44
SHOX2-202ENST00000425436 PVRIGQ6DKI7 326 aa12.33□□□□□ -0.44
SHOX2-202ENST00000425436 Q6ZSV7 163 aa12.33□□□□□ -0.44
SHOX2-202ENST00000425436 TXNDC17Q9BRA2 123 aa12.33□□□□□ -0.44
SHOX2-202ENST00000425436 SLC25A22Q9H936 323 aa12.33□□□□□ -0.44
SHOX2-202ENST00000425436 CGB1A6NKQ9 187 aa12.32□□□□□ -0.44
SHOX2-202ENST00000425436 AMY1AP04745 511 aa12.32□□□□□ -0.44
SHOX2-202ENST00000425436 FGF8P55075 233 aaPredicted RBP12.32□□□□□ -0.44
SHOX2-202ENST00000425436 RHOBP62745 196 aa12.32□□□□□ -0.44
SHOX2-202ENST00000425436 GAMTQ14353 236 aa12.32□□□□□ -0.44
SHOX2-202ENST00000425436 PLGLAQ15195 96 aa12.32□□□□□ -0.44
SHOX2-202ENST00000425436 RHEBQ15382 184 aa12.32□□□□□ -0.44
SHOX2-202ENST00000425436 MRGPRG-AS1Q2M3A8 158 aa12.32□□□□□ -0.44
SHOX2-202ENST00000425436 SLC16A13Q7RTY0 426 aa12.32□□□□□ -0.44
SHOX2-202ENST00000425436 SLC45A2Q9UMX9 530 aa12.32□□□□□ -0.44
SHOX2-202ENST00000425436 COL6A5A8TX70 2615 aa12.32□□□□□ -0.44
SHOX2-202ENST00000425436 E7EUB6 86 aa12.32□□□□□ -0.44
SHOX2-202ENST00000425436 NBR2O15453 112 aa12.32□□□□□ -0.44
SHOX2-202ENST00000425436 YIF1AO95070 293 aa12.32□□□□□ -0.44
SHOX2-202ENST00000425436 CXorf1O96002 111 aa12.32□□□□□ -0.44
SHOX2-202ENST00000425436 NPBWR1P48145 328 aa12.32□□□□□ -0.44
SHOX2-202ENST00000425436 PRR20EP86478 221 aa12.32□□□□□ -0.44
SHOX2-202ENST00000425436 PRR20CP86479 221 aa12.32□□□□□ -0.44
SHOX2-202ENST00000425436 PRR20DP86480 221 aa12.32□□□□□ -0.44
SHOX2-202ENST00000425436 PRR20BP86481 221 aa12.32□□□□□ -0.44
SHOX2-202ENST00000425436 PRR20AP86496 221 aa12.32□□□□□ -0.44
SHOX2-202ENST00000425436 MIC13Q5XKP0 118 aa12.32□□□□□ -0.44
SHOX2-202ENST00000425436 SSX7Q7RTT5 188 aa12.32□□□□□ -0.44
SHOX2-202ENST00000425436 C16orf82Q7Z2V1 217 aa12.32□□□□□ -0.44
SHOX2-202ENST00000425436 STPG3Q8N7X2 389 aa12.32□□□□□ -0.44
SHOX2-202ENST00000425436 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.32□□□□□ -0.44
SHOX2-202ENST00000425436 OR1L6Q8NGR2 347 aa12.32□□□□□ -0.44
SHOX2-202ENST00000425436 OR1P1Q8NH06 330 aa12.32□□□□□ -0.44
SHOX2-202ENST00000425436 NPFFR1Q9GZQ6 430 aa12.32□□□□□ -0.44
SHOX2-202ENST00000425436 SMCO4Q9NRQ5 59 aa12.32□□□□□ -0.44
SHOX2-202ENST00000425436 MOB4Q9Y3A3 225 aa12.32□□□□□ -0.44
SHOX2-202ENST00000425436 IGLC7A0M8Q6 106 aa12.31□□□□□ -0.44
SHOX2-202ENST00000425436 NDUFA3O95167 84 aa12.31□□□□□ -0.44
SHOX2-202ENST00000425436 RPL15P61313 204 aaKnown RBP12.31□□□□□ -0.44
SHOX2-202ENST00000425436 MMDQ15546 238 aa12.31□□□□□ -0.44
SHOX2-202ENST00000425436 FAM74A3Q4VXF1 159 aa12.31□□□□□ -0.44
SHOX2-202ENST00000425436 C9orf152Q5JTZ5 239 aa12.31□□□□□ -0.44
SHOX2-202ENST00000425436 C5orf56Q8N8D9 126 aa12.31□□□□□ -0.44
SHOX2-202ENST00000425436 Q8N9W7 124 aa12.31□□□□□ -0.44
SHOX2-202ENST00000425436 RNF2Q99496 336 aa12.31□□□□□ -0.44
SHOX2-202ENST00000425436 NIPSNAP3BQ9BS92 247 aa12.31□□□□□ -0.44
SHOX2-202ENST00000425436 TUBA4BQ9H853 241 aa12.31□□□□□ -0.44
SHOX2-202ENST00000425436 TMEM250H0YL14 139 aa12.3□□□□□ -0.44
SHOX2-202ENST00000425436 M0R036 132 aa12.3□□□□□ -0.44
SHOX2-202ENST00000425436 STAG3L2P0CL84 134 aa12.3□□□□□ -0.44
SHOX2-202ENST00000425436 STAG3L3P0CL85 134 aa12.3□□□□□ -0.44
SHOX2-202ENST00000425436 SELENOTP62341 195 aa12.3□□□□□ -0.44
SHOX2-202ENST00000425436 MEF2BQ02080 365 aaPredicted RBP12.3□□□□□ -0.44
SHOX2-202ENST00000425436 FBXL15Q9H469 300 aa12.3□□□□□ -0.44
SHOX2-202ENST00000425436 ZNF702PQ9H963 129 aa12.3□□□□□ -0.44
SHOX2-202ENST00000425436 TPSG1Q9NRR2 321 aa12.3□□□□□ -0.44
SHOX2-202ENST00000425436 TMEM89A2RUT3 159 aa12.29□□□□□ -0.44
SHOX2-202ENST00000425436 B4DEV8 164 aa12.29□□□□□ -0.44
SHOX2-202ENST00000425436 PNRC1Q12796 327 aaPredicted RBP12.29□□□□□ -0.44
SHOX2-202ENST00000425436 C10orf55Q5SWW7 151 aa12.29□□□□□ -0.44
SHOX2-202ENST00000425436 CYB561D1Q8N8Q1 229 aa12.29□□□□□ -0.44
SHOX2-202ENST00000425436 LINC01006Q8NI28 216 aa12.29□□□□□ -0.44
SHOX2-202ENST00000425436 RASL11BQ9BPW5 248 aa12.29□□□□□ -0.44
SHOX2-202ENST00000425436 PRSS22Q9GZN4 317 aa12.29□□□□□ -0.44
SHOX2-202ENST00000425436 TMA7Q9Y2S6 64 aaKnown RBP12.29□□□□□ -0.44
SHOX2-202ENST00000425436 TENM1Q9UKZ4 2725 aa12.29□□□□□ -0.44
SHOX2-202ENST00000425436 M0QZK8 103 aa12.28□□□□□ -0.44
SHOX2-202ENST00000425436 TSPAN4O14817 238 aa12.28□□□□□ -0.44
SHOX2-202ENST00000425436 NDUFA7O95182 113 aa12.28□□□□□ -0.44
SHOX2-202ENST00000425436 CNIH1O95406 144 aa12.28□□□□□ -0.44
SHOX2-202ENST00000425436 LINC00869P0C866 280 aa12.28□□□□□ -0.44
SHOX2-202ENST00000425436 OR10J1P30954 320 aa12.28□□□□□ -0.44
SHOX2-202ENST00000425436 GNB1P62873 340 aa12.28□□□□□ -0.44
SHOX2-202ENST00000425436 TMEM95Q3KNT9 176 aa12.28□□□□□ -0.44
SHOX2-202ENST00000425436 OR4F5Q8NH21 305 aa12.28□□□□□ -0.44
SHOX2-202ENST00000425436 SRSF12Q8WXF0 261 aaKnown RBP12.28□□□□□ -0.44
SHOX2-202ENST00000425436 TVP23CQ96ET8 276 aa12.28□□□□□ -0.44
SHOX2-202ENST00000425436 RPS10P5Q9NQ39 176 aa12.28□□□□□ -0.44
SHOX2-202ENST00000425436 PUS1Q9Y606 427 aaKnown RBP eCLIP12.28□□□□□ -0.44
SHOX2-202ENST00000425436 F11RQ9Y624 299 aaKnown RBP12.28□□□□□ -0.44
SHOX2-202ENST00000425436 PLXNB1O43157 2135 aa12.28□□□□□ -0.44
SHOX2-202ENST00000425436 C7orf77A4D0Y5 90 aa12.27□□□□□ -0.44
SHOX2-202ENST00000425436 FAM74A7A6NL05 159 aa12.27□□□□□ -0.44
SHOX2-202ENST00000425436 LINC01548A6NM66 108 aa12.27□□□□□ -0.44
SHOX2-202ENST00000425436 H3BQ15 152 aa12.27□□□□□ -0.44
SHOX2-202ENST00000425436 PDE6DO43924 150 aa12.27□□□□□ -0.44
SHOX2-202ENST00000425436 CLN5O75503 358 aa12.27□□□□□ -0.44
SHOX2-202ENST00000425436 CRYGCP07315 174 aa12.27□□□□□ -0.44
SHOX2-202ENST00000425436 TAS2R45P59539 299 aa12.27□□□□□ -0.44
SHOX2-202ENST00000425436 AWAT1Q58HT5 328 aa12.27□□□□□ -0.44
SHOX2-202ENST00000425436 CYP2G1PQ6ZSU1 146 aa12.27□□□□□ -0.44
SHOX2-202ENST00000425436 THAP8Q8NA92 274 aa12.27□□□□□ -0.44
SHOX2-202ENST00000425436 GATAD1Q8WUU5 269 aa12.27□□□□□ -0.44
SHOX2-202ENST00000425436 C16orf95Q9H693 158 aa12.27□□□□□ -0.44
SHOX2-202ENST00000425436 PRELID1Q9Y255 219 aa12.27□□□□□ -0.44
SHOX2-202ENST00000425436 TEX22C9J3V5 150 aa12.27□□□□□ -0.45
SHOX2-202ENST00000425436 FCN1O00602 326 aa12.27□□□□□ -0.45
SHOX2-202ENST00000425436 CEBPGP53567 150 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms