RNA–Protein interactions for RNA: ENST00000421462.5

PKP4-204, Transcript of plakophilin 4, humanhuman

TSL 2

Gene PKP4, Length 3,099 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-204ENST00000421462 ATP1A1-AS1Q5TC04 95 aa13.52□□□□□ -0.24
PKP4-204ENST00000421462 NPIPB3Q92617 1050 aa13.52□□□□□ -0.24
PKP4-204ENST00000421462 MBD6Q96DN6 1003 aa13.52□□□□□ -0.24
PKP4-204ENST00000421462 SIT1Q9Y3P8 196 aa13.52□□□□□ -0.24
PKP4-204ENST00000421462 CHEK1O14757 476 aa13.52□□□□□ -0.25
PKP4-204ENST00000421462 C10orf55Q5SWW7 151 aa13.52□□□□□ -0.25
PKP4-204ENST00000421462 C10orf113Q5VZT2 155 aa13.52□□□□□ -0.25
PKP4-204ENST00000421462 TEX45Q8NA69 505 aa13.52□□□□□ -0.25
PKP4-204ENST00000421462 PRR7Q8TB68 274 aa13.52□□□□□ -0.25
PKP4-204ENST00000421462 FAM167A-AS1Q96KT0 104 aa13.52□□□□□ -0.25
PKP4-204ENST00000421462 TPPP3Q9BW30 176 aa13.52□□□□□ -0.25
PKP4-204ENST00000421462 TRGV5A0A0B4J1U4 118 aa13.51□□□□□ -0.25
PKP4-204ENST00000421462 TEX50A0A1B0GTY4 177 aa13.51□□□□□ -0.25
PKP4-204ENST00000421462 SPRY3O43610 288 aa13.51□□□□□ -0.25
PKP4-204ENST00000421462 ZNF329Q86UD4 541 aa13.51□□□□□ -0.25
PKP4-204ENST00000421462 DEFB125Q8N687 156 aa13.51□□□□□ -0.25
PKP4-204ENST00000421462 RBMXL3Q8N7X1 1067 aaKnown RBP13.51□□□□□ -0.25
PKP4-204ENST00000421462 CHRDL1Q9BU40 450 aa13.51□□□□□ -0.25
PKP4-204ENST00000421462 ST20Q9HBF5 79 aa13.51□□□□□ -0.25
PKP4-204ENST00000421462 HBBP68871 147 aa13.51□□□□□ -0.25
PKP4-204ENST00000421462 TMEM177Q53S58 311 aa13.51□□□□□ -0.25
PKP4-204ENST00000421462 FAM120AOSQ5T036 256 aa13.51□□□□□ -0.25
PKP4-204ENST00000421462 C12orf54Q6X4T0 127 aa13.51□□□□□ -0.25
PKP4-204ENST00000421462 DDB2Q92466 427 aa13.51□□□□□ -0.25
PKP4-204ENST00000421462 RAB37Q96AX2 223 aa13.51□□□□□ -0.25
PKP4-204ENST00000421462 HILPDAQ9Y5L2 63 aa13.51□□□□□ -0.25
PKP4-204ENST00000421462 MGST3O14880 152 aa13.5□□□□□ -0.25
PKP4-204ENST00000421462 MOSP00540 346 aa13.5□□□□□ -0.25
PKP4-204ENST00000421462 PPBPP02775 128 aa13.5□□□□□ -0.25
PKP4-204ENST00000421462 MAP1LC3CQ9BXW4 147 aa13.5□□□□□ -0.25
PKP4-204ENST00000421462 C7orf71A4D174 169 aa13.5□□□□□ -0.25
PKP4-204ENST00000421462 K7ERU9 68 aa13.5□□□□□ -0.25
PKP4-204ENST00000421462 KLK10O43240 276 aa13.5□□□□□ -0.25
PKP4-204ENST00000421462 CECR9P0C854 216 aa13.5□□□□□ -0.25
PKP4-204ENST00000421462 ZNF835Q9Y2P0 537 aa13.5□□□□□ -0.25
PKP4-204ENST00000421462 GAGE10A6NGK3 116 aa13.5□□□□□ -0.25
PKP4-204ENST00000421462 E7EUB6 86 aa13.5□□□□□ -0.25
PKP4-204ENST00000421462 KALRNO60229 2985 aa13.5□□□□□ -0.25
PKP4-204ENST00000421462 RHOGP84095 191 aa13.5□□□□□ -0.25
PKP4-204ENST00000421462 KLF5Q13887 457 aaPredicted RBP13.5□□□□□ -0.25
PKP4-204ENST00000421462 PPP1R35Q8TAP8 253 aa13.5□□□□□ -0.25
PKP4-204ENST00000421462 AP1S3Q96PC3 154 aa13.5□□□□□ -0.25
PKP4-204ENST00000421462 CSTL1Q9H114 145 aa13.5□□□□□ -0.25
PKP4-204ENST00000421462 TRAV8-1A0A0A6YYK1 113 aa13.49□□□□□ -0.25
PKP4-204ENST00000421462 FXYD7P58549 80 aa13.49□□□□□ -0.25
PKP4-204ENST00000421462 ARF6P62330 175 aa13.49□□□□□ -0.25
PKP4-204ENST00000421462 OR1B1Q8NGR6 318 aa13.49□□□□□ -0.25
PKP4-204ENST00000421462 DAZAP1Q96EP5 407 aaKnown RBP13.49□□□□□ -0.25
PKP4-204ENST00000421462 TMUB1Q9BVT8 246 aa13.49□□□□□ -0.25
PKP4-204ENST00000421462 PRNDQ9UKY0 176 aa13.49□□□□□ -0.25
PKP4-204ENST00000421462 P01737 135 aa13.49□□□□□ -0.25
PKP4-204ENST00000421462 PRCDQ00LT1 54 aa13.49□□□□□ -0.25
PKP4-204ENST00000421462 CD69Q07108 199 aa13.49□□□□□ -0.25
PKP4-204ENST00000421462 VWA1Q6PCB0 445 aa13.49□□□□□ -0.25
PKP4-204ENST00000421462 LINC00305Q7Z4B0 112 aa13.49□□□□□ -0.25
PKP4-204ENST00000421462 WIPF2Q8TF74 440 aaPredicted RBP13.49□□□□□ -0.25
PKP4-204ENST00000421462 SAA1P0DJI8 122 aaPredicted RBP13.48□□□□□ -0.25
PKP4-204ENST00000421462 GPR183P32249 361 aa13.48□□□□□ -0.25
PKP4-204ENST00000421462 KIR2DS2P43631 304 aa13.48□□□□□ -0.25
PKP4-204ENST00000421462 Q71RC1 249 aaPredicted RBP13.48□□□□□ -0.25
PKP4-204ENST00000421462 GCSAMQ8N6F7 178 aa13.48□□□□□ -0.25
PKP4-204ENST00000421462 GTSF1Q8WW33 167 aa13.48□□□□□ -0.25
PKP4-204ENST00000421462 FLYWCH2Q96CP2 140 aaKnown RBP13.48□□□□□ -0.25
PKP4-204ENST00000421462 KLRC4-KLRK1H3BQV0 150 aa13.48□□□□□ -0.25
PKP4-204ENST00000421462 RNASE2P10153 161 aaKnown RBP13.48□□□□□ -0.25
PKP4-204ENST00000421462 BPIFB3P59826 476 aa13.48□□□□□ -0.25
PKP4-204ENST00000421462 PMS2CLQ68D20 193 aa13.48□□□□□ -0.25
PKP4-204ENST00000421462 PDPNQ86YL7 162 aa13.48□□□□□ -0.25
PKP4-204ENST00000421462 SPENQ96T58 3664 aaKnown RBP13.48□□□□□ -0.25
PKP4-204ENST00000421462 FAM231BA6NCW3 169 aa13.48□□□□□ -0.25
PKP4-204ENST00000421462 UPK2O00526 184 aa13.48□□□□□ -0.25
PKP4-204ENST00000421462 PATE2Q6UY27 113 aa13.48□□□□□ -0.25
PKP4-204ENST00000421462 DMXL2Q8TDJ6 3036 aa13.47□□□□□ -0.25
PKP4-204ENST00000421462 PEAR1Q5VY43 1037 aaPredicted RBP13.47□□□□□ -0.25
PKP4-204ENST00000421462 PCNX1Q96RV3 2341 aa13.47□□□□□ -0.25
PKP4-204ENST00000421462 OR2J3O76001 311 aa13.47□□□□□ -0.25
PKP4-204ENST00000421462 HTR1DP28221 377 aa13.47□□□□□ -0.25
PKP4-204ENST00000421462 C17orf58Q2M2W7 97 aa13.47□□□□□ -0.25
PKP4-204ENST00000421462 BPIFA4PQ86YQ2 179 aa13.47□□□□□ -0.25
PKP4-204ENST00000421462 OR8A1Q8NGG7 326 aa13.47□□□□□ -0.25
PKP4-204ENST00000421462 MRPL36Q9P0J6 103 aaKnown RBP13.47□□□□□ -0.25
PKP4-204ENST00000421462 GOSR1O95249 250 aa13.46□□□□□ -0.25
PKP4-204ENST00000421462 RTL8BQ17RB0 113 aa13.46□□□□□ -0.25
PKP4-204ENST00000421462 RPP21Q9H633 154 aaKnown RBP13.46□□□□□ -0.25
PKP4-204ENST00000421462 LOC389332A0A1B0GUA5 103 aa13.46□□□□□ -0.25
PKP4-204ENST00000421462 H3BUT2 72 aa13.46□□□□□ -0.25
PKP4-204ENST00000421462 RASL11AQ6T310 242 aa13.46□□□□□ -0.25
PKP4-204ENST00000421462 HARBI1Q96MB7 349 aa13.46□□□□□ -0.25
PKP4-204ENST00000421462 SCRT2Q9NQ03 307 aa13.46□□□□□ -0.25
PKP4-204ENST00000421462 TM4SF20Q53R12 229 aa13.45□□□□□ -0.26
PKP4-204ENST00000421462 INO80CQ6PI98 192 aaPredicted RBP13.45□□□□□ -0.26
PKP4-204ENST00000421462 BHLHA15Q7RTS1 189 aaPredicted RBP13.45□□□□□ -0.26
PKP4-204ENST00000421462 PEF1Q9UBV8 284 aaKnown RBP13.45□□□□□ -0.26
PKP4-204ENST00000421462 EPDR1Q9UM22 224 aa13.45□□□□□ -0.26
PKP4-204ENST00000421462 GVINP1Q7Z2Y8 2422 aa13.45□□□□□ -0.26
PKP4-204ENST00000421462 ERHP84090 104 aaKnown RBP13.45□□□□□ -0.26
PKP4-204ENST00000421462 HCP5Q6MZN7 132 aa13.45□□□□□ -0.26
PKP4-204ENST00000421462 CIARTQ8N365 385 aaPredicted RBP13.45□□□□□ -0.26
PKP4-204ENST00000421462 CCL13Q99616 98 aa13.45□□□□□ -0.26
PKP4-204ENST00000421462 A8MWL6 223 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms