RNA–Protein interactions for RNA: ENST00000420692.6

CTSB-203, Transcript of cathepsin B, humanhuman

TSL 2

Gene CTSB, Length 2,230 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-203ENST00000420692 TRAPPC1Q9Y5R8 145 aa12.92□□□□□ -0.34
CTSB-203ENST00000420692 A0A1B0GUS0 222 aa12.91□□□□□ -0.34
CTSB-203ENST00000420692 UBE2L3P68036 154 aaKnown RBP12.91□□□□□ -0.34
CTSB-203ENST00000420692 PPP1R27Q86WC6 154 aa12.91□□□□□ -0.34
CTSB-203ENST00000420692 FXYD5Q96DB9 178 aa12.91□□□□□ -0.34
CTSB-203ENST00000420692 RNF2Q99496 336 aa12.91□□□□□ -0.34
CTSB-203ENST00000420692 SNRPCP09234 159 aaKnown RBP12.9□□□□□ -0.34
CTSB-203ENST00000420692 YPEL3P61236 119 aaPredicted RBP12.9□□□□□ -0.34
CTSB-203ENST00000420692 RD3LP0DJH9 198 aa12.9□□□□□ -0.34
CTSB-203ENST00000420692 SELENOTP62341 195 aa12.9□□□□□ -0.34
CTSB-203ENST00000420692 OR8B3Q8NGG8 313 aa12.9□□□□□ -0.34
CTSB-203ENST00000420692 OR8B2Q96RD0 313 aa12.9□□□□□ -0.34
CTSB-203ENST00000420692 RNASE7Q9H1E1 156 aaKnown RBP12.9□□□□□ -0.34
CTSB-203ENST00000420692 GSX1Q9H4S2 264 aaPredicted RBP12.9□□□□□ -0.34
CTSB-203ENST00000420692 TNFRSF19Q9NS68 423 aa12.9□□□□□ -0.34
CTSB-203ENST00000420692 ONECUT1Q9UBC0 465 aa12.9□□□□□ -0.34
CTSB-203ENST00000420692 GCGP01275 180 aa12.89□□□□□ -0.35
CTSB-203ENST00000420692 HIST1H1BP16401 226 aaKnown RBP12.89□□□□□ -0.35
CTSB-203ENST00000420692 CNN1P51911 297 aaKnown RBP12.89□□□□□ -0.35
CTSB-203ENST00000420692 ERVFC1-1P60608 527 aa12.89□□□□□ -0.35
CTSB-203ENST00000420692 FBLN7Q53RD9 439 aa12.89□□□□□ -0.35
CTSB-203ENST00000420692 TMEM116Q8NCL8 245 aa12.89□□□□□ -0.35
CTSB-203ENST00000420692 OR1L4Q8NGR5 311 aa12.89□□□□□ -0.35
CTSB-203ENST00000420692 RPEQ96AT9 228 aa12.89□□□□□ -0.35
CTSB-203ENST00000420692 PFDN5Q99471 154 aa12.89□□□□□ -0.35
CTSB-203ENST00000420692 PAXXQ9BUH6 204 aa12.89□□□□□ -0.35
CTSB-203ENST00000420692 MED13LQ71F56 2210 aa12.89□□□□□ -0.35
CTSB-203ENST00000420692 CBLN1P23435 193 aa12.89□□□□□ -0.35
CTSB-203ENST00000420692 ADMP35318 185 aa12.89□□□□□ -0.35
CTSB-203ENST00000420692 ARF6P62330 175 aa12.89□□□□□ -0.35
CTSB-203ENST00000420692 ASPHD1Q5U4P2 390 aa12.89□□□□□ -0.35
CTSB-203ENST00000420692 LINC00305Q7Z4B0 112 aa12.89□□□□□ -0.35
CTSB-203ENST00000420692 A0A1W2PPR1 153 aa12.88□□□□□ -0.35
CTSB-203ENST00000420692 NUPR1O60356 82 aa12.88□□□□□ -0.35
CTSB-203ENST00000420692 LIPFP07098 398 aa12.88□□□□□ -0.35
CTSB-203ENST00000420692 ZNF329Q86UD4 541 aa12.88□□□□□ -0.35
CTSB-203ENST00000420692 BTF3L4Q96K17 158 aa12.88□□□□□ -0.35
CTSB-203ENST00000420692 TRGV9Q99603 122 aa12.88□□□□□ -0.35
CTSB-203ENST00000420692 RAB1BQ9H0U4 201 aa12.88□□□□□ -0.35
CTSB-203ENST00000420692 CBLN4Q9NTU7 201 aa12.88□□□□□ -0.35
CTSB-203ENST00000420692 F11RQ9Y624 299 aaKnown RBP12.88□□□□□ -0.35
CTSB-203ENST00000420692 TIMM23O14925 209 aa12.88□□□□□ -0.35
CTSB-203ENST00000420692 ORM2P19652 201 aa12.88□□□□□ -0.35
CTSB-203ENST00000420692 MYCNOSP40205 109 aa12.88□□□□□ -0.35
CTSB-203ENST00000420692 TMEM256Q8N2U0 113 aa12.88□□□□□ -0.35
CTSB-203ENST00000420692 PAX2Q02962 417 aa12.87□□□□□ -0.35
CTSB-203ENST00000420692 FXYD3Q14802 87 aa12.87□□□□□ -0.35
CTSB-203ENST00000420692 TPTE2P1Q5T6R2 138 aa12.87□□□□□ -0.35
CTSB-203ENST00000420692 SRSF12Q8WXF0 261 aaKnown RBP12.87□□□□□ -0.35
CTSB-203ENST00000420692 TRAV9-1A0A075B6T8 112 aa12.86□□□□□ -0.35
CTSB-203ENST00000420692 GZMBP10144 247 aa12.86□□□□□ -0.35
CTSB-203ENST00000420692 BPIFB3P59826 476 aa12.86□□□□□ -0.35
CTSB-203ENST00000420692 KLRD1Q13241 179 aa12.86□□□□□ -0.35
CTSB-203ENST00000420692 JOSD1Q15040 202 aaPredicted RBP12.86□□□□□ -0.35
CTSB-203ENST00000420692 DNLZQ5SXM8 178 aa12.86□□□□□ -0.35
CTSB-203ENST00000420692 ETFRF1Q6IPR1 90 aa12.86□□□□□ -0.35
CTSB-203ENST00000420692 OR8I2Q8N0Y5 310 aa12.86□□□□□ -0.35
CTSB-203ENST00000420692 NHLRC2Q8NBF2 726 aa12.86□□□□□ -0.35
CTSB-203ENST00000420692 OR11H6Q8NGC7 330 aa12.86□□□□□ -0.35
CTSB-203ENST00000420692 CFHR4Q92496 578 aa12.86□□□□□ -0.35
CTSB-203ENST00000420692 OSTCQ9NRP0 149 aa12.86□□□□□ -0.35
CTSB-203ENST00000420692 TP53TG3Q9ULZ0 132 aa12.86□□□□□ -0.35
CTSB-203ENST00000420692 AMMECR1Q9Y4X0 333 aaPredicted RBP12.86□□□□□ -0.35
CTSB-203ENST00000420692 RPEL1Q2QD12 228 aa12.86□□□□□ -0.35
CTSB-203ENST00000420692 TIGITQ495A1 244 aa12.86□□□□□ -0.35
CTSB-203ENST00000420692 OR1B1Q8NGR6 318 aa12.86□□□□□ -0.35
CTSB-203ENST00000420692 CDC42EP3Q9UKI2 254 aa12.86□□□□□ -0.35
CTSB-203ENST00000420692 TRAV34A0A0B4J273 112 aa12.85□□□□□ -0.35
CTSB-203ENST00000420692 ISLRO14498 428 aa12.85□□□□□ -0.35
CTSB-203ENST00000420692 GBGT1Q8N5D6 347 aa12.85□□□□□ -0.35
CTSB-203ENST00000420692 WNK2Q9Y3S1 2297 aa12.85□□□□□ -0.35
CTSB-203ENST00000420692 I3L2K1 104 aa12.85□□□□□ -0.35
CTSB-203ENST00000420692 CD24P25063 80 aa12.85□□□□□ -0.35
CTSB-203ENST00000420692 OR1L6Q8NGR2 347 aa12.85□□□□□ -0.35
CTSB-203ENST00000420692 FAM168AQ92567 244 aa12.85□□□□□ -0.35
CTSB-203ENST00000420692 RNF5Q99942 180 aa12.85□□□□□ -0.35
CTSB-203ENST00000420692 HILPDAQ9Y5L2 63 aa12.85□□□□□ -0.35
CTSB-203ENST00000420692 TRAV20A0A0B4J274 112 aa12.84□□□□□ -0.35
CTSB-203ENST00000420692 LINC00310P59036 64 aa12.84□□□□□ -0.35
CTSB-203ENST00000420692 GNG5P63218 68 aa12.84□□□□□ -0.35
CTSB-203ENST00000420692 C9orf152Q5JTZ5 239 aa12.84□□□□□ -0.35
CTSB-203ENST00000420692 MRPL41Q8IXM3 137 aaKnown RBP12.84□□□□□ -0.35
CTSB-203ENST00000420692 GRIFINA4D1Z8 144 aa12.84□□□□□ -0.35
CTSB-203ENST00000420692 ODF3BA8MYP8 253 aa12.84□□□□□ -0.35
CTSB-203ENST00000420692 PEX7O00628 323 aa12.84□□□□□ -0.35
CTSB-203ENST00000420692 MGST1P10620 155 aaKnown RBP12.84□□□□□ -0.35
CTSB-203ENST00000420692 HTR1DP28221 377 aa12.84□□□□□ -0.35
CTSB-203ENST00000420692 IER3P46695 156 aa12.84□□□□□ -0.35
CTSB-203ENST00000420692 TAS2R60P59551 318 aa12.84□□□□□ -0.35
CTSB-203ENST00000420692 RANP62826 216 aaKnown RBP12.84□□□□□ -0.35
CTSB-203ENST00000420692 LEMD1Q68G75 181 aa12.84□□□□□ -0.35
CTSB-203ENST00000420692 PERPQ96FX8 193 aa12.84□□□□□ -0.35
CTSB-203ENST00000420692 MRPL18Q9H0U6 180 aaKnown RBP12.84□□□□□ -0.35
CTSB-203ENST00000420692 DPM3Q9P2X0 92 aa12.84□□□□□ -0.35
CTSB-203ENST00000420692 IGLC1P0CG04 106 aa12.83□□□□□ -0.36
CTSB-203ENST00000420692 PLP1P60201 277 aa12.83□□□□□ -0.36
CTSB-203ENST00000420692 LY6DQ14210 128 aa12.83□□□□□ -0.36
CTSB-203ENST00000420692 WNT10AQ9GZT5 417 aa12.83□□□□□ -0.36
CTSB-203ENST00000420692 AKAP6Q13023 2319 aa12.83□□□□□ -0.36
CTSB-203ENST00000420692 LOC105371242A0A075B767 164 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms