RNA–Protein interactions for RNA: ENST00000419378.5

HMGN1-205, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 850 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-205ENST00000419378 FOLR2P14207 255 aa5.21□□□□□ -1.58
HMGN1-205ENST00000419378 S100A5P33763 92 aa5.21□□□□□ -1.58
HMGN1-205ENST00000419378 DHODHQ02127 395 aa5.21□□□□□ -1.58
HMGN1-205ENST00000419378 FAM106AQ4KMX7 169 aa5.21□□□□□ -1.58
HMGN1-205ENST00000419378 PXDC1Q5TGL8 231 aa5.21□□□□□ -1.58
HMGN1-205ENST00000419378 CFAP161Q6P656 301 aa5.21□□□□□ -1.58
HMGN1-205ENST00000419378 PLET1Q6UQ28 207 aa5.21□□□□□ -1.58
HMGN1-205ENST00000419378 UNQ9165/PRO28630Q6UXU0 137 aa5.21□□□□□ -1.58
HMGN1-205ENST00000419378 CCDC190Q86UF4 302 aa5.21□□□□□ -1.58
HMGN1-205ENST00000419378 GTSCR1Q86UQ5 136 aa5.21□□□□□ -1.58
HMGN1-205ENST00000419378 NOXA1Q86UR1 476 aa5.21□□□□□ -1.58
HMGN1-205ENST00000419378 SLC35G3Q8N808 338 aa5.21□□□□□ -1.58
HMGN1-205ENST00000419378 TMEM116Q8NCL8 245 aa5.21□□□□□ -1.58
HMGN1-205ENST00000419378 OR2K2Q8NGT1 345 aa5.21□□□□□ -1.58
HMGN1-205ENST00000419378 RNASE11Q8TAA1 199 aaKnown RBP5.21□□□□□ -1.58
HMGN1-205ENST00000419378 DYNLRB2Q8TF09 96 aa5.21□□□□□ -1.58
HMGN1-205ENST00000419378 GLYATL2Q8WU03 294 aa5.21□□□□□ -1.58
HMGN1-205ENST00000419378 RPL36ALQ969Q0 106 aaKnown RBP5.21□□□□□ -1.58
HMGN1-205ENST00000419378 TMEM230Q96A57 120 aa5.21□□□□□ -1.58
HMGN1-205ENST00000419378 TMEM18Q96B42 140 aa5.21□□□□□ -1.58
HMGN1-205ENST00000419378 RRNAD1Q96FB5 475 aaKnown RBP5.21□□□□□ -1.58
HMGN1-205ENST00000419378 BSCL2Q96G97 398 aaPredicted RBP5.21□□□□□ -1.58
HMGN1-205ENST00000419378 ATP6V0BQ99437 205 aa5.21□□□□□ -1.58
HMGN1-205ENST00000419378 ASCL2Q99929 193 aa5.21□□□□□ -1.58
HMGN1-205ENST00000419378 PDCD10Q9BUL8 212 aa5.21□□□□□ -1.58
HMGN1-205ENST00000419378 C21orf62Q9NYP8 219 aa5.21□□□□□ -1.58
HMGN1-205ENST00000419378 SCP2D1Q9UJQ7 156 aa5.21□□□□□ -1.58
HMGN1-205ENST00000419378 USP17L23D6RBM5 183 aa5.2□□□□□ -1.58
HMGN1-205ENST00000419378 INS-IGF2F8WCM5 200 aa5.2□□□□□ -1.58
HMGN1-205ENST00000419378 I3L2K1 104 aa5.2□□□□□ -1.58
HMGN1-205ENST00000419378 MT-CO2P00403 227 aa5.2□□□□□ -1.58
HMGN1-205ENST00000419378 IFNA17P01571 189 aa5.2□□□□□ -1.58
HMGN1-205ENST00000419378 CBLN1P23435 193 aa5.2□□□□□ -1.58
HMGN1-205ENST00000419378 FAUP35544 74 aaKnown RBP5.2□□□□□ -1.58
HMGN1-205ENST00000419378 HOXA1P49639 335 aaPredicted RBP5.2□□□□□ -1.58
HMGN1-205ENST00000419378 AP3S2P59780 193 aa5.2□□□□□ -1.58
HMGN1-205ENST00000419378 ERHP84090 104 aaKnown RBP5.2□□□□□ -1.58
HMGN1-205ENST00000419378 DEFB114Q30KQ6 69 aa5.2□□□□□ -1.58
HMGN1-205ENST00000419378 AARDQ4LEZ3 155 aa5.2□□□□□ -1.58
HMGN1-205ENST00000419378 Q56UQ5 140 aa5.2□□□□□ -1.58
HMGN1-205ENST00000419378 BTNL8Q6UX41 500 aa5.2□□□□□ -1.58
HMGN1-205ENST00000419378 FAM219AQ8IW50 185 aa5.2□□□□□ -1.58
HMGN1-205ENST00000419378 SGPP2Q8IWX5 399 aa5.2□□□□□ -1.58
HMGN1-205ENST00000419378 SELENOHQ8IZQ5 122 aaKnown RBP5.2□□□□□ -1.58
HMGN1-205ENST00000419378 TMEM61Q8N0U2 210 aa5.2□□□□□ -1.58
HMGN1-205ENST00000419378 TOMM5Q8N4H5 51 aa5.2□□□□□ -1.58
HMGN1-205ENST00000419378 UBAC2Q8NBM4 344 aa5.2□□□□□ -1.58
HMGN1-205ENST00000419378 TMEM190Q8WZ59 177 aa5.2□□□□□ -1.58
HMGN1-205ENST00000419378 RBPMSQ93062 196 aaKnown RBP5.2□□□□□ -1.58
HMGN1-205ENST00000419378 GALNT14Q96FL9 552 aa5.2□□□□□ -1.58
HMGN1-205ENST00000419378 SCGB3A2Q96PL1 93 aa5.2□□□□□ -1.58
HMGN1-205ENST00000419378 CHRDL1Q9BU40 450 aa5.2□□□□□ -1.58
HMGN1-205ENST00000419378 ZNF436Q9C0F3 470 aaPredicted RBP5.2□□□□□ -1.58
HMGN1-205ENST00000419378 SRRQ9GZT4 340 aa5.2□□□□□ -1.58
HMGN1-205ENST00000419378 PALMDQ9NP74 551 aa5.2□□□□□ -1.58
HMGN1-205ENST00000419378 TECRQ9NZ01 308 aaKnown RBP5.2□□□□□ -1.58
HMGN1-205ENST00000419378 UFC1Q9Y3C8 167 aa5.2□□□□□ -1.58
HMGN1-205ENST00000419378 SELENOKQ9Y6D0 94 aa5.2□□□□□ -1.58
HMGN1-205ENST00000419378 TMEM56-RWDD3S4R434 201 aa5.2□□□□□ -1.58
HMGN1-205ENST00000419378 DNAH7Q8WXX0 4024 aa5.2□□□□□ -1.58
HMGN1-205ENST00000419378 GAGE12JA6NER3 117 aa5.19□□□□□ -1.58
HMGN1-205ENST00000419378 A8MZ25 164 aa5.19□□□□□ -1.58
HMGN1-205ENST00000419378 NDUFA4O00483 81 aa5.19□□□□□ -1.58
HMGN1-205ENST00000419378 PAGE4O60829 102 aa5.19□□□□□ -1.58
HMGN1-205ENST00000419378 IGHV3-48P01763 117 aa5.19□□□□□ -1.58
HMGN1-205ENST00000419378 RNASE2P10153 161 aaKnown RBP5.19□□□□□ -1.58
HMGN1-205ENST00000419378 AKR1C4P17516 323 aa5.19□□□□□ -1.58
HMGN1-205ENST00000419378 FCGR2BP31994 310 aaPredicted RBP5.19□□□□□ -1.58
HMGN1-205ENST00000419378 SNCAP37840 140 aa5.19□□□□□ -1.58
HMGN1-205ENST00000419378 ETV6P41212 452 aa5.19□□□□□ -1.58
HMGN1-205ENST00000419378 CD81P60033 236 aa5.19□□□□□ -1.58
HMGN1-205ENST00000419378 SUPT4H1P63272 117 aaKnown RBP5.19□□□□□ -1.58
HMGN1-205ENST00000419378 TMEM187Q14656 261 aa5.19□□□□□ -1.58
HMGN1-205ENST00000419378 ODF3L2Q3SX64 289 aa5.19□□□□□ -1.58
HMGN1-205ENST00000419378 SPANXN2Q5MJ10 180 aa5.19□□□□□ -1.58
HMGN1-205ENST00000419378 ZNF57Q68EA5 555 aaPredicted RBP5.19□□□□□ -1.58
HMGN1-205ENST00000419378 PVRIGQ6DKI7 326 aa5.19□□□□□ -1.58
HMGN1-205ENST00000419378 SPSB3Q6PJ21 355 aa5.19□□□□□ -1.58
HMGN1-205ENST00000419378 TMED4Q7Z7H5 227 aa5.19□□□□□ -1.58
HMGN1-205ENST00000419378 SBSPONQ8IVN8 264 aa5.19□□□□□ -1.58
HMGN1-205ENST00000419378 UXS1Q8NBZ7 420 aa5.19□□□□□ -1.58
HMGN1-205ENST00000419378 DEDD2Q8WXF8 326 aa5.19□□□□□ -1.58
HMGN1-205ENST00000419378 IL22RA2Q969J5 263 aa5.19□□□□□ -1.58
HMGN1-205ENST00000419378 MARC2Q969Z3 335 aa5.19□□□□□ -1.58
HMGN1-205ENST00000419378 PINX1Q96BK5 328 aaKnown RBP5.19□□□□□ -1.58
HMGN1-205ENST00000419378 GPR146Q96CH1 333 aa5.19□□□□□ -1.58
HMGN1-205ENST00000419378 ZNF414Q96IQ9 312 aa5.19□□□□□ -1.58
HMGN1-205ENST00000419378 ENY2Q9NPA8 101 aa5.19□□□□□ -1.58
HMGN1-205ENST00000419378 CTNNBIP1Q9NSA3 81 aaPredicted RBP5.19□□□□□ -1.58
HMGN1-205ENST00000419378 CACNG5Q9UF02 275 aa5.19□□□□□ -1.58
HMGN1-205ENST00000419378 MLXQ9UH92 298 aa5.19□□□□□ -1.58
HMGN1-205ENST00000419378 U3KQK5 164 aa5.19□□□□□ -1.58
HMGN1-205ENST00000419378 IGLV5-39A0A0G2JS06 123 aa5.18□□□□□ -1.58
HMGN1-205ENST00000419378 CORTO00230 105 aa5.18□□□□□ -1.58
HMGN1-205ENST00000419378 NUPL2O15504 423 aaKnown RBP5.18□□□□□ -1.58
HMGN1-205ENST00000419378 CTSGP08311 255 aa5.18□□□□□ -1.58
HMGN1-205ENST00000419378 C8orf88P0DMB2 117 aa5.18□□□□□ -1.58
HMGN1-205ENST00000419378 ANXA3P12429 323 aa5.18□□□□□ -1.58
HMGN1-205ENST00000419378 MFAP4P55083 255 aa5.18□□□□□ -1.58
HMGN1-205ENST00000419378 SPCS3P61009 180 aa5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms