RNA–Protein interactions for RNA: ENST00000418882.2

HMGB1P49-201, Transcript of high mobility group box 1 pseudogene 49, humanhuman

BASIC

Gene HMGB1P49, Length 569 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P49-201ENST00000418882 ABCC5O15440 1437 aa1.58□□□□□ -2.16
HMGB1P49-201ENST00000418882 DAPK1P53355 1430 aa1.58□□□□□ -2.16
HMGB1P49-201ENST00000418882 MYOM1P52179 1685 aa1.58□□□□□ -2.16
HMGB1P49-201ENST00000418882 POLA1P09884 1462 aaPredicted RBP1.58□□□□□ -2.16
HMGB1P49-201ENST00000418882 TRPM3Q9HCF6 1732 aaPredicted RBP1.58□□□□□ -2.16
HMGB1P49-201ENST00000418882 SCN10AQ9Y5Y9 1956 aa1.58□□□□□ -2.16
HMGB1P49-201ENST00000418882 KIAA0586Q9BVV6 1533 aa1.58□□□□□ -2.16
HMGB1P49-201ENST00000418882 A0A1W2PQD3 144 aa1.58□□□□□ -2.16
HMGB1P49-201ENST00000418882 RIIAD1A6NNX1 92 aa1.58□□□□□ -2.16
HMGB1P49-201ENST00000418882 H3BT86 120 aa1.58□□□□□ -2.16
HMGB1P49-201ENST00000418882 KPNA4O00629 521 aaPredicted RBP1.58□□□□□ -2.16
HMGB1P49-201ENST00000418882 BANF1O75531 89 aa1.58□□□□□ -2.16
HMGB1P49-201ENST00000418882 GZMBP10144 247 aa1.58□□□□□ -2.16
HMGB1P49-201ENST00000418882 SCGB1A1P11684 91 aa1.58□□□□□ -2.16
HMGB1P49-201ENST00000418882 CCR2P41597 374 aa1.58□□□□□ -2.16
HMGB1P49-201ENST00000418882 LPAR6P43657 344 aa1.58□□□□□ -2.16
HMGB1P49-201ENST00000418882 MIAQ16674 131 aa1.58□□□□□ -2.16
HMGB1P49-201ENST00000418882 KRTAP13-4Q3LI77 160 aa1.58□□□□□ -2.16
HMGB1P49-201ENST00000418882 LINC01554Q52M75 96 aa1.58□□□□□ -2.16
HMGB1P49-201ENST00000418882 CHCHD2P9Q5T1J5 151 aaPredicted RBP1.58□□□□□ -2.16
HMGB1P49-201ENST00000418882 RPL22L1Q6P5R6 122 aaKnown RBP1.58□□□□□ -2.16
HMGB1P49-201ENST00000418882 HRCT1Q6UXD1 115 aa1.58□□□□□ -2.16
HMGB1P49-201ENST00000418882 TCF24Q7RTU0 167 aa1.58□□□□□ -2.16
HMGB1P49-201ENST00000418882 DHFR2Q86XF0 187 aa1.58□□□□□ -2.16
HMGB1P49-201ENST00000418882 BPIFA4PQ86YQ2 179 aa1.58□□□□□ -2.16
HMGB1P49-201ENST00000418882 RPP25LQ8N5L8 163 aaKnown RBP1.58□□□□□ -2.16
HMGB1P49-201ENST00000418882 FGF13Q92913 245 aa1.58□□□□□ -2.16
HMGB1P49-201ENST00000418882 C2orf50Q96LR7 162 aa1.58□□□□□ -2.16
HMGB1P49-201ENST00000418882 IMMP2LQ96T52 175 aa1.58□□□□□ -2.16
HMGB1P49-201ENST00000418882 AICDAQ9GZX7 198 aa1.58□□□□□ -2.16
HMGB1P49-201ENST00000418882 PBOV1Q9GZY1 135 aa1.58□□□□□ -2.16
HMGB1P49-201ENST00000418882 FAM107BQ9H098 131 aa1.58□□□□□ -2.16
HMGB1P49-201ENST00000418882 JPT1Q9UK76 154 aa1.58□□□□□ -2.16
HMGB1P49-201ENST00000418882 ERGIC3Q9Y282 383 aa1.58□□□□□ -2.16
HMGB1P49-201ENST00000418882 IQGAP2Q13576 1575 aa1.58□□□□□ -2.16
HMGB1P49-201ENST00000418882 LAMC3Q9Y6N6 1575 aa1.58□□□□□ -2.16
HMGB1P49-201ENST00000418882 CACNA1GO43497 2377 aa1.58□□□□□ -2.16
HMGB1P49-201ENST00000418882 CLTCL1P53675 1640 aa1.58□□□□□ -2.16
HMGB1P49-201ENST00000418882 EIF2AK4Q9P2K8 1649 aaKnown RBP1.58□□□□□ -2.16
HMGB1P49-201ENST00000418882 DICER1Q9UPY3 1922 aaKnown RBP1.58□□□□□ -2.16
HMGB1P49-201ENST00000418882 SHPRHQ149N8 1683 aa1.58□□□□□ -2.16
HMGB1P49-201ENST00000418882 PPRC1Q5VV67 1664 aaKnown RBP1.58□□□□□ -2.16
HMGB1P49-201ENST00000418882 YTHDC2Q9H6S0 1430 aaKnown RBP1.57□□□□□ -2.16
HMGB1P49-201ENST00000418882 CEP152O94986 1710 aa1.57□□□□□ -2.16
HMGB1P49-201ENST00000418882 UHRF1BP1LA0JNW5 1464 aa1.57□□□□□ -2.16
HMGB1P49-201ENST00000418882 NKTRP30414 1462 aaKnown RBP1.57□□□□□ -2.16
HMGB1P49-201ENST00000418882 GRIN2AQ12879 1464 aa1.57□□□□□ -2.16
HMGB1P49-201ENST00000418882 SHANK2Q9UPX8 1470 aa1.57□□□□□ -2.16
HMGB1P49-201ENST00000418882 WDR7Q9Y4E6 1490 aa1.57□□□□□ -2.16
HMGB1P49-201ENST00000418882 TOPBP1Q92547 1522 aa1.57□□□□□ -2.16
HMGB1P49-201ENST00000418882 TRAV38-1A0A0B4J264 116 aa1.57□□□□□ -2.16
HMGB1P49-201ENST00000418882 FABP5P3A8MUU1 101 aa1.57□□□□□ -2.16
HMGB1P49-201ENST00000418882 C1orf196B1AJZ1 125 aa1.57□□□□□ -2.16
HMGB1P49-201ENST00000418882 J3QRK9 145 aa1.57□□□□□ -2.16
HMGB1P49-201ENST00000418882 TAX1BP3O14907 124 aa1.57□□□□□ -2.16
HMGB1P49-201ENST00000418882 PGLYRP1O75594 196 aaPredicted RBP1.57□□□□□ -2.16
HMGB1P49-201ENST00000418882 NPYP01303 97 aa1.57□□□□□ -2.16
HMGB1P49-201ENST00000418882 IFNA7P01567 189 aa1.57□□□□□ -2.16
HMGB1P49-201ENST00000418882 IGHV3-7P01780 117 aa1.57□□□□□ -2.16
HMGB1P49-201ENST00000418882 CSRP1P21291 193 aaKnown RBP1.57□□□□□ -2.16
HMGB1P49-201ENST00000418882 RNASE4P34096 147 aaKnown RBP1.57□□□□□ -2.16
HMGB1P49-201ENST00000418882 CD200P41217 278 aa1.57□□□□□ -2.16
HMGB1P49-201ENST00000418882 RPL28P46779 137 aaKnown RBP1.57□□□□□ -2.16
HMGB1P49-201ENST00000418882 FXYD7P58549 80 aa1.57□□□□□ -2.16
HMGB1P49-201ENST00000418882 SUPT4H1P63272 117 aaKnown RBP1.57□□□□□ -2.16
HMGB1P49-201ENST00000418882 RRN3P1Q2M238 152 aa1.57□□□□□ -2.16
HMGB1P49-201ENST00000418882 FKBP1CQ5VVH2 108 aa1.57□□□□□ -2.16
HMGB1P49-201ENST00000418882 SAMD13Q5VXD3 122 aa1.57□□□□□ -2.16
HMGB1P49-201ENST00000418882 TOMM20LQ6UXN7 152 aa1.57□□□□□ -2.16
HMGB1P49-201ENST00000418882 CLVS1Q8IUQ0 354 aaPredicted RBP1.57□□□□□ -2.16
HMGB1P49-201ENST00000418882 TMEM86AQ8N2M4 240 aa1.57□□□□□ -2.16
HMGB1P49-201ENST00000418882 THEM6Q8WUY1 208 aa1.57□□□□□ -2.16
HMGB1P49-201ENST00000418882 CAPZA3Q96KX2 299 aa1.57□□□□□ -2.16
HMGB1P49-201ENST00000418882 GPX7Q96SL4 187 aaPredicted RBP1.57□□□□□ -2.16
HMGB1P49-201ENST00000418882 RNF122Q9H9V4 155 aa1.57□□□□□ -2.16
HMGB1P49-201ENST00000418882 MED11Q9P086 117 aa1.57□□□□□ -2.16
HMGB1P49-201ENST00000418882 GSKIPQ9P0R6 139 aa1.57□□□□□ -2.16
HMGB1P49-201ENST00000418882 HSPB11Q9Y547 144 aa1.57□□□□□ -2.16
HMGB1P49-201ENST00000418882 SPHKAPQ2M3C7 1700 aa1.57□□□□□ -2.16
HMGB1P49-201ENST00000418882 NUP160Q12769 1436 aa1.57□□□□□ -2.16
HMGB1P49-201ENST00000418882 CCDC141Q6ZP82 1450 aa1.56□□□□□ -2.16
HMGB1P49-201ENST00000418882 ASXL1Q8IXJ9 1541 aa1.56□□□□□ -2.16
HMGB1P49-201ENST00000418882 FAM135AQ9P2D6 1515 aa1.56□□□□□ -2.16
HMGB1P49-201ENST00000418882 UNC13BO14795 1591 aa1.56□□□□□ -2.16
HMGB1P49-201ENST00000418882 ARHGEF5Q12774 1597 aa1.56□□□□□ -2.16
HMGB1P49-201ENST00000418882 TARBP1Q13395 1621 aaKnown RBP1.56□□□□□ -2.16
HMGB1P49-201ENST00000418882 IQGAP3Q86VI3 1631 aa1.56□□□□□ -2.16
HMGB1P49-201ENST00000418882 USP32Q8NFA0 1604 aa1.56□□□□□ -2.16
HMGB1P49-201ENST00000418882 RAPGEF6Q8TEU7 1601 aa1.56□□□□□ -2.16
HMGB1P49-201ENST00000418882 KDM5AP29375 1690 aaKnown RBP1.56□□□□□ -2.16
HMGB1P49-201ENST00000418882 DUXBA0A1W2PPF3 345 aa1.56□□□□□ -2.16
HMGB1P49-201ENST00000418882 GRIFINA4D1Z8 144 aa1.56□□□□□ -2.16
HMGB1P49-201ENST00000418882 C11orf86A6NJI1 115 aa1.56□□□□□ -2.16
HMGB1P49-201ENST00000418882 AIPO00170 330 aa1.56□□□□□ -2.16
HMGB1P49-201ENST00000418882 TXNDC9O14530 226 aa1.56□□□□□ -2.16
HMGB1P49-201ENST00000418882 CST8O60676 142 aa1.56□□□□□ -2.16
HMGB1P49-201ENST00000418882 IFNA10P01566 189 aa1.56□□□□□ -2.16
HMGB1P49-201ENST00000418882 OR10J4P0C629 311 aa1.56□□□□□ -2.16
HMGB1P49-201ENST00000418882 FKBP2P26885 142 aaKnown RBP1.56□□□□□ -2.16
HMGB1P49-201ENST00000418882 CASP1P29466 404 aa1.56□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms