RNA–Protein interactions for RNA: ENST00000418518.2

LINCMD1-201, Transcript of long intergenic non-protein coding RNA, muscle differentiation 1, humanhuman

TSL 5 BASIC

Gene LINCMD1, Length 462 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINCMD1-201ENST00000418518 A0A1W2PRF3 423 aa7.16□□□□□ -1.26
LINCMD1-201ENST00000418518 A0A1W2PRM7 423 aa7.16□□□□□ -1.26
LINCMD1-201ENST00000418518 CNIH1O95406 144 aa7.16□□□□□ -1.26
LINCMD1-201ENST00000418518 TMEM11P17152 192 aa7.16□□□□□ -1.26
LINCMD1-201ENST00000418518 BRS3P32247 399 aa7.16□□□□□ -1.26
LINCMD1-201ENST00000418518 ATP5J2P56134 94 aa7.16□□□□□ -1.26
LINCMD1-201ENST00000418518 CX3CL1P78423 397 aa7.16□□□□□ -1.26
LINCMD1-201ENST00000418518 NDPQ00604 133 aa7.16□□□□□ -1.26
LINCMD1-201ENST00000418518 ZNF90Q03938 601 aa7.16□□□□□ -1.26
LINCMD1-201ENST00000418518 HES1Q14469 280 aa7.16□□□□□ -1.26
LINCMD1-201ENST00000418518 ADIRFQ15847 76 aa7.16□□□□□ -1.26
LINCMD1-201ENST00000418518 MORN5Q5VZ52 161 aa7.16□□□□□ -1.26
LINCMD1-201ENST00000418518 C10orf113Q5VZT2 155 aa7.16□□□□□ -1.26
LINCMD1-201ENST00000418518 TTC9CQ8N5M4 171 aa7.16□□□□□ -1.26
LINCMD1-201ENST00000418518 FAM24BQ8N5W8 94 aa7.16□□□□□ -1.26
LINCMD1-201ENST00000418518 Q8N9W7 124 aa7.16□□□□□ -1.26
LINCMD1-201ENST00000418518 OR51G1Q8NGK1 321 aa7.16□□□□□ -1.26
LINCMD1-201ENST00000418518 Q8WTZ3 238 aa7.16□□□□□ -1.26
LINCMD1-201ENST00000418518 TMEM190Q8WZ59 177 aa7.16□□□□□ -1.26
LINCMD1-201ENST00000418518 ANAPC16Q96DE5 110 aa7.16□□□□□ -1.26
LINCMD1-201ENST00000418518 UHRF2Q96PU4 802 aa7.16□□□□□ -1.26
LINCMD1-201ENST00000418518 SSX3Q99909 188 aa7.16□□□□□ -1.26
LINCMD1-201ENST00000418518 TCEAL7Q9BRU2 100 aa7.16□□□□□ -1.26
LINCMD1-201ENST00000418518 C1RLQ9NZP8 487 aa7.16□□□□□ -1.26
LINCMD1-201ENST00000418518 MLXQ9UH92 298 aa7.16□□□□□ -1.26
LINCMD1-201ENST00000418518 TRBV20OR9-2A0A075B6H5 130 aa7.15□□□□□ -1.26
LINCMD1-201ENST00000418518 IGHV4-30-2A0A087WSY4 118 aa7.15□□□□□ -1.26
LINCMD1-201ENST00000418518 IGHV7-81A0A0B4J1V7 117 aa7.15□□□□□ -1.26
LINCMD1-201ENST00000418518 C1orf196B1AJZ1 125 aa7.15□□□□□ -1.26
LINCMD1-201ENST00000418518 OR7C2O60412 319 aa7.15□□□□□ -1.26
LINCMD1-201ENST00000418518 NDUFB4O95168 129 aa7.15□□□□□ -1.26
LINCMD1-201ENST00000418518 IGKV1-17P01599 117 aa7.15□□□□□ -1.26
LINCMD1-201ENST00000418518 FAM106CPP0CH98 169 aa7.15□□□□□ -1.26
LINCMD1-201ENST00000418518 FCGR2BP31994 310 aaPredicted RBP7.15□□□□□ -1.26
LINCMD1-201ENST00000418518 RAB5BP61020 215 aa7.15□□□□□ -1.26
LINCMD1-201ENST00000418518 ZNF674Q2M3X9 581 aa7.15□□□□□ -1.26
LINCMD1-201ENST00000418518 LINC01551Q86U37 167 aa7.15□□□□□ -1.26
LINCMD1-201ENST00000418518 PIP4P2Q8N4L2 257 aa7.15□□□□□ -1.26
LINCMD1-201ENST00000418518 STXBP6Q8NFX7 210 aa7.15□□□□□ -1.26
LINCMD1-201ENST00000418518 OR5AU1Q8NGC0 362 aa7.15□□□□□ -1.26
LINCMD1-201ENST00000418518 C2CD4CQ8TF44 421 aa7.15□□□□□ -1.26
LINCMD1-201ENST00000418518 PERPQ96FX8 193 aa7.15□□□□□ -1.26
LINCMD1-201ENST00000418518 FANCD2OSQ96PS1 177 aa7.15□□□□□ -1.26
LINCMD1-201ENST00000418518 PYGO2Q9BRQ0 406 aa7.15□□□□□ -1.26
LINCMD1-201ENST00000418518 DERL1Q9BUN8 251 aa7.15□□□□□ -1.26
LINCMD1-201ENST00000418518 ZNF355PQ9NSJ1 428 aa7.15□□□□□ -1.26
LINCMD1-201ENST00000418518 ANKRD17O75179 2603 aaKnown RBP7.15□□□□□ -1.26
LINCMD1-201ENST00000418518 TACC2O95359 2948 aa7.14□□□□□ -1.27
LINCMD1-201ENST00000418518 A0A096LNT2 108 aa7.14□□□□□ -1.27
LINCMD1-201ENST00000418518 IGHV1-69DA0A0B4J2H0 117 aa7.14□□□□□ -1.27
LINCMD1-201ENST00000418518 GGTLC3B5MD39 225 aa7.14□□□□□ -1.27
LINCMD1-201ENST00000418518 TGOLN2O43493 480 aa7.14□□□□□ -1.27
LINCMD1-201ENST00000418518 IGHV1-69P01742 117 aa7.14□□□□□ -1.27
LINCMD1-201ENST00000418518 IGHV3-48P01763 117 aa7.14□□□□□ -1.27
LINCMD1-201ENST00000418518 FABP1P07148 127 aa7.14□□□□□ -1.27
LINCMD1-201ENST00000418518 PFN1P07737 140 aaKnown RBP7.14□□□□□ -1.27
LINCMD1-201ENST00000418518 APELAP0DMC3 54 aa7.14□□□□□ -1.27
LINCMD1-201ENST00000418518 EGR2P11161 476 aaPredicted RBP7.14□□□□□ -1.27
LINCMD1-201ENST00000418518 COX6B1P14854 86 aa7.14□□□□□ -1.27
LINCMD1-201ENST00000418518 SLC25A16P16260 332 aa7.14□□□□□ -1.27
LINCMD1-201ENST00000418518 CR1P17927 2039 aa7.14□□□□□ -1.27
LINCMD1-201ENST00000418518 CD24P25063 80 aa7.14□□□□□ -1.27
LINCMD1-201ENST00000418518 MYCNOSP40205 109 aa7.14□□□□□ -1.27
LINCMD1-201ENST00000418518 CRIP2P52943 208 aaPredicted RBP7.14□□□□□ -1.27
LINCMD1-201ENST00000418518 UBE2L3P68036 154 aaKnown RBP7.14□□□□□ -1.27
LINCMD1-201ENST00000418518 ZNF343Q6P1L6 599 aa7.14□□□□□ -1.27
LINCMD1-201ENST00000418518 C16orf82Q7Z2V1 217 aa7.14□□□□□ -1.27
LINCMD1-201ENST00000418518 FXYD5Q96DB9 178 aa7.14□□□□□ -1.27
LINCMD1-201ENST00000418518 PAXXQ9BUH6 204 aa7.14□□□□□ -1.27
LINCMD1-201ENST00000418518 MEGF9Q9H1U4 602 aa7.14□□□□□ -1.27
LINCMD1-201ENST00000418518 TRAV30A0A087WSZ9 112 aa7.13□□□□□ -1.27
LINCMD1-201ENST00000418518 TRAV5A0A0B4J249 113 aa7.13□□□□□ -1.27
LINCMD1-201ENST00000418518 H7BYZ3 331 aa7.13□□□□□ -1.27
LINCMD1-201ENST00000418518 PPP1R2P9O14990 202 aa7.13□□□□□ -1.27
LINCMD1-201ENST00000418518 HYPMO75409 117 aa7.13□□□□□ -1.27
LINCMD1-201ENST00000418518 TOMM40O96008 361 aa7.13□□□□□ -1.27
LINCMD1-201ENST00000418518 CXCL1P09341 107 aa7.13□□□□□ -1.27
LINCMD1-201ENST00000418518 GP9P14770 177 aa7.13□□□□□ -1.27
LINCMD1-201ENST00000418518 YPEL3P61236 119 aaPredicted RBP7.13□□□□□ -1.27
LINCMD1-201ENST00000418518 KIAA0141Q14154 515 aaPredicted RBP7.13□□□□□ -1.27
LINCMD1-201ENST00000418518 FAM120AOSQ5T036 256 aa7.13□□□□□ -1.27
LINCMD1-201ENST00000418518 LINC00305Q7Z4B0 112 aa7.13□□□□□ -1.27
LINCMD1-201ENST00000418518 SGMS2Q8NHU3 365 aa7.13□□□□□ -1.27
LINCMD1-201ENST00000418518 FAM110DQ8TAY7 271 aaPredicted RBP7.13□□□□□ -1.27
LINCMD1-201ENST00000418518 TMEM68Q96MH6 324 aa7.13□□□□□ -1.27
LINCMD1-201ENST00000418518 RBM14Q96PK6 669 aaKnown RBP7.13□□□□□ -1.27
LINCMD1-201ENST00000418518 IMMP2LQ96T52 175 aa7.13□□□□□ -1.27
LINCMD1-201ENST00000418518 OR51M1Q9H341 326 aa7.13□□□□□ -1.27
LINCMD1-201ENST00000418518 BIN3Q9NQY0 253 aa7.13□□□□□ -1.27
LINCMD1-201ENST00000418518 MRPL27Q9P0M9 148 aaKnown RBP7.13□□□□□ -1.27
LINCMD1-201ENST00000418518 TMEM14CQ9P0S9 112 aa7.13□□□□□ -1.27
LINCMD1-201ENST00000418518 PRRC2AP48634 2157 aaKnown RBP7.13□□□□□ -1.27
LINCMD1-201ENST00000418518 TRAV20A0A0B4J274 112 aa7.12□□□□□ -1.27
LINCMD1-201ENST00000418518 NCBP2LA6PVI3 153 aaKnown RBP7.12□□□□□ -1.27
LINCMD1-201ENST00000418518 F8W735 103 aaPredicted RBP7.12□□□□□ -1.27
LINCMD1-201ENST00000418518 GGCTO75223 188 aaKnown RBP7.12□□□□□ -1.27
LINCMD1-201ENST00000418518 MSMBP08118 114 aa7.12□□□□□ -1.27
LINCMD1-201ENST00000418518 PSG1P11464 419 aa7.12□□□□□ -1.27
LINCMD1-201ENST00000418518 HIST1H1BP16401 226 aaKnown RBP7.12□□□□□ -1.27
LINCMD1-201ENST00000418518 GATA3P23771 443 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms