RNA–Protein interactions for RNA: ENST00000418258.5

PTCH1-205, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,815 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-205ENST00000418258 TMEM95Q3KNT9 176 aa9.36□□□□□ -0.91
PTCH1-205ENST00000418258 OTORQ9NRC9 128 aa9.36□□□□□ -0.91
PTCH1-205ENST00000418258 IL36BQ9NZH7 164 aa9.36□□□□□ -0.91
PTCH1-205ENST00000418258 A0A087WX48 190 aa9.35□□□□□ -0.91
PTCH1-205ENST00000418258 TGFBR3LH3BV60 316 aa9.35□□□□□ -0.91
PTCH1-205ENST00000418258 ZNF497Q6ZNH5 498 aa9.35□□□□□ -0.91
PTCH1-205ENST00000418258 RNF182Q8N6D2 247 aa9.35□□□□□ -0.91
PTCH1-205ENST00000418258 SNAI2O43623 268 aa9.35□□□□□ -0.91
PTCH1-205ENST00000418258 ZNF672Q499Z4 452 aaPredicted RBP9.35□□□□□ -0.91
PTCH1-205ENST00000418258 Q6AWC8 147 aa9.35□□□□□ -0.91
PTCH1-205ENST00000418258 TRGV11A0A075B6L2 103 aa9.35□□□□□ -0.91
PTCH1-205ENST00000418258 CD8AP01732 235 aa9.35□□□□□ -0.91
PTCH1-205ENST00000418258 CD59P13987 128 aa9.35□□□□□ -0.91
PTCH1-205ENST00000418258 GNG5P63218 68 aa9.35□□□□□ -0.91
PTCH1-205ENST00000418258 ZNF600Q6ZNG1 722 aa9.35□□□□□ -0.91
PTCH1-205ENST00000418258 EML6Q6ZMW3 1958 aa9.35□□□□□ -0.91
PTCH1-205ENST00000418258 C15orf61A6NNL5 157 aa9.35□□□□□ -0.91
PTCH1-205ENST00000418258 EVI2AP22794 236 aa9.35□□□□□ -0.91
PTCH1-205ENST00000418258 PVRIGQ6DKI7 326 aa9.35□□□□□ -0.91
PTCH1-205ENST00000418258 PARD6GQ9BYG4 376 aaPredicted RBP9.35□□□□□ -0.91
PTCH1-205ENST00000418258 TRAV41A0A0B4J266 112 aa9.35□□□□□ -0.91
PTCH1-205ENST00000418258 CMC4P56277 68 aaPredicted RBP9.35□□□□□ -0.91
PTCH1-205ENST00000418258 UPK2O00526 184 aa9.34□□□□□ -0.91
PTCH1-205ENST00000418258 S100A7L2Q5SY68 101 aa9.34□□□□□ -0.91
PTCH1-205ENST00000418258 KLHL30-AS1Q8NEE0 82 aa9.34□□□□□ -0.91
PTCH1-205ENST00000418258 NLRC5Q86WI3 1866 aa9.34□□□□□ -0.91
PTCH1-205ENST00000418258 EFNA4P52798 201 aa9.34□□□□□ -0.91
PTCH1-205ENST00000418258 NMBP08949 121 aa9.34□□□□□ -0.91
PTCH1-205ENST00000418258 CD28P10747 220 aa9.34□□□□□ -0.91
PTCH1-205ENST00000418258 RIPPLY3P57055 190 aa9.34□□□□□ -0.91
PTCH1-205ENST00000418258 KLRD1Q13241 179 aa9.34□□□□□ -0.91
PTCH1-205ENST00000418258 IGHV3-73A0A0B4J1V6 119 aa9.33□□□□□ -0.92
PTCH1-205ENST00000418258 B4DSR2 109 aa9.33□□□□□ -0.92
PTCH1-205ENST00000418258 VENTXO95231 258 aa9.33□□□□□ -0.92
PTCH1-205ENST00000418258 IGHV4-39P01824 125 aa9.33□□□□□ -0.92
PTCH1-205ENST00000418258 PPIFP30405 207 aaKnown RBP9.33□□□□□ -0.92
PTCH1-205ENST00000418258 CD200R1LQ6Q8B3 271 aa9.33□□□□□ -0.92
PTCH1-205ENST00000418258 COQ2Q96H96 371 aa9.33□□□□□ -0.92
PTCH1-205ENST00000418258 CRIM1Q9NZV1 1036 aa9.33□□□□□ -0.92
PTCH1-205ENST00000418258 IGHV1-46P01743 117 aa9.33□□□□□ -0.92
PTCH1-205ENST00000418258 PUSL1Q8N0Z8 303 aaKnown RBP9.33□□□□□ -0.92
PTCH1-205ENST00000418258 WBP1Q96G27 269 aa9.33□□□□□ -0.92
PTCH1-205ENST00000418258 CST9LQ9H4G1 147 aa9.33□□□□□ -0.92
PTCH1-205ENST00000418258 A0A1B0GW15 77 aa9.33□□□□□ -0.92
PTCH1-205ENST00000418258 OR9G9P0C7N8 305 aa9.33□□□□□ -0.92
PTCH1-205ENST00000418258 FXYD7P58549 80 aa9.33□□□□□ -0.92
PTCH1-205ENST00000418258 EFNB1P98172 346 aa9.33□□□□□ -0.92
PTCH1-205ENST00000418258 ZFP36L1Q07352 338 aaKnown RBP9.33□□□□□ -0.92
PTCH1-205ENST00000418258 LCNL1Q6ZST4 164 aa9.33□□□□□ -0.92
PTCH1-205ENST00000418258 ATP5G3P48201 142 aa9.33□□□□□ -0.92
PTCH1-205ENST00000418258 C15orf32Q32M92 178 aa9.33□□□□□ -0.92
PTCH1-205ENST00000418258 DEPPQ9NTK1 212 aa9.33□□□□□ -0.92
PTCH1-205ENST00000418258 PINLYPA6NC86 204 aa9.33□□□□□ -0.92
PTCH1-205ENST00000418258 PLPPR1Q8TBJ4 325 aa9.33□□□□□ -0.92
PTCH1-205ENST00000418258 RLFQ13129 1914 aa9.33□□□□□ -0.92
PTCH1-205ENST00000418258 BRD3OSQ6XYD6 125 aa9.33□□□□□ -0.92
PTCH1-205ENST00000418258 TMEM86BQ8N661 226 aa9.33□□□□□ -0.92
PTCH1-205ENST00000418258 C14orf144Q96I85 54 aa9.33□□□□□ -0.92
PTCH1-205ENST00000418258 TIMP3P35625 211 aa9.33□□□□□ -0.92
PTCH1-205ENST00000418258 RNASE7Q9H1E1 156 aaKnown RBP9.33□□□□□ -0.92
PTCH1-205ENST00000418258 ZNF257Q9Y2Q1 563 aa9.33□□□□□ -0.92
PTCH1-205ENST00000418258 IGHV2-26A0A0B4J1V2 119 aa9.32□□□□□ -0.92
PTCH1-205ENST00000418258 TYMSP04818 313 aa9.32□□□□□ -0.92
PTCH1-205ENST00000418258 IGHV3-64A0A075B6Q5 118 aa9.32□□□□□ -0.92
PTCH1-205ENST00000418258 MPTX1A8MV57 137 aa9.32□□□□□ -0.92
PTCH1-205ENST00000418258 NAT1P18440 290 aa9.32□□□□□ -0.92
PTCH1-205ENST00000418258 UCP1P25874 307 aa9.32□□□□□ -0.92
PTCH1-205ENST00000418258 C21orf62-AS1Q17RA5 79 aa9.32□□□□□ -0.92
PTCH1-205ENST00000418258 IMMP2LQ96T52 175 aa9.32□□□□□ -0.92
PTCH1-205ENST00000418258 PRB4P10163 310 aaPredicted RBP9.32□□□□□ -0.92
PTCH1-205ENST00000418258 SRSF1Q07955 248 aaKnown RBP eCLIP9.32□□□□□ -0.92
PTCH1-205ENST00000418258 DTX1Q86Y01 620 aa9.32□□□□□ -0.92
PTCH1-205ENST00000418258 RCHY1Q96PM5 261 aa9.32□□□□□ -0.92
PTCH1-205ENST00000418258 A0A0G2JNJ9 132 aa9.32□□□□□ -0.92
PTCH1-205ENST00000418258 H3BUX3 64 aa9.32□□□□□ -0.92
PTCH1-205ENST00000418258 ACTL10Q5JWF8 245 aa9.32□□□□□ -0.92
PTCH1-205ENST00000418258 OR5A1Q8NGJ0 315 aa9.32□□□□□ -0.92
PTCH1-205ENST00000418258 Q9UFV3 132 aa9.32□□□□□ -0.92
PTCH1-205ENST00000418258 LINC00158P58513 81 aa9.32□□□□□ -0.92
PTCH1-205ENST00000418258 TTC9CQ8N5M4 171 aa9.32□□□□□ -0.92
PTCH1-205ENST00000418258 VWCEQ96DN2 955 aa9.32□□□□□ -0.92
PTCH1-205ENST00000418258 CD55P08174 381 aa9.32□□□□□ -0.92
PTCH1-205ENST00000418258 STAG3L3P0CL85 134 aa9.32□□□□□ -0.92
PTCH1-205ENST00000418258 PAX2Q02962 417 aa9.32□□□□□ -0.92
PTCH1-205ENST00000418258 TMEM144Q7Z5S9 345 aa9.31□□□□□ -0.92
PTCH1-205ENST00000418258 IGLV3-12A0A075B6K2 115 aa9.31□□□□□ -0.92
PTCH1-205ENST00000418258 A0A0U1RRA0 63 aa9.31□□□□□ -0.92
PTCH1-205ENST00000418258 TMEM200BQ69YZ2 307 aa9.31□□□□□ -0.92
PTCH1-205ENST00000418258 FAM19A2Q8N3H0 131 aa9.31□□□□□ -0.92
PTCH1-205ENST00000418258 SLC25A15Q9Y619 301 aa9.31□□□□□ -0.92
PTCH1-205ENST00000418258 ADAMTS9Q9P2N4 1935 aa9.31□□□□□ -0.92
PTCH1-205ENST00000418258 TRGV1A0A0A0MS02 117 aa9.31□□□□□ -0.92
PTCH1-205ENST00000418258 IZUMO1RA6ND01 250 aa9.31□□□□□ -0.92
PTCH1-205ENST00000418258 LINC01356Q8N9X3 169 aa9.31□□□□□ -0.92
PTCH1-205ENST00000418258 OR10W1Q8NGF6 305 aa9.31□□□□□ -0.92
PTCH1-205ENST00000418258 ST6GALNAC6Q969X2 333 aa9.31□□□□□ -0.92
PTCH1-205ENST00000418258 RNF114Q9Y508 228 aa9.31□□□□□ -0.92
PTCH1-205ENST00000418258 MLNRO43193 412 aa9.31□□□□□ -0.92
PTCH1-205ENST00000418258 RPL15P61313 204 aaKnown RBP9.31□□□□□ -0.92
PTCH1-205ENST00000418258 FBLIM1Q8WUP2 373 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms