RNA–Protein interactions for RNA: ENST00000417521.5

DDR1-231, Transcript of discoidin domain receptor tyrosine kinase 1, human

TSL 5

Gene DDR1, Length 1,479 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDR1-231	ENST00000417521	PSENEN	Q9NZ42	101 aa		12.34	□□□□□ -0.43
DDR1-231	ENST00000417521	MRPL27	Q9P0M9	148 aa	Known RBP	12.34	□□□□□ -0.43
DDR1-231	ENST00000417521	PAIP2B	Q9ULR5	123 aa	Known RBP	12.34	□□□□□ -0.43
DDR1-231	ENST00000417521	IGHV3-35	A0A0C4DH35	117 aa		12.34	□□□□□ -0.43
DDR1-231	ENST00000417521		F8W735	103 aa	Predicted RBP	12.34	□□□□□ -0.43
DDR1-231	ENST00000417521	FCGR2B	P31994	310 aa	Predicted RBP	12.34	□□□□□ -0.43
DDR1-231	ENST00000417521	RRAS2	P62070	204 aa	Predicted RBP	12.34	□□□□□ -0.43
DDR1-231	ENST00000417521	TMEM190	Q8WZ59	177 aa		12.34	□□□□□ -0.43
DDR1-231	ENST00000417521	SMIM8	Q96KF7	97 aa		12.34	□□□□□ -0.43
DDR1-231	ENST00000417521	TXN2	Q99757	166 aa		12.34	□□□□□ -0.43
DDR1-231	ENST00000417521	CHRDL1	Q9BU40	450 aa		12.34	□□□□□ -0.43
DDR1-231	ENST00000417521	NMES1	Q9C002	83 aa		12.34	□□□□□ -0.43
DDR1-231	ENST00000417521	TUBA4B	Q9H853	241 aa		12.34	□□□□□ -0.43
DDR1-231	ENST00000417521	MLX	Q9UH92	298 aa		12.34	□□□□□ -0.43
DDR1-231	ENST00000417521	HUWE1	Q7Z6Z7	4374 aa	Known RBP	12.33	□□□□□ -0.44
DDR1-231	ENST00000417521	CORT	O00230	105 aa		12.33	□□□□□ -0.44
DDR1-231	ENST00000417521	NDUFA4	O00483	81 aa		12.33	□□□□□ -0.44
DDR1-231	ENST00000417521	IFNA4	P05014	189 aa		12.33	□□□□□ -0.44
DDR1-231	ENST00000417521	OPRK1	P41145	380 aa		12.33	□□□□□ -0.44
DDR1-231	ENST00000417521	CD81	P60033	236 aa		12.33	□□□□□ -0.44
DDR1-231	ENST00000417521	GUCA2B	Q16661	112 aa		12.33	□□□□□ -0.44
DDR1-231	ENST00000417521	LRRC37A5P	Q49AS3	106 aa		12.33	□□□□□ -0.44
DDR1-231	ENST00000417521		Q56UQ5	140 aa		12.33	□□□□□ -0.44
DDR1-231	ENST00000417521	UBAC2	Q8NBM4	344 aa		12.33	□□□□□ -0.44
DDR1-231	ENST00000417521	RCHY1	Q96PM5	261 aa		12.33	□□□□□ -0.44
DDR1-231	ENST00000417521	RAB40C	Q96S21	281 aa		12.33	□□□□□ -0.44
DDR1-231	ENST00000417521	NEURL2	Q9BR09	285 aa		12.33	□□□□□ -0.44
DDR1-231	ENST00000417521	TM2D3	Q9BRN9	247 aa		12.33	□□□□□ -0.44
DDR1-231	ENST00000417521	MRPL36	Q9P0J6	103 aa	Known RBP	12.33	□□□□□ -0.44
DDR1-231	ENST00000417521	TRAV25	A0A0B4J276	109 aa		12.32	□□□□□ -0.44
DDR1-231	ENST00000417521	CTSG	P08311	255 aa		12.32	□□□□□ -0.44
DDR1-231	ENST00000417521	CD7	P09564	240 aa		12.32	□□□□□ -0.44
DDR1-231	ENST00000417521	ADM	P35318	185 aa		12.32	□□□□□ -0.44
DDR1-231	ENST00000417521	MFAP4	P55083	255 aa		12.32	□□□□□ -0.44
DDR1-231	ENST00000417521	CYCS	P99999	105 aa	Known RBP	12.32	□□□□□ -0.44
DDR1-231	ENST00000417521	NOXA1	Q86UR1	476 aa		12.32	□□□□□ -0.44
DDR1-231	ENST00000417521	TMEM61	Q8N0U2	210 aa		12.32	□□□□□ -0.44
DDR1-231	ENST00000417521	RNASEH2C	Q8TDP1	164 aa	Known RBP	12.32	□□□□□ -0.44
DDR1-231	ENST00000417521	C11orf1	Q9H5F2	150 aa		12.32	□□□□□ -0.44
DDR1-231	ENST00000417521	STRAP	Q9Y3F4	350 aa	Known RBP	12.32	□□□□□ -0.44
DDR1-231	ENST00000417521		K7EMT4	169 aa		12.31	□□□□□ -0.44
DDR1-231	ENST00000417521		L7N2F9	121 aa		12.31	□□□□□ -0.44
DDR1-231	ENST00000417521	ATP5I	P56385	69 aa	Predicted RBP	12.31	□□□□□ -0.44
DDR1-231	ENST00000417521	VAMP2	P63027	116 aa		12.31	□□□□□ -0.44
DDR1-231	ENST00000417521	RPP30	P78346	268 aa	Known RBP	12.31	□□□□□ -0.44
DDR1-231	ENST00000417521	PPP1R1C	Q8WVI7	109 aa		12.31	□□□□□ -0.44
DDR1-231	ENST00000417521	DAZ1	Q9NQZ3	744 aa	Known RBP	12.31	□□□□□ -0.44
DDR1-231	ENST00000417521	NUPL2	O15504	423 aa	Known RBP	12.3	□□□□□ -0.44
DDR1-231	ENST00000417521	TSC22D2	O75157	780 aa		12.3	□□□□□ -0.44
DDR1-231	ENST00000417521	CCNK	O75909	580 aa		12.3	□□□□□ -0.44
DDR1-231	ENST00000417521	TAS2R30	P59541	319 aa		12.3	□□□□□ -0.44
DDR1-231	ENST00000417521	RAB11A	P62491	216 aa		12.3	□□□□□ -0.44
DDR1-231	ENST00000417521	REL	Q04864	619 aa	Predicted RBP	12.3	□□□□□ -0.44
DDR1-231	ENST00000417521	HAGH	Q16775	308 aa		12.3	□□□□□ -0.44
DDR1-231	ENST00000417521	BTNL8	Q6UX41	500 aa		12.3	□□□□□ -0.44
DDR1-231	ENST00000417521		Q6ZNX1	250 aa		12.3	□□□□□ -0.44
DDR1-231	ENST00000417521	SLC16A13	Q7RTY0	426 aa		12.3	□□□□□ -0.44
DDR1-231	ENST00000417521		H0YIZ8	118 aa		12.29	□□□□□ -0.44
DDR1-231	ENST00000417521	DEDD	O75618	318 aa		12.29	□□□□□ -0.44
DDR1-231	ENST00000417521	METTL15P1	P0C7V9	234 aa		12.29	□□□□□ -0.44
DDR1-231	ENST00000417521	BCAP31	P51572	246 aa		12.29	□□□□□ -0.44
DDR1-231	ENST00000417521	PRSS54	Q6PEW0	395 aa		12.29	□□□□□ -0.44
DDR1-231	ENST00000417521	LINC00322	Q6ZN03	302 aa	Predicted RBP	12.29	□□□□□ -0.44
DDR1-231	ENST00000417521	RBPMS2	Q6ZRY4	209 aa	Known RBP	12.29	□□□□□ -0.44
DDR1-231	ENST00000417521	KRTAP17-1	Q9BYP8	105 aa		12.29	□□□□□ -0.44
DDR1-231	ENST00000417521	OR5AC2	Q9NZP5	309 aa		12.29	□□□□□ -0.44
DDR1-231	ENST00000417521	RPS10-NUDT3	A0A1W2PQS6	291 aa		12.28	□□□□□ -0.44
DDR1-231	ENST00000417521	OR11H12	B2RN74	326 aa		12.28	□□□□□ -0.44
DDR1-231	ENST00000417521	PRSS46	E5RG02	174 aa		12.28	□□□□□ -0.44
DDR1-231	ENST00000417521	PVALB	P20472	110 aa	Predicted RBP	12.28	□□□□□ -0.44
DDR1-231	ENST00000417521	NPBWR1	P48145	328 aa		12.28	□□□□□ -0.44
DDR1-231	ENST00000417521	CAV2	P51636	162 aa		12.28	□□□□□ -0.44
DDR1-231	ENST00000417521	OR8G2P	Q6IF36	304 aa		12.28	□□□□□ -0.44
DDR1-231	ENST00000417521	TMEM14EP	Q6UXP3	125 aa		12.28	□□□□□ -0.44
DDR1-231	ENST00000417521	DEFB125	Q8N687	156 aa		12.28	□□□□□ -0.44
DDR1-231	ENST00000417521	SPATA25	Q9BR10	227 aa		12.28	□□□□□ -0.44
DDR1-231	ENST00000417521	C20orf24	Q9BUV8	137 aa		12.28	□□□□□ -0.44
DDR1-231	ENST00000417521	SELENOK	Q9Y6D0	94 aa		12.28	□□□□□ -0.44
DDR1-231	ENST00000417521	FAM24A	A6NFZ4	105 aa		12.27	□□□□□ -0.44
DDR1-231	ENST00000417521	PMS2P5	A8MQ11	134 aa		12.27	□□□□□ -0.44
DDR1-231	ENST00000417521	GNG7	O60262	68 aa		12.27	□□□□□ -0.44
DDR1-231	ENST00000417521	SCAF4	O95104	1147 aa	Known RBP	12.27	□□□□□ -0.44
DDR1-231	ENST00000417521	MPC2	O95563	127 aa		12.27	□□□□□ -0.44
DDR1-231	ENST00000417521	RND2	P52198	227 aa		12.27	□□□□□ -0.44
DDR1-231	ENST00000417521	CHAC2	Q8WUX2	184 aa		12.27	□□□□□ -0.44
DDR1-231	ENST00000417521	ACY3	Q96HD9	319 aa		12.27	□□□□□ -0.44
DDR1-231	ENST00000417521	RNF126	Q9BV68	326 aa		12.27	□□□□□ -0.44
DDR1-231	ENST00000417521	RLN2	P04090	185 aa		12.27	□□□□□ -0.45
DDR1-231	ENST00000417521	SLC25A4	P12235	298 aa		12.27	□□□□□ -0.45
DDR1-231	ENST00000417521	GPX4	P36969	197 aa	Predicted RBP	12.27	□□□□□ -0.45
DDR1-231	ENST00000417521	ARL16	Q0P5N6	197 aa		12.27	□□□□□ -0.45
DDR1-231	ENST00000417521	LAMTOR1	Q6IAA8	161 aa		12.27	□□□□□ -0.45
DDR1-231	ENST00000417521	ETFRF1	Q6IPR1	90 aa		12.27	□□□□□ -0.45
DDR1-231	ENST00000417521	OR4X1	Q8NH49	305 aa		12.27	□□□□□ -0.45
DDR1-231	ENST00000417521	ZNF414	Q96IQ9	312 aa		12.27	□□□□□ -0.45
DDR1-231	ENST00000417521	SPAG8	Q99932	426 aa	Predicted RBP	12.27	□□□□□ -0.45
DDR1-231	ENST00000417521	LYRM2	Q9NU23	88 aa	Predicted RBP	12.27	□□□□□ -0.45
DDR1-231	ENST00000417521	TRAV14DV4	A0A0A6YYC5	116 aa		12.26	□□□□□ -0.45
DDR1-231	ENST00000417521	IGSF23	A1L1A6	192 aa		12.26	□□□□□ -0.45
DDR1-231	ENST00000417521	C3orf84	H3BNL1	204 aa		12.26	□□□□□ -0.45

Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms