RNA–Protein interactions for RNA: ENST00000417012.5

LRRTM1-205, Transcript of leucine rich repeat transmembrane neuronal 1, humanhuman

TSL 1 (best)

Gene LRRTM1, Length 3,021 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1-205ENST00000417012 FAM169BQ8N8A8 192 aa10.4□□□□□ -0.74
LRRTM1-205ENST00000417012 OR10W1Q8NGF6 305 aa10.4□□□□□ -0.74
LRRTM1-205ENST00000417012 GRAMD2BQ96HH9 432 aa10.4□□□□□ -0.74
LRRTM1-205ENST00000417012 VPS25Q9BRG1 176 aa10.4□□□□□ -0.74
LRRTM1-205ENST00000417012 CHRDL1Q9BU40 450 aa10.4□□□□□ -0.74
LRRTM1-205ENST00000417012 TANC2Q9HCD6 1990 aa10.39□□□□□ -0.75
LRRTM1-205ENST00000417012 PEX7O00628 323 aa10.39□□□□□ -0.75
LRRTM1-205ENST00000417012 TSPOP30536 169 aa10.39□□□□□ -0.75
LRRTM1-205ENST00000417012 ERHP84090 104 aaKnown RBP10.39□□□□□ -0.75
LRRTM1-205ENST00000417012 FAM27E3Q08E93 113 aa10.39□□□□□ -0.75
LRRTM1-205ENST00000417012 TNXAQ16473 311 aa10.39□□□□□ -0.75
LRRTM1-205ENST00000417012 TBR1Q16650 682 aa10.39□□□□□ -0.75
LRRTM1-205ENST00000417012 C1orf185Q5T7R7 199 aa10.39□□□□□ -0.75
LRRTM1-205ENST00000417012 Q6ZS92 163 aa10.39□□□□□ -0.75
LRRTM1-205ENST00000417012 NUP35Q8NFH5 326 aa10.39□□□□□ -0.75
LRRTM1-205ENST00000417012 MBD6Q96DN6 1003 aa10.39□□□□□ -0.75
LRRTM1-205ENST00000417012 PAXXQ9BUH6 204 aa10.39□□□□□ -0.75
LRRTM1-205ENST00000417012 DSCAML1Q8TD84 2053 aa10.39□□□□□ -0.75
LRRTM1-205ENST00000417012 CUL9Q8IWT3 2517 aa10.39□□□□□ -0.75
LRRTM1-205ENST00000417012 FAM181BA6NEQ2 426 aa10.39□□□□□ -0.75
LRRTM1-205ENST00000417012 NDUFB8O95169 186 aa10.39□□□□□ -0.75
LRRTM1-205ENST00000417012 TMEM30BQ3MIR4 351 aa10.39□□□□□ -0.75
LRRTM1-205ENST00000417012 ASPHD1Q5U4P2 390 aa10.39□□□□□ -0.75
LRRTM1-205ENST00000417012 PRR27Q6MZM9 219 aa10.39□□□□□ -0.75
LRRTM1-205ENST00000417012 RNASEKQ6P5S7 137 aaKnown RBP10.39□□□□□ -0.75
LRRTM1-205ENST00000417012 IGFL3Q6UXB1 125 aa10.39□□□□□ -0.75
LRRTM1-205ENST00000417012 SLC25A48Q6ZT89 311 aaKnown RBP10.39□□□□□ -0.75
LRRTM1-205ENST00000417012 DEFB108BQ8NET1 73 aa10.39□□□□□ -0.75
LRRTM1-205ENST00000417012 RND1Q92730 232 aa10.39□□□□□ -0.75
LRRTM1-205ENST00000417012 SNRNP40Q96DI7 357 aaKnown RBP10.39□□□□□ -0.75
LRRTM1-205ENST00000417012 RNF7Q9UBF6 113 aa10.39□□□□□ -0.75
LRRTM1-205ENST00000417012 PSMB11A5LHX3 300 aa10.39□□□□□ -0.75
LRRTM1-205ENST00000417012 PYYP10082 97 aa10.39□□□□□ -0.75
LRRTM1-205ENST00000417012 RBX1P62877 108 aa10.39□□□□□ -0.75
LRRTM1-205ENST00000417012 OR1L4Q8NGR5 311 aa10.39□□□□□ -0.75
LRRTM1-205ENST00000417012 OR2T6Q8NHC8 308 aa10.39□□□□□ -0.75
LRRTM1-205ENST00000417012 ORAOV1Q8WV07 137 aa10.39□□□□□ -0.75
LRRTM1-205ENST00000417012 RPUSD1Q9UJJ7 312 aaKnown RBP10.39□□□□□ -0.75
LRRTM1-205ENST00000417012 MRPS16Q9Y3D3 137 aaKnown RBP10.39□□□□□ -0.75
LRRTM1-205ENST00000417012 CEP295Q9C0D2 2601 aa10.38□□□□□ -0.75
LRRTM1-205ENST00000417012 APOA2P02652 100 aa10.38□□□□□ -0.75
LRRTM1-205ENST00000417012 HIST1H1EP10412 219 aaKnown RBP10.38□□□□□ -0.75
LRRTM1-205ENST00000417012 CEACAM8P31997 349 aaPredicted RBP10.38□□□□□ -0.75
LRRTM1-205ENST00000417012 KLF5Q13887 457 aaPredicted RBP10.38□□□□□ -0.75
LRRTM1-205ENST00000417012 Q56UQ5 140 aa10.38□□□□□ -0.75
LRRTM1-205ENST00000417012 C10orf113Q5VZT2 155 aa10.38□□□□□ -0.75
LRRTM1-205ENST00000417012 ZNF329Q86UD4 541 aa10.38□□□□□ -0.75
LRRTM1-205ENST00000417012 NUDT10Q8NFP7 164 aa10.38□□□□□ -0.75
LRRTM1-205ENST00000417012 FAM222BQ8WU58 562 aa10.38□□□□□ -0.75
LRRTM1-205ENST00000417012 NUDT11Q96G61 164 aa10.38□□□□□ -0.75
LRRTM1-205ENST00000417012 HARBI1Q96MB7 349 aa10.38□□□□□ -0.75
LRRTM1-205ENST00000417012 SH3BGRL2Q9UJC5 107 aa10.38□□□□□ -0.75
LRRTM1-205ENST00000417012 TRAV9-2A0A087WT02 112 aa10.38□□□□□ -0.75
LRRTM1-205ENST00000417012 HINT1P49773 126 aaPredicted RBP10.38□□□□□ -0.75
LRRTM1-205ENST00000417012 UBE2G1P62253 170 aa10.38□□□□□ -0.75
LRRTM1-205ENST00000417012 S100A7AQ86SG5 101 aa10.38□□□□□ -0.75
LRRTM1-205ENST00000417012 OSR1Q8TAX0 266 aaPredicted RBP10.38□□□□□ -0.75
LRRTM1-205ENST00000417012 ZNRD1Q9P1U0 126 aa10.38□□□□□ -0.75
LRRTM1-205ENST00000417012 GLRXP35754 106 aa10.37□□□□□ -0.75
LRRTM1-205ENST00000417012 RPL8P62917 257 aaKnown RBP10.37□□□□□ -0.75
LRRTM1-205ENST00000417012 TIMM23BQ5SRD1 257 aa10.37□□□□□ -0.75
LRRTM1-205ENST00000417012 GDF5OSQ5U4N7 250 aa10.37□□□□□ -0.75
LRRTM1-205ENST00000417012 GAFA1Q96PS6 74 aa10.37□□□□□ -0.75
LRRTM1-205ENST00000417012 CCL13Q99616 98 aa10.37□□□□□ -0.75
LRRTM1-205ENST00000417012 ZNF430Q9H8G1 570 aaPredicted RBP10.37□□□□□ -0.75
LRRTM1-205ENST00000417012 TMEM238LA0A1B0GVL6 79 aa10.37□□□□□ -0.75
LRRTM1-205ENST00000417012 HIGD1CA8MV81 97 aa10.37□□□□□ -0.75
LRRTM1-205ENST00000417012 CAMPP49913 170 aa10.37□□□□□ -0.75
LRRTM1-205ENST00000417012 PTTG1IPP53801 180 aa10.37□□□□□ -0.75
LRRTM1-205ENST00000417012 FAM216BQ8N7L0 139 aa10.37□□□□□ -0.75
LRRTM1-205ENST00000417012 ALKBH7Q9BT30 221 aaPredicted RBP10.37□□□□□ -0.75
LRRTM1-205ENST00000417012 NDUFA4L2Q9NRX3 87 aa10.37□□□□□ -0.75
LRRTM1-205ENST00000417012 TNFRSF19Q9NS68 423 aa10.37□□□□□ -0.75
LRRTM1-205ENST00000417012 IGHV2-26A0A0B4J1V2 119 aa10.36□□□□□ -0.75
LRRTM1-205ENST00000417012 CIDEAO60543 219 aa10.36□□□□□ -0.75
LRRTM1-205ENST00000417012 OR2J3O76001 311 aa10.36□□□□□ -0.75
LRRTM1-205ENST00000417012 GATA4P43694 442 aa10.36□□□□□ -0.75
LRRTM1-205ENST00000417012 OR8B3Q8NGG8 313 aa10.36□□□□□ -0.75
LRRTM1-205ENST00000417012 OR8B2Q96RD0 313 aa10.36□□□□□ -0.75
LRRTM1-205ENST00000417012 SSBP4Q9BWG4 385 aaPredicted RBP10.36□□□□□ -0.75
LRRTM1-205ENST00000417012 A0A1W2PN81 502 aa10.36□□□□□ -0.75
LRRTM1-205ENST00000417012 GPR6P46095 362 aaPredicted RBP10.36□□□□□ -0.75
LRRTM1-205ENST00000417012 TNFAIP6P98066 277 aaPredicted RBP10.36□□□□□ -0.75
LRRTM1-205ENST00000417012 EBLN2Q6P2I7 272 aa10.36□□□□□ -0.75
LRRTM1-205ENST00000417012 ATP5L2Q7Z4Y8 100 aa10.36□□□□□ -0.75
LRRTM1-205ENST00000417012 MRPL20Q9BYC9 149 aaKnown RBP10.36□□□□□ -0.75
LRRTM1-205ENST00000417012 GAL3ST2Q9H3Q3 398 aa10.36□□□□□ -0.75
LRRTM1-205ENST00000417012 LINC00574Q9H8X3 128 aa10.36□□□□□ -0.75
LRRTM1-205ENST00000417012 RAI1Q7Z5J4 1906 aaPredicted RBP10.36□□□□□ -0.75
LRRTM1-205ENST00000417012 LOC102724200A0A096LPH7 203 aaPredicted RBP10.36□□□□□ -0.75
LRRTM1-205ENST00000417012 hADV38S2A0JD32 116 aa10.36□□□□□ -0.75
LRRTM1-205ENST00000417012 SSBP2P81877 361 aaPredicted RBP10.36□□□□□ -0.75
LRRTM1-205ENST00000417012 PKDREJQ9NTG1 2253 aa10.36□□□□□ -0.75
LRRTM1-205ENST00000417012 TCRBV4S1A1TA0A5B7 111 aa10.35□□□□□ -0.75
LRRTM1-205ENST00000417012 ZNF738Q8NE65 137 aa10.35□□□□□ -0.75
LRRTM1-205ENST00000417012 NPIPB3Q92617 1050 aa10.35□□□□□ -0.75
LRRTM1-205ENST00000417012 RNF24Q9Y225 148 aa10.35□□□□□ -0.75
LRRTM1-205ENST00000417012 IGLV3-9A0A075B6K5 115 aa10.35□□□□□ -0.75
LRRTM1-205ENST00000417012 FAM162BQ5T6X4 162 aa10.35□□□□□ -0.75
LRRTM1-205ENST00000417012 UNQ5815/PRO19632Q6UWF5 114 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms