RNA–Protein interactions for RNA: ENST00000416571.5

MDC1-202, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-202ENST00000416571 HLA-DRB4P13762 266 aa7.16□□□□□ -1.26
MDC1-202ENST00000416571 RPL5P46777 297 aaKnown RBP7.16□□□□□ -1.26
MDC1-202ENST00000416571 MLANAQ16655 118 aa7.16□□□□□ -1.26
MDC1-202ENST00000416571 TRIM16LQ309B1 348 aa7.16□□□□□ -1.26
MDC1-202ENST00000416571 SIGLEC15Q6ZMC9 328 aa7.16□□□□□ -1.26
MDC1-202ENST00000416571 ZNF705AQ6ZN79 300 aaPredicted RBP7.16□□□□□ -1.26
MDC1-202ENST00000416571 OR1S2Q8NGQ3 325 aa7.16□□□□□ -1.26
MDC1-202ENST00000416571 GLMPQ8WWB7 406 aa7.16□□□□□ -1.26
MDC1-202ENST00000416571 RRNAD1Q96FB5 475 aaKnown RBP7.16□□□□□ -1.26
MDC1-202ENST00000416571 NIPSNAP3BQ9BS92 247 aa7.16□□□□□ -1.26
MDC1-202ENST00000416571 SEPSECSQ9HD40 501 aaKnown RBP7.16□□□□□ -1.26
MDC1-202ENST00000416571 NRN1Q9NPD7 142 aa7.16□□□□□ -1.26
MDC1-202ENST00000416571 TMED3Q9Y3Q3 217 aa7.16□□□□□ -1.26
MDC1-202ENST00000416571 HLA-DRB4X5D2U9 266 aa7.16□□□□□ -1.26
MDC1-202ENST00000416571 DYNC1H1Q14204 4646 aaKnown RBP7.15□□□□□ -1.26
MDC1-202ENST00000416571 A0A0B4J293 547 aa7.15□□□□□ -1.26
MDC1-202ENST00000416571 ZNF705FA8MVS1 300 aaPredicted RBP7.15□□□□□ -1.26
MDC1-202ENST00000416571 IGKV1-5P01602 117 aa7.15□□□□□ -1.26
MDC1-202ENST00000416571 IGKV3-20P01619 116 aa7.15□□□□□ -1.26
MDC1-202ENST00000416571 ZNF705DP0CH99 300 aaPredicted RBP7.15□□□□□ -1.26
MDC1-202ENST00000416571 ZNF705BP0CI00 300 aaPredicted RBP7.15□□□□□ -1.26
MDC1-202ENST00000416571 SLC25A4P12235 298 aa7.15□□□□□ -1.26
MDC1-202ENST00000416571 RCVRNP35243 200 aa7.15□□□□□ -1.26
MDC1-202ENST00000416571 HTR2BP41595 481 aa7.15□□□□□ -1.26
MDC1-202ENST00000416571 PIGPP57054 158 aa7.15□□□□□ -1.26
MDC1-202ENST00000416571 NEDD8Q15843 81 aa7.15□□□□□ -1.26
MDC1-202ENST00000416571 FAM222AQ5U5X8 452 aa7.15□□□□□ -1.26
MDC1-202ENST00000416571 MAPKAPK5-AS1Q8N8E1 139 aa7.15□□□□□ -1.26
MDC1-202ENST00000416571 GPX8Q8TED1 209 aa7.15□□□□□ -1.26
MDC1-202ENST00000416571 ZNF486Q96H40 463 aaPredicted RBP7.15□□□□□ -1.26
MDC1-202ENST00000416571 Q9H521 79 aa7.15□□□□□ -1.26
MDC1-202ENST00000416571 SCPEP1Q9HB40 452 aa7.15□□□□□ -1.26
MDC1-202ENST00000416571 U3KQE9 123 aa7.15□□□□□ -1.26
MDC1-202ENST00000416571 C3orf85A0A1B0GTC6 90 aa7.14□□□□□ -1.27
MDC1-202ENST00000416571 CDK2AP2O75956 126 aa7.14□□□□□ -1.27
MDC1-202ENST00000416571 IGLC1P0CG04 106 aa7.14□□□□□ -1.27
MDC1-202ENST00000416571 PI3P19957 117 aa7.14□□□□□ -1.27
MDC1-202ENST00000416571 OR10J1P30954 320 aa7.14□□□□□ -1.27
MDC1-202ENST00000416571 NKX2-1P43699 371 aaPredicted RBP7.14□□□□□ -1.27
MDC1-202ENST00000416571 RND2P52198 227 aa7.14□□□□□ -1.27
MDC1-202ENST00000416571 FXYD7P58549 80 aa7.14□□□□□ -1.27
MDC1-202ENST00000416571 YPEL3P61236 119 aaPredicted RBP7.14□□□□□ -1.27
MDC1-202ENST00000416571 RND3P61587 244 aa7.14□□□□□ -1.27
MDC1-202ENST00000416571 DHODHQ02127 395 aa7.14□□□□□ -1.27
MDC1-202ENST00000416571 ETFRF1Q6IPR1 90 aa7.14□□□□□ -1.27
MDC1-202ENST00000416571 SNX29P2Q8IUI4 249 aa7.14□□□□□ -1.27
MDC1-202ENST00000416571 OR4B1Q8NGF8 309 aa7.14□□□□□ -1.27
MDC1-202ENST00000416571 TP53RKQ96S44 253 aa7.14□□□□□ -1.27
MDC1-202ENST00000416571 C7orf50Q9BRJ6 194 aaKnown RBP7.14□□□□□ -1.27
MDC1-202ENST00000416571 ATG101Q9BSB4 218 aa7.14□□□□□ -1.27
MDC1-202ENST00000416571 YTHDF1Q9BYJ9 559 aaKnown RBP7.14□□□□□ -1.27
MDC1-202ENST00000416571 HEYLQ9NQ87 328 aaPredicted RBP7.14□□□□□ -1.27
MDC1-202ENST00000416571 COPZ2Q9P299 210 aa7.14□□□□□ -1.27
MDC1-202ENST00000416571 DKK2Q9UBU2 259 aa7.14□□□□□ -1.27
MDC1-202ENST00000416571 PFDN2Q9UHV9 154 aa7.14□□□□□ -1.27
MDC1-202ENST00000416571 GOLT1BQ9Y3E0 138 aa7.14□□□□□ -1.27
MDC1-202ENST00000416571 NACAE9PAV3 2078 aa7.13□□□□□ -1.27
MDC1-202ENST00000416571 LOC102723971A0A1B0GUV8 181 aa7.13□□□□□ -1.27
MDC1-202ENST00000416571 BUB3O43684 328 aa7.13□□□□□ -1.27
MDC1-202ENST00000416571 HBE1P02100 147 aa7.13□□□□□ -1.27
MDC1-202ENST00000416571 P0C879 139 aa7.13□□□□□ -1.27
MDC1-202ENST00000416571 NUP62P37198 522 aaPredicted RBP7.13□□□□□ -1.27
MDC1-202ENST00000416571 ID1P41134 155 aa7.13□□□□□ -1.27
MDC1-202ENST00000416571 FAM3BP58499 235 aaPredicted RBP7.13□□□□□ -1.27
MDC1-202ENST00000416571 SPCS3P61009 180 aa7.13□□□□□ -1.27
MDC1-202ENST00000416571 DAD1P61803 113 aa7.13□□□□□ -1.27
MDC1-202ENST00000416571 OXA1LQ15070 435 aa7.13□□□□□ -1.27
MDC1-202ENST00000416571 USF2Q15853 346 aaPredicted RBP7.13□□□□□ -1.27
MDC1-202ENST00000416571 BSXQ3C1V8 233 aa7.13□□□□□ -1.27
MDC1-202ENST00000416571 PRSS54Q6PEW0 395 aa7.13□□□□□ -1.27
MDC1-202ENST00000416571 TMEM88Q6PEY1 159 aa7.13□□□□□ -1.27
MDC1-202ENST00000416571 CCDC71LQ8N9Z2 235 aa7.13□□□□□ -1.27
MDC1-202ENST00000416571 COQ8AQ8NI60 647 aa7.13□□□□□ -1.27
MDC1-202ENST00000416571 RNASEH2CQ8TDP1 164 aaKnown RBP7.13□□□□□ -1.27
MDC1-202ENST00000416571 LINC00052Q96N35 136 aa7.13□□□□□ -1.27
MDC1-202ENST00000416571 DMBT1Q9UGM3 2413 aaPredicted RBP7.13□□□□□ -1.27
MDC1-202ENST00000416571 CEBPZOSA8MTT3 80 aa7.12□□□□□ -1.27
MDC1-202ENST00000416571 M0QYG6 137 aa7.12□□□□□ -1.27
MDC1-202ENST00000416571 TOMM40O96008 361 aa7.12□□□□□ -1.27
MDC1-202ENST00000416571 RD3LP0DJH9 198 aa7.12□□□□□ -1.27
MDC1-202ENST00000416571 TGFBR1P36897 503 aa7.12□□□□□ -1.27
MDC1-202ENST00000416571 RPS19P39019 145 aaKnown RBP7.12□□□□□ -1.27
MDC1-202ENST00000416571 RRN3P1Q2M238 152 aa7.12□□□□□ -1.27
MDC1-202ENST00000416571 SP6Q3SY56 376 aa7.12□□□□□ -1.27
MDC1-202ENST00000416571 C2orf83Q53S99 150 aa7.12□□□□□ -1.27
MDC1-202ENST00000416571 RNASE10Q5GAN6 216 aaKnown RBP7.12□□□□□ -1.27
MDC1-202ENST00000416571 GDF5OSQ5U4N7 250 aa7.12□□□□□ -1.27
MDC1-202ENST00000416571 GSG1LQ6UXU4 331 aa7.12□□□□□ -1.27
MDC1-202ENST00000416571 FOXI2Q6ZQN5 318 aa7.12□□□□□ -1.27
MDC1-202ENST00000416571 C15orf53Q8NAA6 179 aa7.12□□□□□ -1.27
MDC1-202ENST00000416571 SLC24A4Q8NFF2 622 aa7.12□□□□□ -1.27
MDC1-202ENST00000416571 ACY3Q96HD9 319 aa7.12□□□□□ -1.27
MDC1-202ENST00000416571 PBDC1Q9BVG4 233 aa7.12□□□□□ -1.27
MDC1-202ENST00000416571 SAV1Q9H4B6 383 aaPredicted RBP7.12□□□□□ -1.27
MDC1-202ENST00000416571 CTNNBIP1Q9NSA3 81 aaPredicted RBP7.12□□□□□ -1.27
MDC1-202ENST00000416571 COMMD3Q9UBI1 195 aa7.12□□□□□ -1.27
MDC1-202ENST00000416571 YTHDF2Q9Y5A9 579 aaKnown RBP7.12□□□□□ -1.27
MDC1-202ENST00000416571 A0A0G2JRQ6 117 aa7.11□□□□□ -1.27
MDC1-202ENST00000416571 B3GALNT1O75752 331 aa7.11□□□□□ -1.27
MDC1-202ENST00000416571 APOA1P02647 267 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms