RNA–Protein interactions for RNA: ENST00000416188.2

PHRF1-203, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PHRF1, Length 5,227 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-203ENST00000416188 TRAV8-6A0A0B4J262 113 aa12.9□□□□□ -0.34
PHRF1-203ENST00000416188 NUTF2P61970 127 aaKnown RBP12.9□□□□□ -0.34
PHRF1-203ENST00000416188 ZNF414Q96IQ9 312 aa12.9□□□□□ -0.34
PHRF1-203ENST00000416188 Q9H3A6 140 aa12.9□□□□□ -0.34
PHRF1-203ENST00000416188 SCN8AQ9UQD0 1980 aa12.9□□□□□ -0.34
PHRF1-203ENST00000416188 ASIPP42127 132 aa12.9□□□□□ -0.34
PHRF1-203ENST00000416188 ITLN2Q8WWU7 325 aaPredicted RBP12.9□□□□□ -0.34
PHRF1-203ENST00000416188 FER1L5A0AVI2 2057 aa12.9□□□□□ -0.34
PHRF1-203ENST00000416188 LEMD1Q68G75 181 aa12.9□□□□□ -0.34
PHRF1-203ENST00000416188 C15orf61A6NNL5 157 aa12.89□□□□□ -0.35
PHRF1-203ENST00000416188 OR11H12B2RN74 326 aa12.89□□□□□ -0.35
PHRF1-203ENST00000416188 PLP1P60201 277 aa12.89□□□□□ -0.35
PHRF1-203ENST00000416188 CIRBPQ14011 172 aaKnown RBP12.89□□□□□ -0.35
PHRF1-203ENST00000416188 REC114Q7Z4M0 266 aa12.89□□□□□ -0.35
PHRF1-203ENST00000416188 OR11H1Q8NG94 326 aa12.89□□□□□ -0.35
PHRF1-203ENST00000416188 OR11H2Q8NH07 326 aa12.89□□□□□ -0.35
PHRF1-203ENST00000416188 TIMM23O14925 209 aa12.89□□□□□ -0.35
PHRF1-203ENST00000416188 APOHP02749 345 aaPredicted RBP12.89□□□□□ -0.35
PHRF1-203ENST00000416188 RNASE1P07998 156 aaKnown RBP12.89□□□□□ -0.35
PHRF1-203ENST00000416188 SUMO2P61956 95 aaKnown RBP12.89□□□□□ -0.35
PHRF1-203ENST00000416188 TMEM170BQ5T4T1 132 aa12.89□□□□□ -0.35
PHRF1-203ENST00000416188 LRTM2Q8N967 370 aa12.89□□□□□ -0.35
PHRF1-203ENST00000416188 SELLP14151 372 aa12.89□□□□□ -0.35
PHRF1-203ENST00000416188 PAPPA-AS1Q5QFB9 102 aa12.89□□□□□ -0.35
PHRF1-203ENST00000416188 ERASQ7Z444 233 aa12.89□□□□□ -0.35
PHRF1-203ENST00000416188 RPP21Q9H633 154 aaKnown RBP12.89□□□□□ -0.35
PHRF1-203ENST00000416188 PPP1R17O96001 155 aa12.89□□□□□ -0.35
PHRF1-203ENST00000416188 ID3Q02535 119 aa12.89□□□□□ -0.35
PHRF1-203ENST00000416188 PLAURQ03405 335 aa12.89□□□□□ -0.35
PHRF1-203ENST00000416188 TBL2Q9Y4P3 447 aaKnown RBP12.88□□□□□ -0.35
PHRF1-203ENST00000416188 H3BUX3 64 aa12.88□□□□□ -0.35
PHRF1-203ENST00000416188 RPL23P62829 140 aaKnown RBP12.88□□□□□ -0.35
PHRF1-203ENST00000416188 KLRD1Q13241 179 aa12.88□□□□□ -0.35
PHRF1-203ENST00000416188 DUTP33316 252 aaKnown RBP12.88□□□□□ -0.35
PHRF1-203ENST00000416188 GNG5P63218 68 aa12.88□□□□□ -0.35
PHRF1-203ENST00000416188 FAM169BQ8N8A8 192 aa12.88□□□□□ -0.35
PHRF1-203ENST00000416188 NPFFO15130 113 aa12.88□□□□□ -0.35
PHRF1-203ENST00000416188 ZNF324BQ6AW86 544 aaPredicted RBP12.88□□□□□ -0.35
PHRF1-203ENST00000416188 TMEM262E9PQX1 116 aa12.87□□□□□ -0.35
PHRF1-203ENST00000416188 MSMBP08118 114 aa12.87□□□□□ -0.35
PHRF1-203ENST00000416188 ZNF600Q6ZNG1 722 aa12.87□□□□□ -0.35
PHRF1-203ENST00000416188 FMC1Q96HJ9 113 aa12.87□□□□□ -0.35
PHRF1-203ENST00000416188 SLX1AQ9BQ83 275 aa12.87□□□□□ -0.35
PHRF1-203ENST00000416188 RNASE7Q9H1E1 156 aaKnown RBP12.87□□□□□ -0.35
PHRF1-203ENST00000416188 CLDN16Q9Y5I7 305 aa12.87□□□□□ -0.35
PHRF1-203ENST00000416188 DOCK7Q96N67 2140 aa12.87□□□□□ -0.35
PHRF1-203ENST00000416188 MPDZO75970 2070 aa12.87□□□□□ -0.35
PHRF1-203ENST00000416188 TMEM219Q86XT9 240 aa12.87□□□□□ -0.35
PHRF1-203ENST00000416188 FAM19A2Q8N3H0 131 aa12.87□□□□□ -0.35
PHRF1-203ENST00000416188 FAM215AQ9Y5M1 114 aa12.87□□□□□ -0.35
PHRF1-203ENST00000416188 CIARTQ8N365 385 aaPredicted RBP12.87□□□□□ -0.35
PHRF1-203ENST00000416188 C14orf144Q96I85 54 aa12.87□□□□□ -0.35
PHRF1-203ENST00000416188 TNFRSF18Q9Y5U5 241 aa12.87□□□□□ -0.35
PHRF1-203ENST00000416188 DOCK9Q9BZ29 2069 aa12.87□□□□□ -0.35
PHRF1-203ENST00000416188 SNAI2O43623 268 aa12.87□□□□□ -0.35
PHRF1-203ENST00000416188 OR9G9P0C7N8 305 aa12.87□□□□□ -0.35
PHRF1-203ENST00000416188 TAS2R60P59551 318 aa12.87□□□□□ -0.35
PHRF1-203ENST00000416188 BEX4Q9NWD9 120 aaPredicted RBP12.87□□□□□ -0.35
PHRF1-203ENST00000416188 LINC00527Q9UJ94 153 aa12.87□□□□□ -0.35
PHRF1-203ENST00000416188 RPUSD1Q9UJJ7 312 aaKnown RBP12.87□□□□□ -0.35
PHRF1-203ENST00000416188 KIAA2026Q5HYC2 2103 aa12.87□□□□□ -0.35
PHRF1-203ENST00000416188 HEATR1Q9H583 2144 aaKnown RBP12.87□□□□□ -0.35
PHRF1-203ENST00000416188 HIGD1CA8MV81 97 aa12.86□□□□□ -0.35
PHRF1-203ENST00000416188 TNFSF13O75888 250 aa12.86□□□□□ -0.35
PHRF1-203ENST00000416188 PYYP10082 97 aa12.86□□□□□ -0.35
PHRF1-203ENST00000416188 CTAG1AP78358 180 aa12.86□□□□□ -0.35
PHRF1-203ENST00000416188 OTOGLQ3ZCN5 2332 aa12.86□□□□□ -0.35
PHRF1-203ENST00000416188 NAPSAO96009 420 aa12.86□□□□□ -0.35
PHRF1-203ENST00000416188 FER1L6-AS1Q8NA97 138 aa12.86□□□□□ -0.35
PHRF1-203ENST00000416188 DEFB121Q5J5C9 76 aa12.85□□□□□ -0.35
PHRF1-203ENST00000416188 GCSAMLQ5JQS6 135 aa12.85□□□□□ -0.35
PHRF1-203ENST00000416188 DUX3Q96PT4 197 aa12.85□□□□□ -0.35
PHRF1-203ENST00000416188 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.85□□□□□ -0.352e-7■■■■□ 23.9
PHRF1-203ENST00000416188 PARD6GQ9BYG4 376 aaPredicted RBP12.85□□□□□ -0.35
PHRF1-203ENST00000416188 TP53BP1Q12888 1972 aaPredicted RBP12.85□□□□□ -0.35
PHRF1-203ENST00000416188 IGHV2-26A0A0B4J1V2 119 aa12.85□□□□□ -0.35
PHRF1-203ENST00000416188 HGFACQ04756 655 aa12.85□□□□□ -0.35
PHRF1-203ENST00000416188 RNF125Q96EQ8 232 aa12.85□□□□□ -0.35
PHRF1-203ENST00000416188 PROK2Q9HC23 129 aa12.85□□□□□ -0.35
PHRF1-203ENST00000416188 WDR81Q562E7 1941 aa12.85□□□□□ -0.35
PHRF1-203ENST00000416188 IGKV1-27A0A075B6S5 117 aa12.85□□□□□ -0.35
PHRF1-203ENST00000416188 H7C1H1 209 aa12.85□□□□□ -0.35
PHRF1-203ENST00000416188 RNASE4P34096 147 aaKnown RBP12.85□□□□□ -0.35
PHRF1-203ENST00000416188 FAM71F2Q6NXP2 309 aa12.85□□□□□ -0.35
PHRF1-203ENST00000416188 TNFRSF14Q92956 283 aa12.85□□□□□ -0.35
PHRF1-203ENST00000416188 A0A087WWC5 75 aa12.85□□□□□ -0.35
PHRF1-203ENST00000416188 PGPEP1LA6NFU8 196 aa12.85□□□□□ -0.35
PHRF1-203ENST00000416188 CCL20P78556 96 aa12.85□□□□□ -0.35
PHRF1-203ENST00000416188 JOSD1Q15040 202 aaPredicted RBP12.85□□□□□ -0.35
PHRF1-203ENST00000416188 GLMPQ8WWB7 406 aa12.85□□□□□ -0.35
PHRF1-203ENST00000416188 ST6GALNAC6Q969X2 333 aa12.85□□□□□ -0.35
PHRF1-203ENST00000416188 TMEM200BQ69YZ2 307 aa12.84□□□□□ -0.35
PHRF1-203ENST00000416188 ANAPC1Q9H1A4 1944 aa12.84□□□□□ -0.35
PHRF1-203ENST00000416188 C5orf63A6NC05 138 aa12.84□□□□□ -0.35
PHRF1-203ENST00000416188 PSPNO60542 156 aa12.84□□□□□ -0.35
PHRF1-203ENST00000416188 CR1LQ2VPA4 569 aa12.84□□□□□ -0.35
PHRF1-203ENST00000416188 TMEM155Q4W5P6 130 aa12.84□□□□□ -0.35
PHRF1-203ENST00000416188 TCF23Q7RTU1 214 aa12.84□□□□□ -0.35
PHRF1-203ENST00000416188 SCGB3A1Q96QR1 104 aa12.84□□□□□ -0.35
PHRF1-203ENST00000416188 WFDC1Q9HC57 220 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms