RNA–Protein interactions for RNA: ENST00000414978.5

MCF2-204, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MCF2, Length 3,813 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-204ENST00000414978 DSCR4P56555 118 aaPredicted RBP1.8□□□□□ -2.12
MCF2-204ENST00000414978 FABP5Q01469 135 aa1.8□□□□□ -2.12
MCF2-204ENST00000414978 KRTAP27-1Q3LI81 207 aa1.8□□□□□ -2.12
MCF2-204ENST00000414978 TCTEX1D4Q5JR98 221 aa1.8□□□□□ -2.12
MCF2-204ENST00000414978 FAM231DQ6ZW35 169 aa1.8□□□□□ -2.12
MCF2-204ENST00000414978 STX12Q86Y82 276 aa1.8□□□□□ -2.12
MCF2-204ENST00000414978 OR6V1Q8N148 313 aa1.8□□□□□ -2.12
MCF2-204ENST00000414978 C3orf56Q8N813 242 aa1.8□□□□□ -2.12
MCF2-204ENST00000414978 WDSUB1Q8N9V3 476 aa1.8□□□□□ -2.12
MCF2-204ENST00000414978 OR1P1Q8NH06 330 aa1.8□□□□□ -2.12
MCF2-204ENST00000414978 OR4S2Q8NH73 311 aa1.8□□□□□ -2.12
MCF2-204ENST00000414978 NEK7Q8TDX7 302 aa1.8□□□□□ -2.12
MCF2-204ENST00000414978 C10orf105Q8TEF2 133 aa1.8□□□□□ -2.12
MCF2-204ENST00000414978 C7orf33Q8WU49 177 aa1.8□□□□□ -2.12
MCF2-204ENST00000414978 GPR82Q96P67 336 aa1.8□□□□□ -2.12
MCF2-204ENST00000414978 PECRQ9BY49 303 aa1.8□□□□□ -2.12
MCF2-204ENST00000414978 ZNF391Q9UJN7 358 aa1.8□□□□□ -2.12
MCF2-204ENST00000414978 CARHSP1Q9Y2V2 147 aaKnown RBP1.8□□□□□ -2.12
MCF2-204ENST00000414978 HDGFL3Q9Y3E1 203 aa1.8□□□□□ -2.12
MCF2-204ENST00000414978 TMEM14AQ9Y6G1 99 aa1.8□□□□□ -2.12
MCF2-204ENST00000414978 SACSQ9NZJ4 4579 aa1.8□□□□□ -2.12
MCF2-204ENST00000414978 KMT2CQ8NEZ4 4911 aaKnown RBP1.79□□□□□ -2.12
MCF2-204ENST00000414978 NBEAL1Q6ZS30 2694 aa1.79□□□□□ -2.12
MCF2-204ENST00000414978 J3QRK9 145 aa1.79□□□□□ -2.12
MCF2-204ENST00000414978 CXorf1O96002 111 aa1.79□□□□□ -2.12
MCF2-204ENST00000414978 IGHMP01871 453 aa1.79□□□□□ -2.12
MCF2-204ENST00000414978 HLA-DQB1P01920 261 aa1.79□□□□□ -2.12
MCF2-204ENST00000414978 RCC1P18754 421 aaPredicted RBP1.79□□□□□ -2.12
MCF2-204ENST00000414978 SDC2P34741 201 aa1.79□□□□□ -2.12
MCF2-204ENST00000414978 LGALS7P47929 136 aa1.79□□□□□ -2.12
MCF2-204ENST00000414978 HNRNPA0Q13151 305 aaKnown RBP1.79□□□□□ -2.12
MCF2-204ENST00000414978 JOSD1Q15040 202 aaPredicted RBP1.79□□□□□ -2.12
MCF2-204ENST00000414978 AKIRIN2Q53H80 203 aa1.79□□□□□ -2.12
MCF2-204ENST00000414978 LCE3BQ5TA77 95 aa1.79□□□□□ -2.12
MCF2-204ENST00000414978 RPL22L1Q6P5R6 122 aaKnown RBP1.79□□□□□ -2.12
MCF2-204ENST00000414978 LINC00596Q86U02 117 aa1.79□□□□□ -2.12
MCF2-204ENST00000414978 YIPF7Q8N8F6 280 aa1.79□□□□□ -2.12
MCF2-204ENST00000414978 OR4M1Q8NGD0 313 aa1.79□□□□□ -2.12
MCF2-204ENST00000414978 OR1S1Q8NH92 325 aa1.79□□□□□ -2.12
MCF2-204ENST00000414978 THEM6Q8WUY1 208 aa1.79□□□□□ -2.12
MCF2-204ENST00000414978 KCNS1Q96KK3 526 aa1.79□□□□□ -2.12
MCF2-204ENST00000414978 WFIKKN1Q96NZ8 548 aa1.79□□□□□ -2.12
MCF2-204ENST00000414978 SH3GL3Q99963 347 aa1.79□□□□□ -2.12
MCF2-204ENST00000414978 MED18Q9BUE0 208 aa1.79□□□□□ -2.12
MCF2-204ENST00000414978 SUCNR1Q9BXA5 334 aa1.79□□□□□ -2.12
MCF2-204ENST00000414978 CA10Q9NS85 328 aa1.79□□□□□ -2.12
MCF2-204ENST00000414978 NUFIP1Q9UHK0 495 aaKnown RBP1.79□□□□□ -2.12
MCF2-204ENST00000414978 BOKQ9UMX3 212 aaPredicted RBP1.79□□□□□ -2.12
MCF2-204ENST00000414978 DCHS2Q6V1P9 2916 aa1.79□□□□□ -2.12
MCF2-204ENST00000414978 LCE6AA0A183 80 aa1.79□□□□□ -2.12
MCF2-204ENST00000414978 LINC00587B1AMM8 73 aa1.79□□□□□ -2.12
MCF2-204ENST00000414978 SLC31A2O15432 143 aa1.79□□□□□ -2.12
MCF2-204ENST00000414978 ARPC5O15511 151 aa1.79□□□□□ -2.12
MCF2-204ENST00000414978 EIF1BO60739 113 aaKnown RBP1.79□□□□□ -2.12
MCF2-204ENST00000414978 SS18L1O75177 396 aaPredicted RBP1.79□□□□□ -2.12
MCF2-204ENST00000414978 PGLYRP1O75594 196 aaPredicted RBP1.79□□□□□ -2.12
MCF2-204ENST00000414978 GATBO75879 557 aaKnown RBP1.79□□□□□ -2.12
MCF2-204ENST00000414978 SULT1C4O75897 302 aa1.79□□□□□ -2.12
MCF2-204ENST00000414978 OR2A4O95047 310 aa1.79□□□□□ -2.12
MCF2-204ENST00000414978 CTLA4P16410 223 aa1.79□□□□□ -2.12
MCF2-204ENST00000414978 ZNF823P16415 610 aa1.79□□□□□ -2.12
MCF2-204ENST00000414978 RPL12P30050 165 aaKnown RBP1.79□□□□□ -2.12
MCF2-204ENST00000414978 AP2S1P53680 142 aaPredicted RBP1.79□□□□□ -2.12
MCF2-204ENST00000414978 NDPQ00604 133 aa1.79□□□□□ -2.12
MCF2-204ENST00000414978 MEF2CQ06413 473 aaPredicted RBP1.79□□□□□ -2.12
MCF2-204ENST00000414978 CCDC58Q4VC31 144 aa1.79□□□□□ -2.12
MCF2-204ENST00000414978 LINC01590Q5TEZ4 76 aa1.79□□□□□ -2.12
MCF2-204ENST00000414978 TMPPEQ6ZT21 453 aa1.79□□□□□ -2.12
MCF2-204ENST00000414978 RPRMLQ8N4K4 120 aa1.79□□□□□ -2.12
MCF2-204ENST00000414978 OR2M7Q8NG81 312 aa1.79□□□□□ -2.12
MCF2-204ENST00000414978 STOML3Q8TAV4 291 aa1.79□□□□□ -2.12
MCF2-204ENST00000414978 ASB17Q8WXJ9 295 aa1.79□□□□□ -2.12
MCF2-204ENST00000414978 ASB13Q8WXK3 278 aa1.79□□□□□ -2.12
MCF2-204ENST00000414978 SLC25A46Q96AG3 418 aa1.79□□□□□ -2.12
MCF2-204ENST00000414978 OR2A7Q96R45 310 aa1.79□□□□□ -2.12
MCF2-204ENST00000414978 POLR1DQ9Y2S0 133 aa1.79□□□□□ -2.12
MCF2-204ENST00000414978 CCDC168Q8NDH2 2452 aa1.79□□□□□ -2.12
MCF2-204ENST00000414978 COL6A5A8TX70 2615 aa1.79□□□□□ -2.12
MCF2-204ENST00000414978 ATRQ13535 2644 aa1.79□□□□□ -2.12
MCF2-204ENST00000414978 A0A0G2JMM0 328 aa1.79□□□□□ -2.12
MCF2-204ENST00000414978 LOC389332A0A1B0GUA5 103 aa1.79□□□□□ -2.12
MCF2-204ENST00000414978 A0A1W2PPB8 328 aa1.79□□□□□ -2.12
MCF2-204ENST00000414978 A0A1W2PRS3 328 aa1.79□□□□□ -2.12
MCF2-204ENST00000414978 KIR3DP1A8MWS1 328 aa1.79□□□□□ -2.12
MCF2-204ENST00000414978 TMEM250H0YL14 139 aa1.79□□□□□ -2.12
MCF2-204ENST00000414978 IGLV2-23P01705 113 aa1.79□□□□□ -2.12
MCF2-204ENST00000414978 P0C879 139 aa1.79□□□□□ -2.12
MCF2-204ENST00000414978 ALOX5APP20292 161 aa1.79□□□□□ -2.12
MCF2-204ENST00000414978 GUCA1AP43080 201 aaPredicted RBP1.79□□□□□ -2.12
MCF2-204ENST00000414978 ZNF133P52736 654 aaPredicted RBP1.79□□□□□ -2.12
MCF2-204ENST00000414978 CEBPGP53567 150 aa1.79□□□□□ -2.12
MCF2-204ENST00000414978 PLGLB1Q02325 96 aa1.79□□□□□ -2.12
MCF2-204ENST00000414978 DAZ2Q13117 558 aaKnown RBP1.79□□□□□ -2.12
MCF2-204ENST00000414978 INSL4Q14641 139 aa1.79□□□□□ -2.12
MCF2-204ENST00000414978 CDK5R1Q15078 307 aa1.79□□□□□ -2.12
MCF2-204ENST00000414978 SLC9A3R2Q15599 337 aa1.79□□□□□ -2.12
MCF2-204ENST00000414978 RNF212Q495C1 297 aa1.79□□□□□ -2.12
MCF2-204ENST00000414978 HIGD2BQ4VC39 106 aa1.79□□□□□ -2.12
MCF2-204ENST00000414978 ZNF774Q6NX45 483 aa1.79□□□□□ -2.12
MCF2-204ENST00000414978 FAM19A3Q7Z5A8 133 aa1.79□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 96.5 ms