RNA–Protein interactions for RNA: ENST00000413574.6

CSNK1E-206, Transcript of casein kinase 1 epsilon, humanhuman

TSL 5 BASIC

Gene CSNK1E, Length 1,631 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-206ENST00000413574 EDN2P20800 178 aa23.33■■□□□ 1.33
CSNK1E-206ENST00000413574 FAM106AQ4KMX7 169 aa23.33■■□□□ 1.33
CSNK1E-206ENST00000413574 TMEM217Q8N7C4 229 aa23.33■■□□□ 1.33
CSNK1E-206ENST00000413574 OR9G4Q8NGQ1 327 aa23.33■■□□□ 1.33
CSNK1E-206ENST00000413574 PET100P0DJ07 73 aa23.33■■□□□ 1.32
CSNK1E-206ENST00000413574 P2RY1P47900 373 aa23.33■■□□□ 1.32
CSNK1E-206ENST00000413574 OXLD1Q5BKU9 147 aa23.33■■□□□ 1.32
CSNK1E-206ENST00000413574 RCC1LQ96I51 464 aaKnown RBP23.33■■□□□ 1.32
CSNK1E-206ENST00000413574 SEC14L6B5MCN3 397 aa23.32■■□□□ 1.32
CSNK1E-206ENST00000413574 IGKV1OR2-108A0A075B7D4 117 aa23.31■■□□□ 1.32
CSNK1E-206ENST00000413574 SMCO3A2RU48 225 aa23.31■■□□□ 1.32
CSNK1E-206ENST00000413574 SULT1A1P50225 295 aa23.31■■□□□ 1.32
CSNK1E-206ENST00000413574 RELQ04864 619 aaPredicted RBP23.31■■□□□ 1.32
CSNK1E-206ENST00000413574 IL34Q6ZMJ4 242 aa23.31■■□□□ 1.32
CSNK1E-206ENST00000413574 hCG_2014768A0A024R1R8 64 aa23.3■■□□□ 1.32
CSNK1E-206ENST00000413574 IGKV1D-37A0A075B6S9 117 aa23.3■■□□□ 1.32
CSNK1E-206ENST00000413574 TRAV30A0A087WSZ9 112 aa23.3■■□□□ 1.32
CSNK1E-206ENST00000413574 NDUFA4O00483 81 aa23.3■■□□□ 1.32
CSNK1E-206ENST00000413574 YIF1AO95070 293 aa23.3■■□□□ 1.32
CSNK1E-206ENST00000413574 RAP2BP61225 183 aa23.3■■□□□ 1.32
CSNK1E-206ENST00000413574 REC114Q7Z4M0 266 aa23.3■■□□□ 1.32
CSNK1E-206ENST00000413574 OR1S2Q8NGQ3 325 aa23.3■■□□□ 1.32
CSNK1E-206ENST00000413574 LGALS9O00182 355 aa23.3■■□□□ 1.32
CSNK1E-206ENST00000413574 DLK1P80370 383 aa23.3■■□□□ 1.32
CSNK1E-206ENST00000413574 NHLH2Q02577 135 aa23.3■■□□□ 1.32
CSNK1E-206ENST00000413574 AKR1C1Q04828 323 aa23.3■■□□□ 1.32
CSNK1E-206ENST00000413574 SLC38A11Q08AI6 406 aa23.3■■□□□ 1.32
CSNK1E-206ENST00000413574 TM4SF20Q53R12 229 aa23.3■■□□□ 1.32
CSNK1E-206ENST00000413574 STX12Q86Y82 276 aa23.3■■□□□ 1.32
CSNK1E-206ENST00000413574 ASB13Q8WXK3 278 aa23.3■■□□□ 1.32
CSNK1E-206ENST00000413574 TMEM190Q8WZ59 177 aa23.3■■□□□ 1.32
CSNK1E-206ENST00000413574 C20orf24Q9BUV8 137 aa23.3■■□□□ 1.32
CSNK1E-206ENST00000413574 ZFP92A6NM28 416 aa23.29■■□□□ 1.32
CSNK1E-206ENST00000413574 G3V4G9 280 aa23.29■■□□□ 1.32
CSNK1E-206ENST00000413574 EWSR1Q01844 656 aaKnown RBP eCLIP23.29■■□□□ 1.32
CSNK1E-206ENST00000413574 ZNF600Q6ZNG1 722 aa23.29■■□□□ 1.32
CSNK1E-206ENST00000413574 OR2T35Q8NGX2 323 aa23.29■■□□□ 1.32
CSNK1E-206ENST00000413574 THAP6Q8TBB0 222 aa23.29■■□□□ 1.32
CSNK1E-206ENST00000413574 PUS1Q9Y606 427 aaKnown RBP eCLIP23.29■■□□□ 1.32
CSNK1E-206ENST00000413574 NBEAL1Q6ZS30 2694 aa23.28■■□□□ 1.32
CSNK1E-206ENST00000413574 ZNF207O43670 478 aaKnown RBP23.28■■□□□ 1.32
CSNK1E-206ENST00000413574 LYL1P12980 280 aa23.28■■□□□ 1.32
CSNK1E-206ENST00000413574 ZNF90Q03938 601 aa23.28■■□□□ 1.32
CSNK1E-206ENST00000413574 TOMM20LQ6UXN7 152 aa23.28■■□□□ 1.32
CSNK1E-206ENST00000413574 SAP30O75446 220 aa23.27■■□□□ 1.32
CSNK1E-206ENST00000413574 CSN3P07498 182 aa23.27■■□□□ 1.32
CSNK1E-206ENST00000413574 THAP8Q8NA92 274 aa23.27■■□□□ 1.32
CSNK1E-206ENST00000413574 MCRIP2Q9BUT9 160 aaKnown RBP23.27■■□□□ 1.32
CSNK1E-206ENST00000413574 SLC25A31Q9H0C2 315 aa23.27■■□□□ 1.32
CSNK1E-206ENST00000413574 PEMTQ9UBM1 199 aa23.27■■□□□ 1.32
CSNK1E-206ENST00000413574 TMEM213A2RRL7 107 aa23.26■■□□□ 1.31
CSNK1E-206ENST00000413574 SCGB2A1O75556 95 aa23.26■■□□□ 1.31
CSNK1E-206ENST00000413574 ADAMTSL5Q6ZMM2 481 aa23.26■■□□□ 1.31
CSNK1E-206ENST00000413574 ELOVL1Q9BW60 279 aa23.26■■□□□ 1.31
CSNK1E-206ENST00000413574 A0A1B0GVG6 124 aa23.26■■□□□ 1.31
CSNK1E-206ENST00000413574 C2orf70A6NJV1 201 aa23.26■■□□□ 1.31
CSNK1E-206ENST00000413574 ZFAND3Q9H8U3 227 aa23.26■■□□□ 1.31
CSNK1E-206ENST00000413574 A8MWP6 167 aa23.25■■□□□ 1.31
CSNK1E-206ENST00000413574 G3V3Q6 166 aa23.25■■□□□ 1.31
CSNK1E-206ENST00000413574 SMLR1H3BR10 107 aa23.25■■□□□ 1.31
CSNK1E-206ENST00000413574 YPEL3P61236 119 aaPredicted RBP23.25■■□□□ 1.31
CSNK1E-206ENST00000413574 FGL1Q08830 312 aa23.25■■□□□ 1.31
CSNK1E-206ENST00000413574 TMEM144Q7Z5S9 345 aa23.25■■□□□ 1.31
CSNK1E-206ENST00000413574 GGACTQ9BVM4 153 aa23.25■■□□□ 1.31
CSNK1E-206ENST00000413574 SELENOKQ9Y6D0 94 aa23.25■■□□□ 1.31
CSNK1E-206ENST00000413574 C9orf66Q5T8R8 295 aa23.24■■□□□ 1.31
CSNK1E-206ENST00000413574 LILRB2Q8N423 598 aa23.24■■□□□ 1.31
CSNK1E-206ENST00000413574 NPVFQ9HCQ7 196 aa23.24■■□□□ 1.31
CSNK1E-206ENST00000413574 UFC1Q9Y3C8 167 aa23.24■■□□□ 1.31
CSNK1E-206ENST00000413574 PSG1P11464 419 aa23.23■■□□□ 1.31
CSNK1E-206ENST00000413574 RPL12P30050 165 aaKnown RBP23.23■■□□□ 1.31
CSNK1E-206ENST00000413574 S100A11P31949 105 aa23.23■■□□□ 1.31
CSNK1E-206ENST00000413574 HBG1P69891 147 aa23.23■■□□□ 1.31
CSNK1E-206ENST00000413574 HBG2P69892 147 aa23.23■■□□□ 1.31
CSNK1E-206ENST00000413574 SAMD5Q5TGI4 173 aa23.23■■□□□ 1.31
CSNK1E-206ENST00000413574 NOTCH1P46531 2555 aa23.23■■□□□ 1.31
CSNK1E-206ENST00000413574 FNDC10F2Z333 226 aa23.22■■□□□ 1.31
CSNK1E-206ENST00000413574 RD3LP0DJH9 198 aa23.22■■□□□ 1.31
CSNK1E-206ENST00000413574 FOLR2P14207 255 aa23.22■■□□□ 1.31
CSNK1E-206ENST00000413574 OR2F1Q13607 317 aa23.22■■□□□ 1.31
CSNK1E-206ENST00000413574 OR5C1Q8NGR4 320 aa23.22■■□□□ 1.31
CSNK1E-206ENST00000413574 Q8WTZ3 238 aa23.22■■□□□ 1.31
CSNK1E-206ENST00000413574 TRGV9Q99603 122 aa23.22■■□□□ 1.31
CSNK1E-206ENST00000413574 TOMM40O96008 361 aa23.22■■□□□ 1.31
CSNK1E-206ENST00000413574 CBLN1P23435 193 aa23.22■■□□□ 1.31
CSNK1E-206ENST00000413574 DAZ1Q9NQZ3 744 aaKnown RBP23.22■■□□□ 1.31
CSNK1E-206ENST00000413574 SCAF4O95104 1147 aaKnown RBP23.21■■□□□ 1.31
CSNK1E-206ENST00000413574 BAXQ07812 192 aa23.21■■□□□ 1.31
CSNK1E-206ENST00000413574 TMEM182Q6ZP80 229 aaPredicted RBP23.21■■□□□ 1.31
CSNK1E-206ENST00000413574 UQCC1Q9NVA1 299 aa23.21■■□□□ 1.31
CSNK1E-206ENST00000413574 GATA2P23769 480 aaPredicted RBP23.2■■□□□ 1.3
CSNK1E-206ENST00000413574 HSPB11Q9Y547 144 aa23.2■■□□□ 1.3
CSNK1E-206ENST00000413574 IGHV3-49A0A0A0MS15 119 aa23.19■■□□□ 1.3
CSNK1E-206ENST00000413574 ELLP55199 621 aaPredicted RBP23.19■■□□□ 1.3
CSNK1E-206ENST00000413574 CLINT1Q14677 625 aa23.19■■□□□ 1.3
CSNK1E-206ENST00000413574 TEPPQ6URK8 271 aa23.19■■□□□ 1.3
CSNK1E-206ENST00000413574 TMEM147Q9BVK8 224 aa23.19■■□□□ 1.3
CSNK1E-206ENST00000413574 FXYD6-FXYD2A0A087WZ82 144 aa23.19■■□□□ 1.3
CSNK1E-206ENST00000413574 UBE2L5PA0A1B0GUS4 154 aa23.19■■□□□ 1.3
CSNK1E-206ENST00000413574 IL4P05112 153 aa23.19■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms