RNA–Protein interactions for RNA: ENST00000413374.1

NCKIPSD-202, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 725 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-202ENST00000413374 SFT2D2O95562 160 aa7.54□□□□□ -1.2
NCKIPSD-202ENST00000413374 IFNA4P05014 189 aa7.54□□□□□ -1.2
NCKIPSD-202ENST00000413374 IGLC1P0CG04 106 aa7.54□□□□□ -1.2
NCKIPSD-202ENST00000413374 OR10J1P30954 320 aa7.54□□□□□ -1.2
NCKIPSD-202ENST00000413374 SRPXP78539 464 aa7.54□□□□□ -1.2
NCKIPSD-202ENST00000413374 LEMD1Q68G75 181 aa7.54□□□□□ -1.2
NCKIPSD-202ENST00000413374 CENPSQ8N2Z9 138 aa7.54□□□□□ -1.2
NCKIPSD-202ENST00000413374 FAM24BQ8N5W8 94 aa7.54□□□□□ -1.2
NCKIPSD-202ENST00000413374 RNASEH2CQ8TDP1 164 aaKnown RBP7.54□□□□□ -1.2
NCKIPSD-202ENST00000413374 METTL26Q96S19 204 aa7.54□□□□□ -1.2
NCKIPSD-202ENST00000413374 SLC25A21Q9BQT8 299 aaPredicted RBP7.54□□□□□ -1.2
NCKIPSD-202ENST00000413374 MAGT1Q9H0U3 335 aa7.54□□□□□ -1.2
NCKIPSD-202ENST00000413374 MS4A6AQ9H2W1 248 aa7.54□□□□□ -1.2
NCKIPSD-202ENST00000413374 VSIRQ9H7M9 311 aa7.54□□□□□ -1.2
NCKIPSD-202ENST00000413374 HSPB7Q9UBY9 170 aa7.54□□□□□ -1.2
NCKIPSD-202ENST00000413374 RABAC1Q9UI14 185 aa7.54□□□□□ -1.2
NCKIPSD-202ENST00000413374 STARD9Q9P2P6 4700 aa7.54□□□□□ -1.2
NCKIPSD-202ENST00000413374 SACSQ9NZJ4 4579 aa7.53□□□□□ -1.2
NCKIPSD-202ENST00000413374 SCGB2A1O75556 95 aa7.53□□□□□ -1.2
NCKIPSD-202ENST00000413374 SLC25A4P12235 298 aa7.53□□□□□ -1.2
NCKIPSD-202ENST00000413374 BMI1P35226 326 aa7.53□□□□□ -1.2
NCKIPSD-202ENST00000413374 APOC4P55056 127 aa7.53□□□□□ -1.2
NCKIPSD-202ENST00000413374 DEFB131AP59861 70 aa7.53□□□□□ -1.2
NCKIPSD-202ENST00000413374 DEFB135Q30KP9 77 aa7.53□□□□□ -1.2
NCKIPSD-202ENST00000413374 ETFRF1Q6IPR1 90 aa7.53□□□□□ -1.2
NCKIPSD-202ENST00000413374 NOXA1Q86UR1 476 aa7.53□□□□□ -1.2
NCKIPSD-202ENST00000413374 STPG3Q8N7X2 389 aa7.53□□□□□ -1.2
NCKIPSD-202ENST00000413374 OR1S2Q8NGQ3 325 aa7.53□□□□□ -1.2
NCKIPSD-202ENST00000413374 SDHCQ99643 169 aaPredicted RBP7.53□□□□□ -1.2
NCKIPSD-202ENST00000413374 MAP6D1Q9H9H5 199 aa7.53□□□□□ -1.2
NCKIPSD-202ENST00000413374 U3KQ87 197 aa7.53□□□□□ -1.2
NCKIPSD-202ENST00000413374 DYNC2H1Q8NCM8 4307 aaKnown RBP7.53□□□□□ -1.2
NCKIPSD-202ENST00000413374 A0A1W2PS18 150 aa7.52□□□□□ -1.21
NCKIPSD-202ENST00000413374 WRBO00258 174 aa7.52□□□□□ -1.21
NCKIPSD-202ENST00000413374 SPRY2O43597 315 aa7.52□□□□□ -1.21
NCKIPSD-202ENST00000413374 ADAP1O75689 374 aa7.52□□□□□ -1.21
NCKIPSD-202ENST00000413374 IL4P05112 153 aa7.52□□□□□ -1.21
NCKIPSD-202ENST00000413374 RD3LP0DJH9 198 aa7.52□□□□□ -1.21
NCKIPSD-202ENST00000413374 P2RY1P47900 373 aa7.52□□□□□ -1.21
NCKIPSD-202ENST00000413374 GGNBP1Q5YKI7 109 aa7.52□□□□□ -1.21
NCKIPSD-202ENST00000413374 STXBP6Q8NFX7 210 aa7.52□□□□□ -1.21
NCKIPSD-202ENST00000413374 NARS2Q96I59 477 aaKnown RBP7.52□□□□□ -1.21
NCKIPSD-202ENST00000413374 TMEM231Q9H6L2 316 aa7.52□□□□□ -1.21
NCKIPSD-202ENST00000413374 CACFD1Q9UGQ2 172 aa7.52□□□□□ -1.21
NCKIPSD-202ENST00000413374 RYR2Q92736 4967 aa7.52□□□□□ -1.21
NCKIPSD-202ENST00000413374 TENM3Q9P273 2699 aa7.52□□□□□ -1.21
NCKIPSD-202ENST00000413374 A0A0J9YWU9 116 aa7.51□□□□□ -1.21
NCKIPSD-202ENST00000413374 C9orf170A2RU37 121 aa7.51□□□□□ -1.21
NCKIPSD-202ENST00000413374 MPTX1A8MV57 137 aa7.51□□□□□ -1.21
NCKIPSD-202ENST00000413374 PITX3O75364 302 aa7.51□□□□□ -1.21
NCKIPSD-202ENST00000413374 NDUFB6O95139 128 aa7.51□□□□□ -1.21
NCKIPSD-202ENST00000413374 HNRNPCP07910 306 aaKnown RBP eCLIP7.51□□□□□ -1.21
NCKIPSD-202ENST00000413374 ANXA7P20073 488 aaKnown RBP7.51□□□□□ -1.21
NCKIPSD-202ENST00000413374 CRYBB3P26998 211 aa7.51□□□□□ -1.21
NCKIPSD-202ENST00000413374 CMC4P56277 68 aaPredicted RBP7.51□□□□□ -1.21
NCKIPSD-202ENST00000413374 YPEL3P61236 119 aaPredicted RBP7.51□□□□□ -1.21
NCKIPSD-202ENST00000413374 GAMTQ14353 236 aa7.51□□□□□ -1.21
NCKIPSD-202ENST00000413374 USF2Q15853 346 aaPredicted RBP7.51□□□□□ -1.21
NCKIPSD-202ENST00000413374 GSG1LQ6UXU4 331 aa7.51□□□□□ -1.21
NCKIPSD-202ENST00000413374 LRTM2Q8N967 370 aa7.51□□□□□ -1.21
NCKIPSD-202ENST00000413374 OR51G1Q8NGK1 321 aa7.51□□□□□ -1.21
NCKIPSD-202ENST00000413374 PBDC1Q9BVG4 233 aa7.51□□□□□ -1.21
NCKIPSD-202ENST00000413374 CSTL1Q9H114 145 aa7.51□□□□□ -1.21
NCKIPSD-202ENST00000413374 TMED3Q9Y3Q3 217 aa7.51□□□□□ -1.21
NCKIPSD-202ENST00000413374 DUXBA0A1W2PPF3 345 aa7.5□□□□□ -1.21
NCKIPSD-202ENST00000413374 NAP1L6A6NFF2 107 aa7.5□□□□□ -1.21
NCKIPSD-202ENST00000413374 ZFP92A6NM28 416 aa7.5□□□□□ -1.21
NCKIPSD-202ENST00000413374 KNCNA6PVL3 124 aa7.5□□□□□ -1.21
NCKIPSD-202ENST00000413374 CENPXA8MT69 81 aa7.5□□□□□ -1.21
NCKIPSD-202ENST00000413374 TOMM40O96008 361 aa7.5□□□□□ -1.21
NCKIPSD-202ENST00000413374 CD5P06127 495 aa7.5□□□□□ -1.21
NCKIPSD-202ENST00000413374 OR4E1P0C645 316 aa7.5□□□□□ -1.21
NCKIPSD-202ENST00000413374 ZNF688P0C7X2 276 aa7.5□□□□□ -1.21
NCKIPSD-202ENST00000413374 PSG1P11464 419 aa7.5□□□□□ -1.21
NCKIPSD-202ENST00000413374 IL7P13232 177 aa7.5□□□□□ -1.21
NCKIPSD-202ENST00000413374 RAB11AP62491 216 aa7.5□□□□□ -1.21
NCKIPSD-202ENST00000413374 EWSR1Q01844 656 aaKnown RBP eCLIP7.5□□□□□ -1.21
NCKIPSD-202ENST00000413374 ZNF90Q03938 601 aa7.5□□□□□ -1.21
NCKIPSD-202ENST00000413374 DHRS2Q13268 280 aa7.5□□□□□ -1.21
NCKIPSD-202ENST00000413374 OR2F1Q13607 317 aa7.5□□□□□ -1.21
NCKIPSD-202ENST00000413374 C4orf46Q504U0 113 aa7.5□□□□□ -1.21
NCKIPSD-202ENST00000413374 SPANXN5Q5MJ07 72 aa7.5□□□□□ -1.21
NCKIPSD-202ENST00000413374 Q6ZWC4 215 aa7.5□□□□□ -1.21
NCKIPSD-202ENST00000413374 DEDD2Q8WXF8 326 aa7.5□□□□□ -1.21
NCKIPSD-202ENST00000413374 GRAMD2BQ96HH9 432 aa7.5□□□□□ -1.21
NCKIPSD-202ENST00000413374 SLC35E1Q96K37 410 aa7.5□□□□□ -1.21
NCKIPSD-202ENST00000413374 IGKV1D-37A0A075B6S9 117 aa7.49□□□□□ -1.21
NCKIPSD-202ENST00000413374 KIR2DL5BA0A0G2JN68 375 aa7.49□□□□□ -1.21
NCKIPSD-202ENST00000413374 KIR2DL5BA0A0G2JPC4 375 aa7.49□□□□□ -1.21
NCKIPSD-202ENST00000413374 H3BP45 60 aa7.49□□□□□ -1.21
NCKIPSD-202ENST00000413374 UBE2CO00762 179 aa7.49□□□□□ -1.21
NCKIPSD-202ENST00000413374 SYNGR2O43760 224 aa7.49□□□□□ -1.21
NCKIPSD-202ENST00000413374 MED6O75586 246 aa7.49□□□□□ -1.21
NCKIPSD-202ENST00000413374 BTCP35070 178 aa7.49□□□□□ -1.21
NCKIPSD-202ENST00000413374 GPX4P36969 197 aaPredicted RBP7.49□□□□□ -1.21
NCKIPSD-202ENST00000413374 UBE2MP61081 183 aaKnown RBP7.49□□□□□ -1.21
NCKIPSD-202ENST00000413374 POLR2GP62487 172 aaKnown RBP eCLIP7.49□□□□□ -1.21
NCKIPSD-202ENST00000413374 PMS2P11Q13670 270 aa7.49□□□□□ -1.21
NCKIPSD-202ENST00000413374 C16orf54Q6UWD8 224 aa7.49□□□□□ -1.21
NCKIPSD-202ENST00000413374 LYG2Q86SG7 212 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms