RNA–Protein interactions for RNA: ENST00000412272.6

HERC4-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 4,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-205ENST00000412272 FAM90A24PP0C7X0 464 aa4.24□□□□□ -1.73
HERC4-205ENST00000412272 TAS2R45P59539 299 aa4.24□□□□□ -1.73
HERC4-205ENST00000412272 CDSNQ15517 529 aa4.24□□□□□ -1.73
HERC4-205ENST00000412272 DTX2Q86UW9 622 aa4.24□□□□□ -1.73
HERC4-205ENST00000412272 MMD2Q8IY49 270 aa4.24□□□□□ -1.73
HERC4-205ENST00000412272 RPP25LQ8N5L8 163 aaKnown RBP4.24□□□□□ -1.73
HERC4-205ENST00000412272 CYYR1Q96J86 154 aa4.24□□□□□ -1.73
HERC4-205ENST00000412272 PLA2G2FQ9BZM2 168 aa4.24□□□□□ -1.73
HERC4-205ENST00000412272 CHCHD2Q9Y6H1 151 aaPredicted RBP4.24□□□□□ -1.73
HERC4-205ENST00000412272 TMEM178BH3BS89 294 aa4.24□□□□□ -1.73
HERC4-205ENST00000412272 SSSCA1O60232 199 aa4.24□□□□□ -1.73
HERC4-205ENST00000412272 MPDU1O75352 247 aa4.24□□□□□ -1.73
HERC4-205ENST00000412272 AVPP01185 164 aa4.24□□□□□ -1.73
HERC4-205ENST00000412272 ABCA11PQ4W5N1 156 aa4.24□□□□□ -1.73
HERC4-205ENST00000412272 OR13H1Q8NG92 308 aa4.24□□□□□ -1.73
HERC4-205ENST00000412272 WFDC5Q8TCV5 224 aa4.24□□□□□ -1.73
HERC4-205ENST00000412272 IGFBPL1Q8WX77 278 aa4.24□□□□□ -1.73
HERC4-205ENST00000412272 ELSPBP1Q96BH3 223 aa4.24□□□□□ -1.73
HERC4-205ENST00000412272 C9orf85Q96MD7 179 aa4.24□□□□□ -1.73
HERC4-205ENST00000412272 TPSG1Q9NRR2 321 aa4.24□□□□□ -1.73
HERC4-205ENST00000412272 MUC22E2RYF6 1773 aaPredicted RBP4.24□□□□□ -1.73
HERC4-205ENST00000412272 IGHV1-24A0A0C4DH33 117 aa4.23□□□□□ -1.73
HERC4-205ENST00000412272 H3BSH0 61 aa4.23□□□□□ -1.73
HERC4-205ENST00000412272 ARFRP1Q13795 201 aa4.23□□□□□ -1.73
HERC4-205ENST00000412272 RSPO1Q2MKA7 263 aaPredicted RBP4.23□□□□□ -1.73
HERC4-205ENST00000412272 TREML4Q6UXN2 200 aa4.23□□□□□ -1.73
HERC4-205ENST00000412272 APRG1Q8IVJ8 170 aa4.23□□□□□ -1.73
HERC4-205ENST00000412272 C10orf126Q8N4M7 172 aa4.23□□□□□ -1.73
HERC4-205ENST00000412272 OR51H1Q8NH63 302 aa4.23□□□□□ -1.73
HERC4-205ENST00000412272 Q96M66 194 aa4.23□□□□□ -1.73
HERC4-205ENST00000412272 ODF3Q96PU9 254 aa4.23□□□□□ -1.73
HERC4-205ENST00000412272 RETNQ9HD89 108 aa4.23□□□□□ -1.73
HERC4-205ENST00000412272 SLC39A9Q9NUM3 307 aa4.23□□□□□ -1.73
HERC4-205ENST00000412272 V9GYV3 84 aa4.23□□□□□ -1.73
HERC4-205ENST00000412272 SCN10AQ9Y5Y9 1956 aa4.23□□□□□ -1.73
HERC4-205ENST00000412272 PHF3Q92576 2039 aaKnown RBP4.23□□□□□ -1.73
HERC4-205ENST00000412272 FAM90A5PA8MXJ8 464 aa4.23□□□□□ -1.73
HERC4-205ENST00000412272 OVOL1O14753 267 aa4.23□□□□□ -1.73
HERC4-205ENST00000412272 AMY1AP04745 511 aa4.23□□□□□ -1.73
HERC4-205ENST00000412272 HBG1P69891 147 aa4.23□□□□□ -1.73
HERC4-205ENST00000412272 HBG2P69892 147 aa4.23□□□□□ -1.73
HERC4-205ENST00000412272 SBSPONQ8IVN8 264 aa4.23□□□□□ -1.73
HERC4-205ENST00000412272 TAF15Q92804 592 aaKnown RBP eCLIP4.23□□□□□ -1.73
HERC4-205ENST00000412272 LHFPL6Q9Y693 200 aa4.23□□□□□ -1.73
HERC4-205ENST00000412272 A0A0C4DFX4 3053 aa4.23□□□□□ -1.73
HERC4-205ENST00000412272 TMED7-TICAM2A0A0A6YYA0 188 aa4.23□□□□□ -1.73
HERC4-205ENST00000412272 J3QQQ9 107 aa4.23□□□□□ -1.73
HERC4-205ENST00000412272 UQCRQO14949 82 aa4.23□□□□□ -1.73
HERC4-205ENST00000412272 GCSHP23434 173 aa4.23□□□□□ -1.73
HERC4-205ENST00000412272 SUMF1Q8NBK3 374 aa4.23□□□□□ -1.73
HERC4-205ENST00000412272 SCAMP4Q969E2 229 aa4.23□□□□□ -1.73
HERC4-205ENST00000412272 FAM19A4Q96LR4 140 aa4.23□□□□□ -1.73
HERC4-205ENST00000412272 Q96MF0 132 aa4.23□□□□□ -1.73
HERC4-205ENST00000412272 A8MWL6 223 aa4.22□□□□□ -1.73
HERC4-205ENST00000412272 PAGE4O60829 102 aa4.22□□□□□ -1.73
HERC4-205ENST00000412272 IGHG1P01857 330 aa4.22□□□□□ -1.73
HERC4-205ENST00000412272 OR1C1Q15619 314 aa4.22□□□□□ -1.73
HERC4-205ENST00000412272 PNPLA5Q7Z6Z6 429 aaPredicted RBP4.22□□□□□ -1.73
HERC4-205ENST00000412272 BCL6BQ8N143 479 aaPredicted RBP4.22□□□□□ -1.73
HERC4-205ENST00000412272 PIP4P2Q8N4L2 257 aa4.22□□□□□ -1.73
HERC4-205ENST00000412272 NUS1Q96E22 293 aa4.22□□□□□ -1.73
HERC4-205ENST00000412272 SMIM27A0A1W2PRY6 76 aa4.22□□□□□ -1.73
HERC4-205ENST00000412272 FRG2CA6NGY1 282 aa4.22□□□□□ -1.73
HERC4-205ENST00000412272 NDUFB4O95168 129 aa4.22□□□□□ -1.73
HERC4-205ENST00000412272 SP6Q3SY56 376 aa4.22□□□□□ -1.73
HERC4-205ENST00000412272 LYSMD4Q5XG99 296 aa4.22□□□□□ -1.73
HERC4-205ENST00000412272 ANKRD37Q7Z713 158 aa4.22□□□□□ -1.73
HERC4-205ENST00000412272 POM121L12Q8N7R1 296 aa4.22□□□□□ -1.73
HERC4-205ENST00000412272 ZNF441Q8N8Z8 693 aa4.22□□□□□ -1.73
HERC4-205ENST00000412272 MBD3L2Q8NHZ7 208 aaPredicted RBP4.22□□□□□ -1.73
HERC4-205ENST00000412272 COX14Q96I36 57 aa4.22□□□□□ -1.73
HERC4-205ENST00000412272 CACNA1IQ9P0X4 2223 aa4.22□□□□□ -1.73
HERC4-205ENST00000412272 PCNX3Q9H6A9 2034 aa4.22□□□□□ -1.73
HERC4-205ENST00000412272 C11orf94C9JXX5 98 aa4.22□□□□□ -1.73
HERC4-205ENST00000412272 IGKV1D-16P01601 117 aa4.22□□□□□ -1.73
HERC4-205ENST00000412272 RRN3P1Q2M238 152 aa4.22□□□□□ -1.73
HERC4-205ENST00000412272 PHLDA2Q53GA4 152 aa4.22□□□□□ -1.73
HERC4-205ENST00000412272 MRPL14Q6P1L8 145 aaKnown RBP4.22□□□□□ -1.73
HERC4-205ENST00000412272 ZNF493Q6ZR52 646 aa4.22□□□□□ -1.73
HERC4-205ENST00000412272 GOLT1AQ6ZVE7 132 aa4.22□□□□□ -1.73
HERC4-205ENST00000412272 Q6ZVL8 140 aa4.22□□□□□ -1.73
HERC4-205ENST00000412272 SSX8Q7RTT4 187 aa4.22□□□□□ -1.73
HERC4-205ENST00000412272 NUP35Q8NFH5 326 aa4.22□□□□□ -1.73
HERC4-205ENST00000412272 CHCHD1Q96BP2 118 aaKnown RBP4.22□□□□□ -1.73
HERC4-205ENST00000412272 MLST8Q9BVC4 326 aa4.22□□□□□ -1.73
HERC4-205ENST00000412272 FGF22Q9HCT0 170 aa4.22□□□□□ -1.73
HERC4-205ENST00000412272 TMEM74BQ9NUR3 256 aa4.22□□□□□ -1.73
HERC4-205ENST00000412272 METRNQ9UJH8 293 aa4.22□□□□□ -1.73
HERC4-205ENST00000412272 Q9Y3F1 56 aa4.22□□□□□ -1.73
HERC4-205ENST00000412272 DYSFO75923 2080 aa4.22□□□□□ -1.73
HERC4-205ENST00000412272 KIF26BQ2KJY2 2108 aa4.22□□□□□ -1.73
HERC4-205ENST00000412272 SHISA9B4DS77 424 aa4.22□□□□□ -1.73
HERC4-205ENST00000412272 MS4A18H0YCH9 400 aa4.22□□□□□ -1.73
HERC4-205ENST00000412272 LEPROTL1O95214 131 aa4.22□□□□□ -1.73
HERC4-205ENST00000412272 LINC01620Q4KN68 170 aa4.22□□□□□ -1.73
HERC4-205ENST00000412272 OSTCQ9NRP0 149 aa4.22□□□□□ -1.73
HERC4-205ENST00000412272 STARD5Q9NSY2 213 aa4.22□□□□□ -1.73
HERC4-205ENST00000412272 P04436 131 aa4.21□□□□□ -1.74
HERC4-205ENST00000412272 OR5AL1P0C617 328 aa4.21□□□□□ -1.74
HERC4-205ENST00000412272 CISD3P0C7P0 127 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms