RNA–Protein interactions for RNA: ENST00000412061.3

BRCA1-204, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,312 nt, Biotype non stop decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-204ENST00000412061 RHOGP84095 191 aa2.68□□□□□ -1.98
BRCA1-204ENST00000412061 SLC38A11Q08AI6 406 aa2.68□□□□□ -1.98
BRCA1-204ENST00000412061 PLCXD2Q0VAA5 305 aa2.68□□□□□ -1.98
BRCA1-204ENST00000412061 EIF3IQ13347 325 aaKnown RBP2.68□□□□□ -1.98
BRCA1-204ENST00000412061 KRTAP25-1Q3LHN0 102 aa2.68□□□□□ -1.98
BRCA1-204ENST00000412061 DNLZQ5SXM8 178 aa2.68□□□□□ -1.98
BRCA1-204ENST00000412061 LCE3EQ5T5B0 92 aa2.68□□□□□ -1.98
BRCA1-204ENST00000412061 C1orf140Q5VVS0 124 aa2.68□□□□□ -1.98
BRCA1-204ENST00000412061 SPINT4Q6UDR6 99 aa2.68□□□□□ -1.98
BRCA1-204ENST00000412061 LYPD6Q86Y78 171 aa2.68□□□□□ -1.98
BRCA1-204ENST00000412061 OR8I2Q8N0Y5 310 aa2.68□□□□□ -1.98
BRCA1-204ENST00000412061 OR5A1Q8NGJ0 315 aa2.68□□□□□ -1.98
BRCA1-204ENST00000412061 OR4C16Q8NGL9 310 aa2.68□□□□□ -1.98
BRCA1-204ENST00000412061 CANT1Q8WVQ1 401 aa2.68□□□□□ -1.98
BRCA1-204ENST00000412061 ZC2HC1AQ96GY0 325 aa2.68□□□□□ -1.98
BRCA1-204ENST00000412061 LINC00167Q96N53 147 aa2.68□□□□□ -1.98
BRCA1-204ENST00000412061 HIST1H2BLQ99880 126 aa2.68□□□□□ -1.98
BRCA1-204ENST00000412061 KRTAP4-3Q9BYR4 195 aa2.68□□□□□ -1.98
BRCA1-204ENST00000412061 OR2H1Q9GZK4 316 aa2.68□□□□□ -1.98
BRCA1-204ENST00000412061 TPT1P8Q9HAU6 139 aa2.68□□□□□ -1.98
BRCA1-204ENST00000412061 OTORQ9NRC9 128 aa2.68□□□□□ -1.98
BRCA1-204ENST00000412061 PAIP2BQ9ULR5 123 aaKnown RBP2.68□□□□□ -1.98
BRCA1-204ENST00000412061 HEATR5AQ86XA9 2040 aa2.67□□□□□ -1.98
BRCA1-204ENST00000412061 TRPM6Q9BX84 2022 aa2.67□□□□□ -1.98
BRCA1-204ENST00000412061 OVOS2A0A0G2JMS6 1433 aa2.67□□□□□ -1.98
BRCA1-204ENST00000412061 WDR90Q96KV7 1748 aa2.67□□□□□ -1.98
BRCA1-204ENST00000412061 IGKV2D-24A0A075B6R9 120 aa2.67□□□□□ -1.98
BRCA1-204ENST00000412061 ARRDC5A6NEK1 342 aa2.67□□□□□ -1.98
BRCA1-204ENST00000412061 H3BPC8 53 aa2.67□□□□□ -1.98
BRCA1-204ENST00000412061 MSMBP08118 114 aa2.67□□□□□ -1.98
BRCA1-204ENST00000412061 LGALS3P17931 250 aaKnown RBP2.67□□□□□ -1.98
BRCA1-204ENST00000412061 CD24P25063 80 aa2.67□□□□□ -1.98
BRCA1-204ENST00000412061 SDC4P31431 198 aa2.67□□□□□ -1.98
BRCA1-204ENST00000412061 RPL28P46779 137 aaKnown RBP2.67□□□□□ -1.98
BRCA1-204ENST00000412061 PSG9Q00887 426 aa2.67□□□□□ -1.98
BRCA1-204ENST00000412061 LHFPL1Q86WI0 220 aa2.67□□□□□ -1.98
BRCA1-204ENST00000412061 MSRB3Q8IXL7 192 aa2.67□□□□□ -1.98
BRCA1-204ENST00000412061 OR2T10Q8NGZ9 312 aa2.67□□□□□ -1.98
BRCA1-204ENST00000412061 OR8B2Q96RD0 313 aa2.67□□□□□ -1.98
BRCA1-204ENST00000412061 CGREF1Q99674 301 aa2.67□□□□□ -1.98
BRCA1-204ENST00000412061 POPDC3Q9HBV1 291 aa2.67□□□□□ -1.98
BRCA1-204ENST00000412061 TXNL4BQ9NX01 149 aaKnown RBP2.67□□□□□ -1.98
BRCA1-204ENST00000412061 MED1Q15648 1581 aaPredicted RBP2.66□□□□□ -1.98
BRCA1-204ENST00000412061 GREB1Q4ZG55 1949 aa2.66□□□□□ -1.98
BRCA1-204ENST00000412061 N4BP2Q86UW6 1770 aaPredicted RBP2.66□□□□□ -1.98
BRCA1-204ENST00000412061 EML6Q6ZMW3 1958 aa2.66□□□□□ -1.98
BRCA1-204ENST00000412061 PRR14LQ5THK1 2151 aa2.66□□□□□ -1.98
BRCA1-204ENST00000412061 TMEM235A6NFC5 223 aa2.66□□□□□ -1.98
BRCA1-204ENST00000412061 C5orf58C9J3I9 102 aa2.66□□□□□ -1.98
BRCA1-204ENST00000412061 C9JAW5 83 aa2.66□□□□□ -1.98
BRCA1-204ENST00000412061 SLC22A1O15245 554 aa2.66□□□□□ -1.98
BRCA1-204ENST00000412061 TNFSF15O95150 251 aa2.66□□□□□ -1.98
BRCA1-204ENST00000412061 C1QCP02747 245 aa2.66□□□□□ -1.98
BRCA1-204ENST00000412061 CXCL1P09341 107 aa2.66□□□□□ -1.98
BRCA1-204ENST00000412061 ZNF728P0DKX0 622 aa2.66□□□□□ -1.98
BRCA1-204ENST00000412061 COL8A2P25067 703 aa2.66□□□□□ -1.98
BRCA1-204ENST00000412061 RNASE4P34096 147 aaKnown RBP2.66□□□□□ -1.98
BRCA1-204ENST00000412061 SUPT4H1P63272 117 aaKnown RBP2.66□□□□□ -1.98
BRCA1-204ENST00000412061 MSMO1Q15800 293 aa2.66□□□□□ -1.98
BRCA1-204ENST00000412061 RPL13AP3Q6NVV1 102 aa2.66□□□□□ -1.98
BRCA1-204ENST00000412061 SIGLECL1Q8N7X8 197 aa2.66□□□□□ -1.98
BRCA1-204ENST00000412061 MRPL32Q9BYC8 188 aaKnown RBP2.66□□□□□ -1.98
BRCA1-204ENST00000412061 NAT8BQ9UHF3 227 aa2.66□□□□□ -1.98
BRCA1-204ENST00000412061 HIGD1AQ9Y241 93 aa2.66□□□□□ -1.98
BRCA1-204ENST00000412061 MINOS1-NBL1R4GNA1 71 aa2.66□□□□□ -1.98
BRCA1-204ENST00000412061 SHANK3Q9BYB0 1731 aa2.65□□□□□ -1.98
BRCA1-204ENST00000412061 SPATA31E1Q6ZUB1 1445 aa2.65□□□□□ -1.98
BRCA1-204ENST00000412061 ANKRD31Q8N7Z5 1873 aa2.65□□□□□ -1.99
BRCA1-204ENST00000412061 KIF26AQ9ULI4 1882 aaPredicted RBP2.65□□□□□ -1.99
BRCA1-204ENST00000412061 CCDC171Q6TFL3 1326 aa2.65□□□□□ -1.99
BRCA1-204ENST00000412061 C11orf86A6NJI1 115 aa2.65□□□□□ -1.99
BRCA1-204ENST00000412061 C19orf84I3L1E1 186 aa2.65□□□□□ -1.99
BRCA1-204ENST00000412061 LYZL6O75951 148 aa2.65□□□□□ -1.99
BRCA1-204ENST00000412061 OR2H2O95918 312 aa2.65□□□□□ -1.99
BRCA1-204ENST00000412061 NAPSAO96009 420 aa2.65□□□□□ -1.99
BRCA1-204ENST00000412061 UCHL1P09936 223 aa2.65□□□□□ -1.99
BRCA1-204ENST00000412061 MPC1LP0DKB6 136 aa2.65□□□□□ -1.99
BRCA1-204ENST00000412061 DEFA4P12838 97 aa2.65□□□□□ -1.99
BRCA1-204ENST00000412061 DYNLT3P51808 116 aa2.65□□□□□ -1.99
BRCA1-204ENST00000412061 TMBIM6P55061 237 aa2.65□□□□□ -1.99
BRCA1-204ENST00000412061 KRTAP12-2P59991 146 aa2.65□□□□□ -1.99
BRCA1-204ENST00000412061 FOXF1Q12946 379 aa2.65□□□□□ -1.99
BRCA1-204ENST00000412061 VMA21Q3ZAQ7 101 aa2.65□□□□□ -1.99
BRCA1-204ENST00000412061 MORN2Q502X0 79 aa2.65□□□□□ -1.99
BRCA1-204ENST00000412061 TSTD1Q8NFU3 115 aa2.65□□□□□ -1.99
BRCA1-204ENST00000412061 YPEL2Q96QA6 119 aa2.65□□□□□ -1.99
BRCA1-204ENST00000412061 RNF11Q9Y3C5 154 aa2.65□□□□□ -1.99
BRCA1-204ENST00000412061 MED23Q9ULK4 1368 aa2.64□□□□□ -1.99
BRCA1-204ENST00000412061 IGLV4-60A0A075B6I1 120 aa2.64□□□□□ -1.99
BRCA1-204ENST00000412061 TRGV5A0A0B4J1U4 118 aa2.64□□□□□ -1.99
BRCA1-204ENST00000412061 TRAV5A0A0B4J249 113 aa2.64□□□□□ -1.99
BRCA1-204ENST00000412061 A0A1B0GW64 132 aa2.64□□□□□ -1.99
BRCA1-204ENST00000412061 J3QQQ9 107 aa2.64□□□□□ -1.99
BRCA1-204ENST00000412061 CST7O76096 145 aa2.64□□□□□ -1.99
BRCA1-204ENST00000412061 DPM2O94777 84 aa2.64□□□□□ -1.99
BRCA1-204ENST00000412061 FABP2P12104 132 aa2.64□□□□□ -1.99
BRCA1-204ENST00000412061 SDC2P34741 201 aa2.64□□□□□ -1.99
BRCA1-204ENST00000412061 ARPP19P56211 112 aa2.64□□□□□ -1.99
BRCA1-204ENST00000412061 KHDC3LQ587J8 217 aa2.64□□□□□ -1.99
BRCA1-204ENST00000412061 C22orf39Q6P5X5 142 aa2.64□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms