RNA–Protein interactions for RNA: ENST00000411552.5

NOD1-202, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

TSL 1 (best)

Gene NOD1, Length 794 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-202ENST00000411552 SLC16A13Q7RTY0 426 aa12.26□□□□□ -0.45
NOD1-202ENST00000411552 OR4D5Q8NGN0 318 aa12.26□□□□□ -0.45
NOD1-202ENST00000411552 NPIPB3Q92617 1050 aa12.26□□□□□ -0.45
NOD1-202ENST00000411552 CIB3Q96Q77 187 aaPredicted RBP12.26□□□□□ -0.45
NOD1-202ENST00000411552 NEURL2Q9BR09 285 aa12.26□□□□□ -0.45
NOD1-202ENST00000411552 OR10J1P30954 320 aa12.25□□□□□ -0.45
NOD1-202ENST00000411552 OR1S2Q8NGQ3 325 aa12.25□□□□□ -0.45
NOD1-202ENST00000411552 ENKURQ8TC29 256 aa12.25□□□□□ -0.45
NOD1-202ENST00000411552 ZNF431Q8TF32 576 aaPredicted RBP12.25□□□□□ -0.45
NOD1-202ENST00000411552 ACY3Q96HD9 319 aa12.25□□□□□ -0.45
NOD1-202ENST00000411552 GINS3Q9BRX5 216 aa12.25□□□□□ -0.45
NOD1-202ENST00000411552 RHPN1-AS1Q9BWJ2 59 aa12.25□□□□□ -0.45
NOD1-202ENST00000411552 C19orf73Q9NVV2 129 aa12.25□□□□□ -0.45
NOD1-202ENST00000411552 IGHV3OR16-13A0A075B7E8 117 aa12.24□□□□□ -0.45
NOD1-202ENST00000411552 IGHV3-74A0A0B4J1X5 117 aa12.24□□□□□ -0.45
NOD1-202ENST00000411552 A8MZ25 164 aa12.24□□□□□ -0.45
NOD1-202ENST00000411552 CHEK1O14757 476 aa12.24□□□□□ -0.45
NOD1-202ENST00000411552 NKX2-1P43699 371 aaPredicted RBP12.24□□□□□ -0.45
NOD1-202ENST00000411552 POLR2GP62487 172 aaKnown RBP eCLIP12.24□□□□□ -0.45
NOD1-202ENST00000411552 RAB11AP62491 216 aa12.24□□□□□ -0.45
NOD1-202ENST00000411552 IAH1Q2TAA2 248 aaPredicted RBP12.24□□□□□ -0.45
NOD1-202ENST00000411552 SBSPONQ8IVN8 264 aa12.24□□□□□ -0.45
NOD1-202ENST00000411552 RNF2Q99496 336 aa12.24□□□□□ -0.45
NOD1-202ENST00000411552 PAIP2BQ9ULR5 123 aaKnown RBP12.24□□□□□ -0.45
NOD1-202ENST00000411552 HUWE1Q7Z6Z7 4374 aaKnown RBP12.23□□□□□ -0.45
NOD1-202ENST00000411552 CCSO14618 274 aa12.23□□□□□ -0.45
NOD1-202ENST00000411552 TSPAN4O14817 238 aa12.23□□□□□ -0.45
NOD1-202ENST00000411552 SSSCA1O60232 199 aa12.23□□□□□ -0.45
NOD1-202ENST00000411552 NHLRC4P0CG21 123 aaPredicted RBP12.23□□□□□ -0.45
NOD1-202ENST00000411552 GPX4P36969 197 aaPredicted RBP12.23□□□□□ -0.45
NOD1-202ENST00000411552 YPEL3P61236 119 aaPredicted RBP12.23□□□□□ -0.45
NOD1-202ENST00000411552 RPP30P78346 268 aaKnown RBP12.23□□□□□ -0.45
NOD1-202ENST00000411552 GAMTQ14353 236 aa12.23□□□□□ -0.45
NOD1-202ENST00000411552 LAMTOR1Q6IAA8 161 aa12.23□□□□□ -0.45
NOD1-202ENST00000411552 ZBTB8BQ8NAP8 495 aaPredicted RBP12.23□□□□□ -0.45
NOD1-202ENST00000411552 SPAG8Q99932 426 aaPredicted RBP12.23□□□□□ -0.45
NOD1-202ENST00000411552 WFDC10AQ9H1F0 79 aa12.23□□□□□ -0.45
NOD1-202ENST00000411552 TUBA4BQ9H853 241 aa12.23□□□□□ -0.45
NOD1-202ENST00000411552 H3BP45 60 aa12.22□□□□□ -0.45
NOD1-202ENST00000411552 APOHP02749 345 aaPredicted RBP12.22□□□□□ -0.45
NOD1-202ENST00000411552 SPANXN5Q5MJ07 72 aa12.22□□□□□ -0.45
NOD1-202ENST00000411552 NRARPQ7Z6K4 114 aa12.22□□□□□ -0.45
NOD1-202ENST00000411552 C12orf45Q8N5I9 185 aaPredicted RBP12.22□□□□□ -0.45
NOD1-202ENST00000411552 DEFB125Q8N687 156 aa12.22□□□□□ -0.45
NOD1-202ENST00000411552 ST8SIA2Q92186 375 aa12.22□□□□□ -0.45
NOD1-202ENST00000411552 SLC35E1Q96K37 410 aa12.22□□□□□ -0.45
NOD1-202ENST00000411552 GSKIPQ9P0R6 139 aa12.22□□□□□ -0.45
NOD1-202ENST00000411552 IGHV3-66A0A0C4DH42 116 aa12.21□□□□□ -0.45
NOD1-202ENST00000411552 OR11H12B2RN74 326 aa12.21□□□□□ -0.45
NOD1-202ENST00000411552 PRSS46E5RG02 174 aa12.21□□□□□ -0.45
NOD1-202ENST00000411552 SCGB1D2O95969 90 aa12.21□□□□□ -0.45
NOD1-202ENST00000411552 NPPCP23582 126 aa12.21□□□□□ -0.45
NOD1-202ENST00000411552 Q8WTZ3 238 aa12.21□□□□□ -0.45
NOD1-202ENST00000411552 METTL26Q96S19 204 aa12.21□□□□□ -0.45
NOD1-202ENST00000411552 VSIRQ9H7M9 311 aa12.21□□□□□ -0.45
NOD1-202ENST00000411552 STRAPQ9Y3F4 350 aaKnown RBP12.21□□□□□ -0.45
NOD1-202ENST00000411552 FAM25EA8MYX2 175 aa12.2□□□□□ -0.46
NOD1-202ENST00000411552 TOMM40O96008 361 aa12.2□□□□□ -0.46
NOD1-202ENST00000411552 IL5P05113 134 aa12.2□□□□□ -0.46
NOD1-202ENST00000411552 CRYBB3P26998 211 aa12.2□□□□□ -0.46
NOD1-202ENST00000411552 BMI1P35226 326 aa12.2□□□□□ -0.46
NOD1-202ENST00000411552 FAM90A2PQ658T7 463 aa12.2□□□□□ -0.46
NOD1-202ENST00000411552 LILRB2Q8N423 598 aa12.2□□□□□ -0.46
NOD1-202ENST00000411552 SMIM8Q96KF7 97 aa12.2□□□□□ -0.46
NOD1-202ENST00000411552 SRD5A3Q9H8P0 318 aa12.2□□□□□ -0.46
NOD1-202ENST00000411552 PSENENQ9NZ42 101 aa12.2□□□□□ -0.46
NOD1-202ENST00000411552 RCL1Q9Y2P8 373 aaKnown RBP12.2□□□□□ -0.46
NOD1-202ENST00000411552 STAB2Q8WWQ8 2551 aa12.2□□□□□ -0.46
NOD1-202ENST00000411552 TENM3Q9P273 2699 aa12.19□□□□□ -0.46
NOD1-202ENST00000411552 IGKV1D-37A0A075B6S9 117 aa12.19□□□□□ -0.46
NOD1-202ENST00000411552 MBPP02686 304 aaPredicted RBP12.19□□□□□ -0.46
NOD1-202ENST00000411552 RD3LP0DJH9 198 aa12.19□□□□□ -0.46
NOD1-202ENST00000411552 PAX9P55771 341 aa12.19□□□□□ -0.46
NOD1-202ENST00000411552 DEFA1P59665 94 aa12.19□□□□□ -0.46
NOD1-202ENST00000411552 DEFA3P59666 94 aa12.19□□□□□ -0.46
NOD1-202ENST00000411552 TCF24Q7RTU0 167 aa12.19□□□□□ -0.46
NOD1-202ENST00000411552 NBEAL2Q6ZNJ1 2754 aa12.19□□□□□ -0.46
NOD1-202ENST00000411552 RBMY1BA6NDE4 496 aaKnown RBP12.18□□□□□ -0.46
NOD1-202ENST00000411552 C5orf51A6NDU8 294 aa12.18□□□□□ -0.46
NOD1-202ENST00000411552 RBMY1EA6NEQ0 496 aaKnown RBP12.18□□□□□ -0.46
NOD1-202ENST00000411552 OR4C46A6NHA9 309 aa12.18□□□□□ -0.46
NOD1-202ENST00000411552 ZFP92A6NM28 416 aa12.18□□□□□ -0.46
NOD1-202ENST00000411552 IL4P05112 153 aa12.18□□□□□ -0.46
NOD1-202ENST00000411552 RBMY1DP0C7P1 496 aaKnown RBP12.18□□□□□ -0.46
NOD1-202ENST00000411552 PSG1P11464 419 aa12.18□□□□□ -0.46
NOD1-202ENST00000411552 ZNF90Q03938 601 aa12.18□□□□□ -0.46
NOD1-202ENST00000411552 USF2Q15853 346 aaPredicted RBP12.18□□□□□ -0.46
NOD1-202ENST00000411552 RAB40CQ96S21 281 aa12.18□□□□□ -0.46
NOD1-202ENST00000411552 U3KQK5 164 aa12.18□□□□□ -0.46
NOD1-202ENST00000411552 IGKV3-7A0A075B6H7 116 aa12.17□□□□□ -0.46
NOD1-202ENST00000411552 IGKV1OR2-108A0A075B7D4 117 aa12.17□□□□□ -0.46
NOD1-202ENST00000411552 A0A1W2PS18 150 aa12.17□□□□□ -0.46
NOD1-202ENST00000411552 DFFBO76075 338 aa12.17□□□□□ -0.46
NOD1-202ENST00000411552 CD5P06127 495 aa12.17□□□□□ -0.46
NOD1-202ENST00000411552 HAGHQ16775 308 aa12.17□□□□□ -0.46
NOD1-202ENST00000411552 LINC00322Q6ZN03 302 aaPredicted RBP12.17□□□□□ -0.46
NOD1-202ENST00000411552 GBGT1Q8N5D6 347 aa12.17□□□□□ -0.46
NOD1-202ENST00000411552 THAP8Q8NA92 274 aa12.17□□□□□ -0.46
NOD1-202ENST00000411552 C2orf50Q96LR7 162 aa12.17□□□□□ -0.46
NOD1-202ENST00000411552 MARVELD1Q9BSK0 173 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms