RNA–Protein interactions for RNA: ENST00000411527.5

HLA-DQB2-229, Transcript of major histocompatibility complex, class II, DQ beta 2, humanhuman

BASIC

Gene HLA-DQB2, Length 1,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2-229ENST00000411527 APOA1P02647 267 aa10.2□□□□□ -0.78
HLA-DQB2-229ENST00000411527 EMP1P54849 157 aa10.2□□□□□ -0.78
HLA-DQB2-229ENST00000411527 DHODHQ02127 395 aa10.2□□□□□ -0.78
HLA-DQB2-229ENST00000411527 TRIM16LQ309B1 348 aa10.2□□□□□ -0.78
HLA-DQB2-229ENST00000411527 BSXQ3C1V8 233 aa10.2□□□□□ -0.78
HLA-DQB2-229ENST00000411527 UBE2DNLQ8IWF7 75 aa10.2□□□□□ -0.78
HLA-DQB2-229ENST00000411527 OR1S2Q8NGQ3 325 aa10.2□□□□□ -0.78
HLA-DQB2-229ENST00000411527 RNASE11Q8TAA1 199 aaKnown RBP10.2□□□□□ -0.78
HLA-DQB2-229ENST00000411527 RRNAD1Q96FB5 475 aaKnown RBP10.2□□□□□ -0.78
HLA-DQB2-229ENST00000411527 IGLV2-18A0A075B6J9 118 aa10.19□□□□□ -0.78
HLA-DQB2-229ENST00000411527 ATP6V1G2O95670 118 aa10.19□□□□□ -0.78
HLA-DQB2-229ENST00000411527 IGLC1P0CG04 106 aa10.19□□□□□ -0.78
HLA-DQB2-229ENST00000411527 SPART-AS1P0CW21 52 aa10.19□□□□□ -0.78
HLA-DQB2-229ENST00000411527 HTR2BP41595 481 aa10.19□□□□□ -0.78
HLA-DQB2-229ENST00000411527 RND2P52198 227 aa10.19□□□□□ -0.78
HLA-DQB2-229ENST00000411527 YPEL3P61236 119 aaPredicted RBP10.19□□□□□ -0.78
HLA-DQB2-229ENST00000411527 RNASE12Q5GAN4 147 aaKnown RBP10.19□□□□□ -0.78
HLA-DQB2-229ENST00000411527 RNASE10Q5GAN6 216 aaKnown RBP10.19□□□□□ -0.78
HLA-DQB2-229ENST00000411527 PRSS54Q6PEW0 395 aa10.19□□□□□ -0.78
HLA-DQB2-229ENST00000411527 Q6ZRM9 215 aa10.19□□□□□ -0.78
HLA-DQB2-229ENST00000411527 LHFPL1Q86WI0 220 aa10.19□□□□□ -0.78
HLA-DQB2-229ENST00000411527 YIPF6Q96EC8 236 aa10.19□□□□□ -0.78
HLA-DQB2-229ENST00000411527 HEYLQ9NQ87 328 aaPredicted RBP10.19□□□□□ -0.78
HLA-DQB2-229ENST00000411527 BATF3Q9NR55 127 aa10.19□□□□□ -0.78
HLA-DQB2-229ENST00000411527 COPZ2Q9P299 210 aa10.19□□□□□ -0.78
HLA-DQB2-229ENST00000411527 IL4P05112 153 aa10.18□□□□□ -0.78
HLA-DQB2-229ENST00000411527 ELK1P19419 428 aa10.18□□□□□ -0.78
HLA-DQB2-229ENST00000411527 OR10J1P30954 320 aa10.18□□□□□ -0.78
HLA-DQB2-229ENST00000411527 SPCS3P61009 180 aa10.18□□□□□ -0.78
HLA-DQB2-229ENST00000411527 USF2Q15853 346 aaPredicted RBP10.18□□□□□ -0.78
HLA-DQB2-229ENST00000411527 SIGLEC15Q6ZMC9 328 aa10.18□□□□□ -0.78
HLA-DQB2-229ENST00000411527 ZNF705AQ6ZN79 300 aaPredicted RBP10.18□□□□□ -0.78
HLA-DQB2-229ENST00000411527 NEU1Q99519 415 aa10.18□□□□□ -0.78
HLA-DQB2-229ENST00000411527 SEPSECSQ9HD40 501 aaKnown RBP10.18□□□□□ -0.78
HLA-DQB2-229ENST00000411527 NRN1Q9NPD7 142 aa10.18□□□□□ -0.78
HLA-DQB2-229ENST00000411527 KLK11Q9UBX7 282 aa10.18□□□□□ -0.78
HLA-DQB2-229ENST00000411527 IGHV3OR16-12A0A075B7B8 117 aa10.17□□□□□ -0.78
HLA-DQB2-229ENST00000411527 TMEM189A5PLL7 270 aa10.17□□□□□ -0.78
HLA-DQB2-229ENST00000411527 BUB3O43684 328 aa10.17□□□□□ -0.78
HLA-DQB2-229ENST00000411527 HPGDSO60760 199 aa10.17□□□□□ -0.78
HLA-DQB2-229ENST00000411527 IGKV3-20P01619 116 aa10.17□□□□□ -0.78
HLA-DQB2-229ENST00000411527 CD74P04233 296 aa10.17□□□□□ -0.78
HLA-DQB2-229ENST00000411527 CD3DP04234 171 aa10.17□□□□□ -0.78
HLA-DQB2-229ENST00000411527 SLC25A4P12235 298 aa10.17□□□□□ -0.78
HLA-DQB2-229ENST00000411527 UCP1P25874 307 aa10.17□□□□□ -0.78
HLA-DQB2-229ENST00000411527 FXYD7P58549 80 aa10.17□□□□□ -0.78
HLA-DQB2-229ENST00000411527 C2orf83Q53S99 150 aa10.17□□□□□ -0.78
HLA-DQB2-229ENST00000411527 Q6ZR54 194 aa10.17□□□□□ -0.78
HLA-DQB2-229ENST00000411527 ARRDC1Q8N5I2 433 aa10.17□□□□□ -0.78
HLA-DQB2-229ENST00000411527 CCDC71LQ8N9Z2 235 aa10.17□□□□□ -0.78
HLA-DQB2-229ENST00000411527 ZFAND1Q8TCF1 268 aa10.17□□□□□ -0.78
HLA-DQB2-229ENST00000411527 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.17□□□□□ -0.78
HLA-DQB2-229ENST00000411527 SMIM9A6NGZ8 99 aa10.16□□□□□ -0.78
HLA-DQB2-229ENST00000411527 ZNF705FA8MVS1 300 aaPredicted RBP10.16□□□□□ -0.78
HLA-DQB2-229ENST00000411527 ZNF705DP0CH99 300 aaPredicted RBP10.16□□□□□ -0.78
HLA-DQB2-229ENST00000411527 ZNF705BP0CI00 300 aaPredicted RBP10.16□□□□□ -0.78
HLA-DQB2-229ENST00000411527 HLA-DRB4P13762 266 aa10.16□□□□□ -0.78
HLA-DQB2-229ENST00000411527 NKX2-1P43699 371 aaPredicted RBP10.16□□□□□ -0.78
HLA-DQB2-229ENST00000411527 AARDQ4LEZ3 155 aa10.16□□□□□ -0.78
HLA-DQB2-229ENST00000411527 ZNF575Q86XF7 245 aa10.16□□□□□ -0.78
HLA-DQB2-229ENST00000411527 OR52E5Q8NH55 327 aa10.16□□□□□ -0.78
HLA-DQB2-229ENST00000411527 TERB2Q8NHR7 220 aa10.16□□□□□ -0.78
HLA-DQB2-229ENST00000411527 RNASEH2CQ8TDP1 164 aaKnown RBP10.16□□□□□ -0.78
HLA-DQB2-229ENST00000411527 NPIPB3Q92617 1050 aa10.16□□□□□ -0.78
HLA-DQB2-229ENST00000411527 FAM210BQ96KR6 192 aa10.16□□□□□ -0.78
HLA-DQB2-229ENST00000411527 KRTAP4-5Q9BYR2 181 aa10.16□□□□□ -0.78
HLA-DQB2-229ENST00000411527 PLA2G2EQ9NZK7 142 aa10.16□□□□□ -0.78
HLA-DQB2-229ENST00000411527 RFNGQ9Y644 331 aa10.16□□□□□ -0.78
HLA-DQB2-229ENST00000411527 HLA-DRB4X5D2U9 266 aa10.16□□□□□ -0.78
HLA-DQB2-229ENST00000411527 CEBPZOSA8MTT3 80 aa10.15□□□□□ -0.78
HLA-DQB2-229ENST00000411527 FAM25AB3EWG3 89 aa10.15□□□□□ -0.78
HLA-DQB2-229ENST00000411527 FAM25CB3EWG5 89 aa10.15□□□□□ -0.78
HLA-DQB2-229ENST00000411527 FAM25GB3EWG6 89 aa10.15□□□□□ -0.78
HLA-DQB2-229ENST00000411527 GSTZ1O43708 216 aaPredicted RBP10.15□□□□□ -0.78
HLA-DQB2-229ENST00000411527 RD3LP0DJH9 198 aa10.15□□□□□ -0.78
HLA-DQB2-229ENST00000411527 DEFB1P60022 68 aa10.15□□□□□ -0.78
HLA-DQB2-229ENST00000411527 SOHLH1Q5JUK2 328 aa10.15□□□□□ -0.78
HLA-DQB2-229ENST00000411527 GDF5OSQ5U4N7 250 aa10.15□□□□□ -0.78
HLA-DQB2-229ENST00000411527 ETFRF1Q6IPR1 90 aa10.15□□□□□ -0.78
HLA-DQB2-229ENST00000411527 FAM219AQ8IW50 185 aa10.15□□□□□ -0.78
HLA-DQB2-229ENST00000411527 SLC24A4Q8NFF2 622 aa10.15□□□□□ -0.78
HLA-DQB2-229ENST00000411527 OR13C8Q8NGS7 320 aa10.15□□□□□ -0.78
HLA-DQB2-229ENST00000411527 ACY3Q96HD9 319 aa10.15□□□□□ -0.78
HLA-DQB2-229ENST00000411527 TMEM222Q9H0R3 208 aa10.15□□□□□ -0.78
HLA-DQB2-229ENST00000411527 DKK2Q9UBU2 259 aa10.15□□□□□ -0.78
HLA-DQB2-229ENST00000411527 B3GALNT1O75752 331 aa10.14□□□□□ -0.79
HLA-DQB2-229ENST00000411527 NXPH3O95157 252 aa10.14□□□□□ -0.79
HLA-DQB2-229ENST00000411527 CDS2O95674 445 aa10.14□□□□□ -0.79
HLA-DQB2-229ENST00000411527 TOMM40O96008 361 aa10.14□□□□□ -0.79
HLA-DQB2-229ENST00000411527 HTN3P15516 51 aa10.14□□□□□ -0.79
HLA-DQB2-229ENST00000411527 NCS1P62166 190 aa10.14□□□□□ -0.79
HLA-DQB2-229ENST00000411527 RNF212Q495C1 297 aa10.14□□□□□ -0.79
HLA-DQB2-229ENST00000411527 SCGB2B2Q4G0G5 96 aa10.14□□□□□ -0.79
HLA-DQB2-229ENST00000411527 FAM222AQ5U5X8 452 aa10.14□□□□□ -0.79
HLA-DQB2-229ENST00000411527 OR4D10Q8NGI6 311 aa10.14□□□□□ -0.79
HLA-DQB2-229ENST00000411527 OR51G1Q8NGK1 321 aa10.14□□□□□ -0.79
HLA-DQB2-229ENST00000411527 OR52I2Q8NH67 350 aa10.14□□□□□ -0.79
HLA-DQB2-229ENST00000411527 MARCH1Q8TCQ1 289 aa10.14□□□□□ -0.79
HLA-DQB2-229ENST00000411527 TMEM170AQ8WVE7 144 aa10.14□□□□□ -0.79
HLA-DQB2-229ENST00000411527 LINC00052Q96N35 136 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 128.3 ms