RNA–Protein interactions for RNA: ENST00000409958.6

VSX1-204, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best)

Gene VSX1, Length 1,305 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-204ENST00000409958 ZFAND3Q9H8U3 227 aa15.59■□□□□ 0.09
VSX1-204ENST00000409958 CHEK1O14757 476 aa15.58■□□□□ 0.08
VSX1-204ENST00000409958 TSPAN4O14817 238 aa15.58■□□□□ 0.08
VSX1-204ENST00000409958 H2AFB2P0C5Z0 115 aa15.58■□□□□ 0.08
VSX1-204ENST00000409958 IGLC1P0CG04 106 aa15.58■□□□□ 0.08
VSX1-204ENST00000409958 RAB11AP62491 216 aa15.58■□□□□ 0.08
VSX1-204ENST00000409958 ID3Q02535 119 aa15.58■□□□□ 0.08
VSX1-204ENST00000409958 TIGITQ495A1 244 aa15.58■□□□□ 0.08
VSX1-204ENST00000409958 OR4D5Q8NGN0 318 aa15.58■□□□□ 0.08
VSX1-204ENST00000409958 RHPN1-AS1Q9BWJ2 59 aa15.58■□□□□ 0.08
VSX1-204ENST00000409958 OR10J1P30954 320 aa15.57■□□□□ 0.08
VSX1-204ENST00000409958 GPX4P36969 197 aaPredicted RBP15.57■□□□□ 0.08
VSX1-204ENST00000409958 RPP30P78346 268 aaKnown RBP15.57■□□□□ 0.08
VSX1-204ENST00000409958 SBSPONQ8IVN8 264 aa15.57■□□□□ 0.08
VSX1-204ENST00000409958 NPIPB3Q92617 1050 aa15.57■□□□□ 0.08
VSX1-204ENST00000409958 SPAG8Q99932 426 aaPredicted RBP15.57■□□□□ 0.08
VSX1-204ENST00000409958 TUBA4BQ9H853 241 aa15.57■□□□□ 0.08
VSX1-204ENST00000409958 WRBO00258 174 aa15.56■□□□□ 0.08
VSX1-204ENST00000409958 BMI1P35226 326 aa15.56■□□□□ 0.08
VSX1-204ENST00000409958 YPEL3P61236 119 aaPredicted RBP15.56■□□□□ 0.08
VSX1-204ENST00000409958 IFITM3Q01628 133 aa15.56■□□□□ 0.08
VSX1-204ENST00000409958 ZNF431Q8TF32 576 aaPredicted RBP15.56■□□□□ 0.08
VSX1-204ENST00000409958 ACY3Q96HD9 319 aa15.56■□□□□ 0.08
VSX1-204ENST00000409958 IGHV3-49A0A0A0MS15 119 aa15.55■□□□□ 0.08
VSX1-204ENST00000409958 NKX2-1P43699 371 aaPredicted RBP15.55■□□□□ 0.08
VSX1-204ENST00000409958 IAH1Q2TAA2 248 aaPredicted RBP15.55■□□□□ 0.08
VSX1-204ENST00000409958 RNF2Q99496 336 aa15.55■□□□□ 0.08
VSX1-204ENST00000409958 OR11H12B2RN74 326 aa15.54■□□□□ 0.08
VSX1-204ENST00000409958 POLR2GP62487 172 aaKnown RBP eCLIP15.54■□□□□ 0.08
VSX1-204ENST00000409958 ENKURQ8TC29 256 aa15.54■□□□□ 0.08
VSX1-204ENST00000409958 Q8WTZ3 238 aa15.54■□□□□ 0.08
VSX1-204ENST00000409958 SLC35E1Q96K37 410 aa15.54■□□□□ 0.08
VSX1-204ENST00000409958 SEC22CQ9BRL7 303 aa15.54■□□□□ 0.08
VSX1-204ENST00000409958 VSIRQ9H7M9 311 aa15.54■□□□□ 0.08
VSX1-204ENST00000409958 PAIP2BQ9ULR5 123 aaKnown RBP15.54■□□□□ 0.08
VSX1-204ENST00000409958 CD5P06127 495 aa15.53■□□□□ 0.08
VSX1-204ENST00000409958 NPPCP23582 126 aa15.53■□□□□ 0.08
VSX1-204ENST00000409958 GAMTQ14353 236 aa15.53■□□□□ 0.08
VSX1-204ENST00000409958 DEFB125Q8N687 156 aa15.53■□□□□ 0.08
VSX1-204ENST00000409958 ZBTB8BQ8NAP8 495 aaPredicted RBP15.53■□□□□ 0.08
VSX1-204ENST00000409958 METTL26Q96S19 204 aa15.53■□□□□ 0.08
VSX1-204ENST00000409958 IGHV3OR16-13A0A075B7E8 117 aa15.52■□□□□ 0.08
VSX1-204ENST00000409958 IGHV3-74A0A0B4J1X5 117 aa15.52■□□□□ 0.08
VSX1-204ENST00000409958 APOHP02749 345 aaPredicted RBP15.52■□□□□ 0.08
VSX1-204ENST00000409958 SPANXN5Q5MJ07 72 aa15.52■□□□□ 0.08
VSX1-204ENST00000409958 FAM90A2PQ658T7 463 aa15.52■□□□□ 0.08
VSX1-204ENST00000409958 C12orf45Q8N5I9 185 aaPredicted RBP15.52■□□□□ 0.08
VSX1-204ENST00000409958 ST8SIA2Q92186 375 aa15.52■□□□□ 0.08
VSX1-204ENST00000409958 WFDC10AQ9H1F0 79 aa15.52■□□□□ 0.08
VSX1-204ENST00000409958 TMEM231Q9H6L2 316 aa15.52■□□□□ 0.08
VSX1-204ENST00000409958 STRAPQ9Y3F4 350 aaKnown RBP15.52■□□□□ 0.08
VSX1-204ENST00000409958 U3KQK5 164 aa15.52■□□□□ 0.08
VSX1-204ENST00000409958 A0A1W2PS18 150 aa15.51■□□□□ 0.07
VSX1-204ENST00000409958 OR4C46A6NHA9 309 aa15.51■□□□□ 0.07
VSX1-204ENST00000409958 TOMM40O96008 361 aa15.51■□□□□ 0.07
VSX1-204ENST00000409958 IL5P05113 134 aa15.51■□□□□ 0.07
VSX1-204ENST00000409958 CRYBB3P26998 211 aa15.51■□□□□ 0.07
VSX1-204ENST00000409958 SRD5A3Q9H8P0 318 aa15.51■□□□□ 0.07
VSX1-204ENST00000409958 GSKIPQ9P0R6 139 aa15.51■□□□□ 0.07
VSX1-204ENST00000409958 PRSS46E5RG02 174 aa15.5■□□□□ 0.07
VSX1-204ENST00000409958 H3BP45 60 aa15.5■□□□□ 0.07
VSX1-204ENST00000409958 SSSCA1O60232 199 aa15.5■□□□□ 0.07
VSX1-204ENST00000409958 RD3LP0DJH9 198 aa15.5■□□□□ 0.07
VSX1-204ENST00000409958 LINC00322Q6ZN03 302 aaPredicted RBP15.5■□□□□ 0.07
VSX1-204ENST00000409958 SMIM8Q96KF7 97 aa15.5■□□□□ 0.07
VSX1-204ENST00000409958 PSENENQ9NZ42 101 aa15.5■□□□□ 0.07
VSX1-204ENST00000409958 HUWE1Q7Z6Z7 4374 aaKnown RBP15.49■□□□□ 0.07
VSX1-204ENST00000409958 ZFP92A6NM28 416 aa15.49■□□□□ 0.07
VSX1-204ENST00000409958 CCSO14618 274 aa15.49■□□□□ 0.07
VSX1-204ENST00000409958 SCGB1D2O95969 90 aa15.49■□□□□ 0.07
VSX1-204ENST00000409958 HAGHQ16775 308 aa15.49■□□□□ 0.07
VSX1-204ENST00000409958 TCF24Q7RTU0 167 aa15.49■□□□□ 0.07
VSX1-204ENST00000409958 LILRB2Q8N423 598 aa15.49■□□□□ 0.07
VSX1-204ENST00000409958 NARS2Q96I59 477 aaKnown RBP15.49■□□□□ 0.07
VSX1-204ENST00000409958 RAB40CQ96S21 281 aa15.49■□□□□ 0.07
VSX1-204ENST00000409958 TM2D3Q9BRN9 247 aa15.49■□□□□ 0.07
VSX1-204ENST00000409958 ZMAT4Q9H898 229 aa15.49■□□□□ 0.07
VSX1-204ENST00000409958 STAB2Q8WWQ8 2551 aa15.49■□□□□ 0.07
VSX1-204ENST00000409958 IGKV1D-37A0A075B6S9 117 aa15.48■□□□□ 0.07
VSX1-204ENST00000409958 IGHV3-66A0A0C4DH42 116 aa15.48■□□□□ 0.07
VSX1-204ENST00000409958 IL4P05112 153 aa15.48■□□□□ 0.07
VSX1-204ENST00000409958 PSG1P11464 419 aa15.48■□□□□ 0.07
VSX1-204ENST00000409958 DEFA1P59665 94 aa15.48■□□□□ 0.07
VSX1-204ENST00000409958 DEFA3P59666 94 aa15.48■□□□□ 0.07
VSX1-204ENST00000409958 NRARPQ7Z6K4 114 aa15.48■□□□□ 0.07
VSX1-204ENST00000409958 FAM110AQ9BQ89 295 aa15.48■□□□□ 0.07
VSX1-204ENST00000409958 U3KQE9 123 aa15.48■□□□□ 0.07
VSX1-204ENST00000409958 RBMY1BA6NDE4 496 aaKnown RBP15.47■□□□□ 0.07
VSX1-204ENST00000409958 RBMY1EA6NEQ0 496 aaKnown RBP15.47■□□□□ 0.07
VSX1-204ENST00000409958 FAM25EA8MYX2 175 aa15.47■□□□□ 0.07
VSX1-204ENST00000409958 DFFBO76075 338 aa15.47■□□□□ 0.07
VSX1-204ENST00000409958 MBPP02686 304 aaPredicted RBP15.47■□□□□ 0.07
VSX1-204ENST00000409958 FABP1P07148 127 aa15.47■□□□□ 0.07
VSX1-204ENST00000409958 RBMY1DP0C7P1 496 aaKnown RBP15.47■□□□□ 0.07
VSX1-204ENST00000409958 PAX9P55771 341 aa15.47■□□□□ 0.07
VSX1-204ENST00000409958 TAS2R30P59541 319 aa15.47■□□□□ 0.07
VSX1-204ENST00000409958 PAFAH1B2P68402 229 aa15.47■□□□□ 0.07
VSX1-204ENST00000409958 USF2Q15853 346 aaPredicted RBP15.47■□□□□ 0.07
VSX1-204ENST00000409958 THAP8Q8NA92 274 aa15.47■□□□□ 0.07
VSX1-204ENST00000409958 OR51G1Q8NGK1 321 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms