RNA–Protein interactions for RNA: ENST00000409881.1

MINDY4-202, Transcript of MINDY lysine 48 deubiquitinase 4, humanhuman

TSL 2

Gene MINDY4, Length 2,488 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MINDY4-202ENST00000409881 BAHCC1Q9P281 2608 aa11.56□□□□□ -0.56
MINDY4-202ENST00000409881 NTF3P20783 257 aa11.56□□□□□ -0.56
MINDY4-202ENST00000409881 TCL1AP56279 114 aa11.56□□□□□ -0.56
MINDY4-202ENST00000409881 MOB1BQ7L9L4 216 aa11.56□□□□□ -0.56
MINDY4-202ENST00000409881 NIT1Q86X76 327 aa11.56□□□□□ -0.56
MINDY4-202ENST00000409881 MRGPRDQ8TDS7 321 aa11.56□□□□□ -0.56
MINDY4-202ENST00000409881 SSBP3Q9BWW4 388 aaPredicted RBP11.56□□□□□ -0.56
MINDY4-202ENST00000409881 ZNF324O75467 553 aaPredicted RBP11.55□□□□□ -0.56
MINDY4-202ENST00000409881 MMP23AO75900 390 aa11.55□□□□□ -0.56
MINDY4-202ENST00000409881 CXorf1O96002 111 aa11.55□□□□□ -0.56
MINDY4-202ENST00000409881 SRIP30626 198 aa11.55□□□□□ -0.56
MINDY4-202ENST00000409881 PRRX1P54821 245 aa11.55□□□□□ -0.56
MINDY4-202ENST00000409881 LMO4P61968 165 aa11.55□□□□□ -0.56
MINDY4-202ENST00000409881 PDLIM3Q53GG5 364 aaPredicted RBP11.55□□□□□ -0.56
MINDY4-202ENST00000409881 ERASQ7Z444 233 aa11.55□□□□□ -0.56
MINDY4-202ENST00000409881 OR52L2PQ8NGH6 319 aa11.55□□□□□ -0.56
MINDY4-202ENST00000409881 OR13A1Q8NGR1 328 aa11.55□□□□□ -0.56
MINDY4-202ENST00000409881 EAF1Q96JC9 268 aaPredicted RBP11.55□□□□□ -0.56
MINDY4-202ENST00000409881 Q96MF0 132 aa11.55□□□□□ -0.56
MINDY4-202ENST00000409881 CCDC168Q8NDH2 2452 aa11.55□□□□□ -0.56
MINDY4-202ENST00000409881 SPATA31B1PQ5VZV4 182 aa11.55□□□□□ -0.56
MINDY4-202ENST00000409881 KRTAP1-3Q8IUG1 177 aa11.55□□□□□ -0.56
MINDY4-202ENST00000409881 TCTEX1D1Q8N7M0 179 aa11.55□□□□□ -0.56
MINDY4-202ENST00000409881 BET1LQ9NYM9 111 aa11.55□□□□□ -0.56
MINDY4-202ENST00000409881 MALRD1Q5VYJ5 2156 aa11.55□□□□□ -0.56
MINDY4-202ENST00000409881 RAB29O14966 203 aa11.54□□□□□ -0.56
MINDY4-202ENST00000409881 USF1P22415 310 aaPredicted RBP11.54□□□□□ -0.56
MINDY4-202ENST00000409881 FXYD3Q14802 87 aa11.54□□□□□ -0.56
MINDY4-202ENST00000409881 FBLN7Q53RD9 439 aa11.54□□□□□ -0.56
MINDY4-202ENST00000409881 PRSS57Q6UWY2 283 aa11.54□□□□□ -0.56
MINDY4-202ENST00000409881 TMEM136Q6ZRR5 245 aa11.54□□□□□ -0.56
MINDY4-202ENST00000409881 KLHDC1Q8N7A1 406 aa11.54□□□□□ -0.56
MINDY4-202ENST00000409881 OR4C5Q8NGB2 326 aa11.54□□□□□ -0.56
MINDY4-202ENST00000409881 SSMEM1Q8WWF3 244 aa11.54□□□□□ -0.56
MINDY4-202ENST00000409881 MGST2Q99735 147 aa11.54□□□□□ -0.56
MINDY4-202ENST00000409881 TXNDC17Q9BRA2 123 aa11.54□□□□□ -0.56
MINDY4-202ENST00000409881 CSMD1Q96PZ7 3565 aa11.54□□□□□ -0.56
MINDY4-202ENST00000409881 TRGV10A0A0A0MS01 117 aa11.54□□□□□ -0.56
MINDY4-202ENST00000409881 TRBV9A0A0B4J1U6 114 aa11.54□□□□□ -0.56
MINDY4-202ENST00000409881 hADV38S2A0JD32 116 aa11.54□□□□□ -0.56
MINDY4-202ENST00000409881 FOXH1O75593 365 aa11.54□□□□□ -0.56
MINDY4-202ENST00000409881 CA2P00918 260 aa11.54□□□□□ -0.56
MINDY4-202ENST00000409881 OR10J3Q5JRS4 329 aa11.54□□□□□ -0.56
MINDY4-202ENST00000409881 TREML4Q6UXN2 200 aa11.54□□□□□ -0.56
MINDY4-202ENST00000409881 RNASE7Q9H1E1 156 aaKnown RBP11.54□□□□□ -0.56
MINDY4-202ENST00000409881 SLC35D1Q9NTN3 355 aa11.54□□□□□ -0.56
MINDY4-202ENST00000409881 KCNIP1Q9NZI2 227 aa11.54□□□□□ -0.56
MINDY4-202ENST00000409881 PDZD2O15018 2839 aa11.54□□□□□ -0.56
MINDY4-202ENST00000409881 SAA2-SAA4A0A096LPE2 208 aa11.53□□□□□ -0.56
MINDY4-202ENST00000409881 RNF223E7ERA6 249 aa11.53□□□□□ -0.56
MINDY4-202ENST00000409881 M0QZ24 198 aa11.53□□□□□ -0.56
MINDY4-202ENST00000409881 GCHFRP30047 84 aa11.53□□□□□ -0.56
MINDY4-202ENST00000409881 SSTR5P35346 364 aa11.53□□□□□ -0.56
MINDY4-202ENST00000409881 OPRK1P41145 380 aa11.53□□□□□ -0.56
MINDY4-202ENST00000409881 CATR1Q13166 79 aa11.53□□□□□ -0.56
MINDY4-202ENST00000409881 MRPL54Q6P161 138 aaKnown RBP11.53□□□□□ -0.56
MINDY4-202ENST00000409881 TSKUQ8WUA8 353 aa11.53□□□□□ -0.56
MINDY4-202ENST00000409881 FOXC2Q99958 501 aa11.53□□□□□ -0.56
MINDY4-202ENST00000409881 MBNL3Q9NUK0 354 aaKnown RBP11.53□□□□□ -0.56
MINDY4-202ENST00000409881 FLNBO75369 2602 aaKnown RBP11.53□□□□□ -0.56
MINDY4-202ENST00000409881 NOTCH2Q04721 2471 aa11.53□□□□□ -0.56
MINDY4-202ENST00000409881 C22orf46C9J442 243 aa11.53□□□□□ -0.56
MINDY4-202ENST00000409881 C12orf77C9JDV5 145 aa11.53□□□□□ -0.56
MINDY4-202ENST00000409881 BMPR1BO00238 502 aa11.53□□□□□ -0.56
MINDY4-202ENST00000409881 ZFP36P26651 326 aaKnown RBP11.53□□□□□ -0.56
MINDY4-202ENST00000409881 MEF2CQ06413 473 aaPredicted RBP11.53□□□□□ -0.56
MINDY4-202ENST00000409881 EIF4EBP1Q13541 118 aaPredicted RBP11.53□□□□□ -0.56
MINDY4-202ENST00000409881 TMEM200BQ69YZ2 307 aa11.53□□□□□ -0.56
MINDY4-202ENST00000409881 WFDC11Q8NEX6 87 aa11.53□□□□□ -0.56
MINDY4-202ENST00000409881 BORCS7Q96B45 105 aa11.53□□□□□ -0.56
MINDY4-202ENST00000409881 GGTLC1Q9BX51 225 aa11.53□□□□□ -0.56
MINDY4-202ENST00000409881 CLEC7AQ9BXN2 247 aa11.53□□□□□ -0.56
MINDY4-202ENST00000409881 SEPSECSQ9HD40 501 aaKnown RBP11.53□□□□□ -0.56
MINDY4-202ENST00000409881 RNF24Q9Y225 148 aa11.53□□□□□ -0.56
MINDY4-202ENST00000409881 MRPS16Q9Y3D3 137 aaKnown RBP11.53□□□□□ -0.56
MINDY4-202ENST00000409881 OR9G9P0C7N8 305 aa11.52□□□□□ -0.56
MINDY4-202ENST00000409881 CX3CL1P78423 397 aa11.52□□□□□ -0.56
MINDY4-202ENST00000409881 MAPK1IP1LQ8NDC0 245 aa11.52□□□□□ -0.56
MINDY4-202ENST00000409881 RFESDQ8TAC1 157 aa11.52□□□□□ -0.56
MINDY4-202ENST00000409881 NCOR1P1Q9H4R4 102 aa11.52□□□□□ -0.56
MINDY4-202ENST00000409881 RPUSD1Q9UJJ7 312 aaKnown RBP11.52□□□□□ -0.56
MINDY4-202ENST00000409881 LINC00312Q9Y6C7 94 aa11.52□□□□□ -0.56
MINDY4-202ENST00000409881 MAP1AP78559 2803 aaPredicted RBP11.52□□□□□ -0.56
MINDY4-202ENST00000409881 MED13LQ71F56 2210 aa11.52□□□□□ -0.57
MINDY4-202ENST00000409881 PRRC2AP48634 2157 aaKnown RBP11.52□□□□□ -0.57
MINDY4-202ENST00000409881 IGHV2-70DA0A0C4DH43 119 aa11.52□□□□□ -0.57
MINDY4-202ENST00000409881 LINC00473A8K010 186 aa11.52□□□□□ -0.57
MINDY4-202ENST00000409881 CCL3L1P16619 93 aa11.52□□□□□ -0.57
MINDY4-202ENST00000409881 CENPWQ5EE01 88 aa11.52□□□□□ -0.57
MINDY4-202ENST00000409881 WDR73Q6P4I2 378 aa11.52□□□□□ -0.57
MINDY4-202ENST00000409881 ASH1LQ9NR48 2969 aaKnown RBP11.52□□□□□ -0.57
MINDY4-202ENST00000409881 IGHV2-26A0A0B4J1V2 119 aa11.51□□□□□ -0.57
MINDY4-202ENST00000409881 C9JCJ5 164 aa11.51□□□□□ -0.57
MINDY4-202ENST00000409881 MT-ND6P03923 174 aa11.51□□□□□ -0.57
MINDY4-202ENST00000409881 LTC4SQ16873 150 aa11.51□□□□□ -0.57
MINDY4-202ENST00000409881 MORN2Q502X0 79 aa11.51□□□□□ -0.57
MINDY4-202ENST00000409881 TRAT1Q6PIZ9 186 aa11.51□□□□□ -0.57
MINDY4-202ENST00000409881 PQLC2Q6ZP29 291 aa11.51□□□□□ -0.57
MINDY4-202ENST00000409881 ZBTB34Q8NCN2 500 aa11.51□□□□□ -0.57
MINDY4-202ENST00000409881 GALMQ96C23 342 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms