RNA–Protein interactions for RNA: ENST00000409766.7

USP39-204, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2 BASIC

Gene USP39, Length 2,033 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-204ENST00000409766 LCN2P80188 198 aa16.01■□□□□ 0.15
USP39-204ENST00000409766 FBLN7Q53RD9 439 aa16.01■□□□□ 0.15
USP39-204ENST00000409766 DYNAPQ8N1N2 210 aa16.01■□□□□ 0.15
USP39-204ENST00000409766 SFRP2Q96HF1 295 aa16.01■□□□□ 0.15
USP39-204ENST00000409766 SRD5A3Q9H8P0 318 aa16.01■□□□□ 0.15
USP39-204ENST00000409766 ELOA3CA0A087WX78 387 aaPredicted RBP16■□□□□ 0.15
USP39-204ENST00000409766 IGHV3-21A0A0B4J1V1 117 aa16■□□□□ 0.15
USP39-204ENST00000409766 PPP1R2P9O14990 202 aa16■□□□□ 0.15
USP39-204ENST00000409766 WNK2Q9Y3S1 2297 aa16■□□□□ 0.15
USP39-204ENST00000409766 GGCTO75223 188 aaKnown RBP15.99■□□□□ 0.15
USP39-204ENST00000409766 CRYBB3P26998 211 aa15.99■□□□□ 0.15
USP39-204ENST00000409766 UBE2L3P68036 154 aaKnown RBP15.99■□□□□ 0.15
USP39-204ENST00000409766 MINOS1Q5TGZ0 78 aa15.99■□□□□ 0.15
USP39-204ENST00000409766 CCDC144NLQ6NUI1 221 aa15.99■□□□□ 0.15
USP39-204ENST00000409766 FRZBQ92765 325 aa15.99■□□□□ 0.15
USP39-204ENST00000409766 LY96Q9Y6Y9 160 aa15.99■□□□□ 0.15
USP39-204ENST00000409766 MINOS1-NBL1R4GNA1 71 aa15.99■□□□□ 0.15
USP39-204ENST00000409766 OOSP1A8MZH6 123 aa15.99■□□□□ 0.15
USP39-204ENST00000409766 I3L2K1 104 aa15.99■□□□□ 0.15
USP39-204ENST00000409766 LMO4P61968 165 aa15.99■□□□□ 0.15
USP39-204ENST00000409766 LINC00305Q7Z4B0 112 aa15.99■□□□□ 0.15
USP39-204ENST00000409766 OR2T10Q8NGZ9 312 aa15.99■□□□□ 0.15
USP39-204ENST00000409766 BPESC1Q9GZL8 116 aa15.99■□□□□ 0.15
USP39-204ENST00000409766 WNT10AQ9GZT5 417 aa15.99■□□□□ 0.15
USP39-204ENST00000409766 AKAP6Q13023 2319 aa15.98■□□□□ 0.15
USP39-204ENST00000409766 IGHV2-70DA0A0C4DH43 119 aa15.98■□□□□ 0.15
USP39-204ENST00000409766 A0A1W2PPQ1 181 aa15.98■□□□□ 0.15
USP39-204ENST00000409766 K7EN84 100 aa15.98■□□□□ 0.15
USP39-204ENST00000409766 SUMO1P63165 101 aaKnown RBP15.98■□□□□ 0.15
USP39-204ENST00000409766 HES1Q14469 280 aa15.98■□□□□ 0.15
USP39-204ENST00000409766 MDFIC2A0A1B0GVS7 189 aa15.97■□□□□ 0.15
USP39-204ENST00000409766 ZNF98A6NK75 572 aa15.97■□□□□ 0.15
USP39-204ENST00000409766 TRGC1P0CF51 173 aa15.97■□□□□ 0.15
USP39-204ENST00000409766 PYYP10082 97 aa15.97■□□□□ 0.15
USP39-204ENST00000409766 HOXA5P20719 270 aa15.97■□□□□ 0.15
USP39-204ENST00000409766 CLEC12BQ2HXU8 276 aa15.97■□□□□ 0.15
USP39-204ENST00000409766 C5orf64Q2M2E5 130 aa15.97■□□□□ 0.15
USP39-204ENST00000409766 TEX38Q6PEX7 206 aa15.97■□□□□ 0.15
USP39-204ENST00000409766 IMMP2LQ96T52 175 aa15.97■□□□□ 0.15
USP39-204ENST00000409766 PAXXQ9BUH6 204 aa15.97■□□□□ 0.15
USP39-204ENST00000409766 MED13LQ71F56 2210 aa15.97■□□□□ 0.15
USP39-204ENST00000409766 ABCA1O95477 2261 aa15.97■□□□□ 0.15
USP39-204ENST00000409766 HELTA6NFD8 242 aa15.97■□□□□ 0.15
USP39-204ENST00000409766 PPP5D1E7EU14 171 aa15.97■□□□□ 0.15
USP39-204ENST00000409766 ORM2P19652 201 aa15.97■□□□□ 0.15
USP39-204ENST00000409766 HNF1AP20823 631 aa15.97■□□□□ 0.15
USP39-204ENST00000409766 NDUFA6P56556 154 aa15.97■□□□□ 0.15
USP39-204ENST00000409766 FXYD3Q14802 87 aa15.97■□□□□ 0.15
USP39-204ENST00000409766 KCNIP4Q6PIL6 250 aa15.97■□□□□ 0.15
USP39-204ENST00000409766 OR51M1Q9H341 326 aa15.97■□□□□ 0.15
USP39-204ENST00000409766 S100A8P05109 93 aa15.96■□□□□ 0.15
USP39-204ENST00000409766 Q8N6K4 173 aa15.96■□□□□ 0.15
USP39-204ENST00000409766 OR1B1Q8NGR6 318 aa15.96■□□□□ 0.15
USP39-204ENST00000409766 FXYD5Q96DB9 178 aa15.96■□□□□ 0.15
USP39-204ENST00000409766 C12orf57Q99622 126 aa15.96■□□□□ 0.15
USP39-204ENST00000409766 GSX1Q9H4S2 264 aaPredicted RBP15.96■□□□□ 0.15
USP39-204ENST00000409766 TYMSP04818 313 aa15.95■□□□□ 0.14
USP39-204ENST00000409766 MEOX2P50222 304 aa15.95■□□□□ 0.14
USP39-204ENST00000409766 PLP1P60201 277 aa15.95■□□□□ 0.14
USP39-204ENST00000409766 FOXL1Q12952 345 aa15.95■□□□□ 0.14
USP39-204ENST00000409766 EBI3Q14213 229 aa15.95■□□□□ 0.14
USP39-204ENST00000409766 PERPQ96FX8 193 aa15.95■□□□□ 0.14
USP39-204ENST00000409766 TOX4O94842 621 aa15.95■□□□□ 0.14
USP39-204ENST00000409766 IGLC1P0CG04 106 aa15.95■□□□□ 0.14
USP39-204ENST00000409766 FAM3BP58499 235 aaPredicted RBP15.95■□□□□ 0.14
USP39-204ENST00000409766 FAM103A1Q9BTL3 118 aaKnown RBP15.95■□□□□ 0.14
USP39-204ENST00000409766 CENPWQ5EE01 88 aa15.94■□□□□ 0.14
USP39-204ENST00000409766 OR10G8Q8NGN5 311 aa15.94■□□□□ 0.14
USP39-204ENST00000409766 TBX15Q96SF7 602 aa15.94■□□□□ 0.14
USP39-204ENST00000409766 COL12A1Q99715 3063 aa15.94■□□□□ 0.14
USP39-204ENST00000409766 K7EIM0 57 aa15.94■□□□□ 0.14
USP39-204ENST00000409766 HYPMO75409 117 aa15.94■□□□□ 0.14
USP39-204ENST00000409766 IGHV4-39P01824 125 aa15.94■□□□□ 0.14
USP39-204ENST00000409766 GNG4P50150 75 aa15.94■□□□□ 0.14
USP39-204ENST00000409766 ZNF562Q6V9R5 426 aa15.94■□□□□ 0.14
USP39-204ENST00000409766 STXBP6Q8NFX7 210 aa15.94■□□□□ 0.14
USP39-204ENST00000409766 SGMS2Q8NHU3 365 aa15.94■□□□□ 0.14
USP39-204ENST00000409766 CDX1P47902 265 aaPredicted RBP15.93■□□□□ 0.14
USP39-204ENST00000409766 UBE2E1P51965 193 aa15.93■□□□□ 0.14
USP39-204ENST00000409766 OR1L6Q8NGR2 347 aa15.93■□□□□ 0.14
USP39-204ENST00000409766 TBL2Q9Y4P3 447 aaKnown RBP15.93■□□□□ 0.14
USP39-204ENST00000409766 CACNA1BQ00975 2339 aa15.93■□□□□ 0.14
USP39-204ENST00000409766 SPTAN1Q13813 2472 aaKnown RBP15.93■□□□□ 0.14
USP39-204ENST00000409766 AJUBAQ96IF1 538 aa15.92■□□□□ 0.14
USP39-204ENST00000409766 PSG1P11464 419 aa15.92■□□□□ 0.14
USP39-204ENST00000409766 CX3CL1P78423 397 aa15.92■□□□□ 0.14
USP39-204ENST00000409766 TCEAL7Q9BRU2 100 aa15.92■□□□□ 0.14
USP39-204ENST00000409766 SVEP1Q4LDE5 3571 aa15.91■□□□□ 0.14
USP39-204ENST00000409766 CSMD1Q96PZ7 3565 aa15.91■□□□□ 0.14
USP39-204ENST00000409766 IFITM10A6NMD0 228 aa15.91■□□□□ 0.14
USP39-204ENST00000409766 NCBP2LA6PVI3 153 aaKnown RBP15.91■□□□□ 0.14
USP39-204ENST00000409766 ZNF329Q86UD4 541 aa15.91■□□□□ 0.14
USP39-204ENST00000409766 FLNCQ14315 2725 aa15.91■□□□□ 0.14
USP39-204ENST00000409766 IGKV1-17P01599 117 aa15.9■□□□□ 0.14
USP39-204ENST00000409766 MYCNOSP40205 109 aa15.9■□□□□ 0.14
USP39-204ENST00000409766 OR5I1Q13606 314 aa15.9■□□□□ 0.14
USP39-204ENST00000409766 TIGITQ495A1 244 aa15.9■□□□□ 0.14
USP39-204ENST00000409766 ASPHD1Q5U4P2 390 aa15.9■□□□□ 0.14
USP39-204ENST00000409766 ARPC1AQ92747 370 aa15.9■□□□□ 0.14
USP39-204ENST00000409766 BTF3L4Q96K17 158 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms