RNA–Protein interactions for RNA: ENST00000406659.3

DNMT3A-206, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 1 (best) BASIC

Gene DNMT3A, Length 1,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-206ENST00000406659 DOPEY1Q5JWR5 2465 aa19.57■□□□□ 0.72
DNMT3A-206ENST00000406659 SAA4P35542 130 aa19.57■□□□□ 0.72
DNMT3A-206ENST00000406659 SSX3Q99909 188 aa19.57■□□□□ 0.72
DNMT3A-206ENST00000406659 SAV1Q9H4B6 383 aaPredicted RBP19.57■□□□□ 0.72
DNMT3A-206ENST00000406659 ORM2P19652 201 aa19.56■□□□□ 0.72
DNMT3A-206ENST00000406659 BRS3P32247 399 aa19.56■□□□□ 0.72
DNMT3A-206ENST00000406659 CX3CL1P78423 397 aa19.56■□□□□ 0.72
DNMT3A-206ENST00000406659 ARPC1AQ92747 370 aa19.56■□□□□ 0.72
DNMT3A-206ENST00000406659 C11orf52Q96A22 123 aa19.56■□□□□ 0.72
DNMT3A-206ENST00000406659 ANAPC16Q96DE5 110 aa19.56■□□□□ 0.72
DNMT3A-206ENST00000406659 MED13LQ71F56 2210 aa19.56■□□□□ 0.72
DNMT3A-206ENST00000406659 H7BYZ3 331 aa19.55■□□□□ 0.72
DNMT3A-206ENST00000406659 LINC01551Q86U37 167 aa19.55■□□□□ 0.72
DNMT3A-206ENST00000406659 OR1B1Q8NGR6 318 aa19.55■□□□□ 0.72
DNMT3A-206ENST00000406659 PERPQ96FX8 193 aa19.55■□□□□ 0.72
DNMT3A-206ENST00000406659 AJUBAQ96IF1 538 aa19.55■□□□□ 0.72
DNMT3A-206ENST00000406659 C1RLQ9NZP8 487 aa19.55■□□□□ 0.72
DNMT3A-206ENST00000406659 IGHV4-61A0A0C4DH41 118 aa19.55■□□□□ 0.72
DNMT3A-206ENST00000406659 NPFFO15130 113 aa19.55■□□□□ 0.72
DNMT3A-206ENST00000406659 UBE2L3P68036 154 aaKnown RBP19.55■□□□□ 0.72
DNMT3A-206ENST00000406659 LINC00305Q7Z4B0 112 aa19.55■□□□□ 0.72
DNMT3A-206ENST00000406659 ZNF843Q8N446 348 aa19.55■□□□□ 0.72
DNMT3A-206ENST00000406659 PAXXQ9BUH6 204 aa19.55■□□□□ 0.72
DNMT3A-206ENST00000406659 FAM120AOSQ5T036 256 aa19.54■□□□□ 0.72
DNMT3A-206ENST00000406659 C1QL4Q86Z23 238 aa19.54■□□□□ 0.72
DNMT3A-206ENST00000406659 OR5B12Q96R08 314 aa19.54■□□□□ 0.72
DNMT3A-206ENST00000406659 GSX1Q9H4S2 264 aaPredicted RBP19.54■□□□□ 0.72
DNMT3A-206ENST00000406659 A0A1W2PRE2 83 aa19.53■□□□□ 0.72
DNMT3A-206ENST00000406659 VWC2LB2RUY7 222 aa19.53■□□□□ 0.72
DNMT3A-206ENST00000406659 HYPMO75409 117 aa19.53■□□□□ 0.72
DNMT3A-206ENST00000406659 PAX8Q06710 450 aa19.53■□□□□ 0.72
DNMT3A-206ENST00000406659 OR51M1Q9H341 326 aa19.53■□□□□ 0.72
DNMT3A-206ENST00000406659 NPIPB5A8MRT5 1133 aa19.52■□□□□ 0.72
DNMT3A-206ENST00000406659 FAM210BQ96KR6 192 aa19.52■□□□□ 0.72
DNMT3A-206ENST00000406659 K7EIM0 57 aa19.52■□□□□ 0.71
DNMT3A-206ENST00000406659 IGLC1P0CG04 106 aa19.52■□□□□ 0.71
DNMT3A-206ENST00000406659 S100PP25815 95 aa19.52■□□□□ 0.71
DNMT3A-206ENST00000406659 SMUG1Q53HV7 270 aa19.52■□□□□ 0.71
DNMT3A-206ENST00000406659 AURKAIP1Q9NWT8 199 aaPredicted RBP19.52■□□□□ 0.71
DNMT3A-206ENST00000406659 FLNCQ14315 2725 aa19.51■□□□□ 0.71
DNMT3A-206ENST00000406659 CENPVL3A0A0U1RRI6 287 aa19.51■□□□□ 0.71
DNMT3A-206ENST00000406659 GALR1P47211 349 aa19.51■□□□□ 0.71
DNMT3A-206ENST00000406659 SUMO1P63165 101 aaKnown RBP19.51■□□□□ 0.71
DNMT3A-206ENST00000406659 NECAP1Q8NC96 275 aa19.51■□□□□ 0.71
DNMT3A-206ENST00000406659 RBM14Q96PK6 669 aaKnown RBP19.51■□□□□ 0.71
DNMT3A-206ENST00000406659 RASL11BQ9BPW5 248 aa19.51■□□□□ 0.71
DNMT3A-206ENST00000406659 TRBV20OR9-2A0A075B6H5 130 aa19.5■□□□□ 0.71
DNMT3A-206ENST00000406659 PGPEP1LA6NFU8 196 aa19.5■□□□□ 0.71
DNMT3A-206ENST00000406659 S100A6P06703 90 aa19.5■□□□□ 0.71
DNMT3A-206ENST00000406659 PYYP10082 97 aa19.5■□□□□ 0.71
DNMT3A-206ENST00000406659 CRYBB3P26998 211 aa19.5■□□□□ 0.71
DNMT3A-206ENST00000406659 PLP1P60201 277 aa19.5■□□□□ 0.71
DNMT3A-206ENST00000406659 TIGITQ495A1 244 aa19.5■□□□□ 0.71
DNMT3A-206ENST00000406659 Q8N9W7 124 aa19.5■□□□□ 0.71
DNMT3A-206ENST00000406659 STXBP6Q8NFX7 210 aa19.5■□□□□ 0.71
DNMT3A-206ENST00000406659 GGTLC3B5MD39 225 aa19.49■□□□□ 0.71
DNMT3A-206ENST00000406659 FABP1P07148 127 aa19.49■□□□□ 0.71
DNMT3A-206ENST00000406659 CD99P14209 185 aa19.49■□□□□ 0.71
DNMT3A-206ENST00000406659 NDPQ00604 133 aa19.49■□□□□ 0.71
DNMT3A-206ENST00000406659 KLF17Q5JT82 389 aaPredicted RBP19.49■□□□□ 0.71
DNMT3A-206ENST00000406659 ASPHD1Q5U4P2 390 aa19.49■□□□□ 0.71
DNMT3A-206ENST00000406659 PIP4P2Q8N4L2 257 aa19.49■□□□□ 0.71
DNMT3A-206ENST00000406659 TTC9CQ8N5M4 171 aa19.49■□□□□ 0.71
DNMT3A-206ENST00000406659 USP9XQ93008 2570 aaPredicted RBP19.49■□□□□ 0.71
DNMT3A-206ENST00000406659 TRBV24-1A0A075B6N3 115 aa19.49■□□□□ 0.71
DNMT3A-206ENST00000406659 IGHV4-30-2A0A087WSY4 118 aa19.49■□□□□ 0.71
DNMT3A-206ENST00000406659 PFN1P07737 140 aaKnown RBP19.49■□□□□ 0.71
DNMT3A-206ENST00000406659 PSG1P11464 419 aa19.49■□□□□ 0.71
DNMT3A-206ENST00000406659 RPL35P42766 123 aaKnown RBP19.49■□□□□ 0.71
DNMT3A-206ENST00000406659 OCC1Q8TAD7 63 aa19.49■□□□□ 0.71
DNMT3A-206ENST00000406659 MDFIC2A0A1B0GVS7 189 aa19.48■□□□□ 0.71
DNMT3A-206ENST00000406659 HELTA6NFD8 242 aa19.48■□□□□ 0.71
DNMT3A-206ENST00000406659 PPP1R2P9O14990 202 aa19.48■□□□□ 0.71
DNMT3A-206ENST00000406659 COX6B1P14854 86 aa19.48■□□□□ 0.71
DNMT3A-206ENST00000406659 HIGD1AQ9Y241 93 aa19.48■□□□□ 0.71
DNMT3A-206ENST00000406659 C9JCJ5 164 aa19.47■□□□□ 0.71
DNMT3A-206ENST00000406659 LYZP61626 148 aa19.47■□□□□ 0.71
DNMT3A-206ENST00000406659 FXYD5Q96DB9 178 aa19.47■□□□□ 0.71
DNMT3A-206ENST00000406659 IGHV7-81A0A0B4J1V7 117 aa19.47■□□□□ 0.71
DNMT3A-206ENST00000406659 HLA-DRB1P01911 266 aa19.47■□□□□ 0.71
DNMT3A-206ENST00000406659 RD3LP0DJH9 198 aa19.47■□□□□ 0.71
DNMT3A-206ENST00000406659 HNF1AP20823 631 aa19.47■□□□□ 0.71
DNMT3A-206ENST00000406659 LY96Q9Y6Y9 160 aa19.47■□□□□ 0.71
DNMT3A-206ENST00000406659 IGLV11-55A0A075B6I3 123 aa19.46■□□□□ 0.71
DNMT3A-206ENST00000406659 TGOLN2O43493 480 aa19.46■□□□□ 0.71
DNMT3A-206ENST00000406659 IGKV1-17P01599 117 aa19.46■□□□□ 0.71
DNMT3A-206ENST00000406659 SRP14P37108 136 aaKnown RBP19.46■□□□□ 0.71
DNMT3A-206ENST00000406659 SNRPEP62304 92 aaKnown RBP19.46■□□□□ 0.71
DNMT3A-206ENST00000406659 SFRP2Q96HF1 295 aa19.46■□□□□ 0.71
DNMT3A-206ENST00000406659 FANCD2OSQ96PS1 177 aa19.46■□□□□ 0.71
DNMT3A-206ENST00000406659 IGHV1-69DA0A0B4J2H0 117 aa19.45■□□□□ 0.7
DNMT3A-206ENST00000406659 IGHV1-69P01742 117 aa19.45■□□□□ 0.7
DNMT3A-206ENST00000406659 DSCR9P59020 149 aa19.45■□□□□ 0.7
DNMT3A-206ENST00000406659 ELOVL1Q9BW60 279 aa19.45■□□□□ 0.7
DNMT3A-206ENST00000406659 IGHV3OR16-10A0A075B7F0 116 aa19.44■□□□□ 0.7
DNMT3A-206ENST00000406659 EGR2P11161 476 aaPredicted RBP19.44■□□□□ 0.7
DNMT3A-206ENST00000406659 MFAP4P55083 255 aa19.44■□□□□ 0.7
DNMT3A-206ENST00000406659 THYN1Q9P016 225 aa19.44■□□□□ 0.7
DNMT3A-206ENST00000406659 MYO18BQ8IUG5 2567 aa19.44■□□□□ 0.7
DNMT3A-206ENST00000406659 GNG4P50150 75 aa19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms