RNA–Protein interactions for RNA: ENST00000404008.6

USP42-202, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 1,380 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-202ENST00000404008 CHAC2Q8WUX2 184 aa22.41■■□□□ 1.18
USP42-202ENST00000404008 MBD2Q9UBB5 411 aa22.41■■□□□ 1.18
USP42-202ENST00000404008 CST7O76096 145 aa22.4■■□□□ 1.18
USP42-202ENST00000404008 SCAF4O95104 1147 aaKnown RBP22.4■■□□□ 1.18
USP42-202ENST00000404008 IGKV1-17P01599 117 aa22.4■■□□□ 1.18
USP42-202ENST00000404008 LYL1P12980 280 aa22.4■■□□□ 1.18
USP42-202ENST00000404008 SULT1A1P50225 295 aa22.4■■□□□ 1.18
USP42-202ENST00000404008 DLK1P80370 383 aa22.4■■□□□ 1.18
USP42-202ENST00000404008 OR9G4Q8NGQ1 327 aa22.4■■□□□ 1.18
USP42-202ENST00000404008 OR1S2Q8NGQ3 325 aa22.4■■□□□ 1.18
USP42-202ENST00000404008 MGAM2Q2M2H8 2515 aa22.4■■□□□ 1.18
USP42-202ENST00000404008 NDUFA4O00483 81 aa22.39■■□□□ 1.18
USP42-202ENST00000404008 TIGITQ495A1 244 aa22.39■■□□□ 1.18
USP42-202ENST00000404008 UNQ9165/PRO28630Q6UXU0 137 aa22.39■■□□□ 1.18
USP42-202ENST00000404008 STX12Q86Y82 276 aa22.39■■□□□ 1.18
USP42-202ENST00000404008 IGLL1P15814 213 aa22.38■■□□□ 1.17
USP42-202ENST00000404008 FGL1Q08830 312 aa22.38■■□□□ 1.17
USP42-202ENST00000404008 THAP6Q8TBB0 222 aa22.38■■□□□ 1.17
USP42-202ENST00000404008 MCRIP2Q9BUT9 160 aaKnown RBP22.38■■□□□ 1.17
USP42-202ENST00000404008 GGACTQ9BVM4 153 aa22.38■■□□□ 1.17
USP42-202ENST00000404008 ZNF320A2RRD8 509 aa22.38■■□□□ 1.17
USP42-202ENST00000404008 FNDC10F2Z333 226 aa22.38■■□□□ 1.17
USP42-202ENST00000404008 SLC38A11Q08AI6 406 aa22.38■■□□□ 1.17
USP42-202ENST00000404008 ZNF600Q6ZNG1 722 aa22.38■■□□□ 1.17
USP42-202ENST00000404008 TMEM217Q8N7C4 229 aa22.38■■□□□ 1.17
USP42-202ENST00000404008 THAP8Q8NA92 274 aa22.38■■□□□ 1.17
USP42-202ENST00000404008 TMEM190Q8WZ59 177 aa22.38■■□□□ 1.17
USP42-202ENST00000404008 SLC25A31Q9H0C2 315 aa22.38■■□□□ 1.17
USP42-202ENST00000404008 PEMTQ9UBM1 199 aa22.38■■□□□ 1.17
USP42-202ENST00000404008 IGKV1D-37A0A075B6S9 117 aa22.37■■□□□ 1.17
USP42-202ENST00000404008 IGKV1OR2-108A0A075B7D4 117 aa22.37■■□□□ 1.17
USP42-202ENST00000404008 A8MWP6 167 aa22.37■■□□□ 1.17
USP42-202ENST00000404008 SEC14L6B5MCN3 397 aa22.37■■□□□ 1.17
USP42-202ENST00000404008 EWSR1Q01844 656 aaKnown RBP eCLIP22.37■■□□□ 1.17
USP42-202ENST00000404008 Q5BKY6 102 aa22.37■■□□□ 1.17
USP42-202ENST00000404008 IL34Q6ZMJ4 242 aa22.37■■□□□ 1.17
USP42-202ENST00000404008 YPEL3P61236 119 aaPredicted RBP22.36■■□□□ 1.17
USP42-202ENST00000404008 AKR1C1Q04828 323 aa22.36■■□□□ 1.17
USP42-202ENST00000404008 OR2T35Q8NGX2 323 aa22.36■■□□□ 1.17
USP42-202ENST00000404008 ELOVL1Q9BW60 279 aa22.36■■□□□ 1.17
USP42-202ENST00000404008 SMCO3A2RU48 225 aa22.35■■□□□ 1.17
USP42-202ENST00000404008 ZFP92A6NM28 416 aa22.35■■□□□ 1.17
USP42-202ENST00000404008 HBG1P69891 147 aa22.35■■□□□ 1.17
USP42-202ENST00000404008 HBG2P69892 147 aa22.35■■□□□ 1.17
USP42-202ENST00000404008 PUS1Q9Y606 427 aaKnown RBP eCLIP22.35■■□□□ 1.17
USP42-202ENST00000404008 S100A11P31949 105 aa22.34■■□□□ 1.17
USP42-202ENST00000404008 NHLH2Q02577 135 aa22.34■■□□□ 1.17
USP42-202ENST00000404008 BAXQ07812 192 aa22.34■■□□□ 1.17
USP42-202ENST00000404008 TOMM20LQ6UXN7 152 aa22.34■■□□□ 1.17
USP42-202ENST00000404008 TMEM144Q7Z5S9 345 aa22.34■■□□□ 1.17
USP42-202ENST00000404008 NPVFQ9HCQ7 196 aa22.34■■□□□ 1.17
USP42-202ENST00000404008 UFC1Q9Y3C8 167 aa22.34■■□□□ 1.17
USP42-202ENST00000404008 IGHV3OR16-8A0A075B7F1 116 aa22.33■■□□□ 1.17
USP42-202ENST00000404008 TMEM213A2RRL7 107 aa22.33■■□□□ 1.17
USP42-202ENST00000404008 YIF1AO95070 293 aa22.33■■□□□ 1.17
USP42-202ENST00000404008 CSN3P07498 182 aa22.33■■□□□ 1.17
USP42-202ENST00000404008 C9orf66Q5T8R8 295 aa22.33■■□□□ 1.17
USP42-202ENST00000404008 TRGV9Q99603 122 aa22.33■■□□□ 1.17
USP42-202ENST00000404008 ZFAND3Q9H8U3 227 aa22.33■■□□□ 1.17
USP42-202ENST00000404008 NBEAL1Q6ZS30 2694 aa22.32■■□□□ 1.16
USP42-202ENST00000404008 C2orf70A6NJV1 201 aa22.32■■□□□ 1.16
USP42-202ENST00000404008 G3V3Q6 166 aa22.32■■□□□ 1.16
USP42-202ENST00000404008 RPL12P30050 165 aaKnown RBP22.32■■□□□ 1.16
USP42-202ENST00000404008 ELLP55199 621 aaPredicted RBP22.32■■□□□ 1.16
USP42-202ENST00000404008 ZNF90Q03938 601 aa22.32■■□□□ 1.16
USP42-202ENST00000404008 TM4SF20Q53R12 229 aa22.32■■□□□ 1.16
USP42-202ENST00000404008 OXLD1Q5BKU9 147 aa22.32■■□□□ 1.16
USP42-202ENST00000404008 LILRB2Q8N423 598 aa22.32■■□□□ 1.16
USP42-202ENST00000404008 C20orf24Q9BUV8 137 aa22.32■■□□□ 1.16
USP42-202ENST00000404008 hCG_2014768A0A024R1R8 64 aa22.31■■□□□ 1.16
USP42-202ENST00000404008 SAP30O75446 220 aa22.31■■□□□ 1.16
USP42-202ENST00000404008 TOMM40O96008 361 aa22.31■■□□□ 1.16
USP42-202ENST00000404008 EDN2P20800 178 aa22.31■■□□□ 1.16
USP42-202ENST00000404008 VWC2Q2TAL6 325 aa22.31■■□□□ 1.16
USP42-202ENST00000404008 GPR61Q9BZJ8 451 aa22.31■■□□□ 1.16
USP42-202ENST00000404008 DAZ1Q9NQZ3 744 aaKnown RBP22.31■■□□□ 1.16
USP42-202ENST00000404008 NOTCH3Q9UM47 2321 aa22.31■■□□□ 1.16
USP42-202ENST00000404008 RD3LP0DJH9 198 aa22.3■■□□□ 1.16
USP42-202ENST00000404008 SAMD5Q5TGI4 173 aa22.3■■□□□ 1.16
USP42-202ENST00000404008 ADAMTSL5Q6ZMM2 481 aa22.3■■□□□ 1.16
USP42-202ENST00000404008 OR5C1Q8NGR4 320 aa22.3■■□□□ 1.16
USP42-202ENST00000404008 Q8WTZ3 238 aa22.3■■□□□ 1.16
USP42-202ENST00000404008 SIGLEC8Q9NYZ4 499 aa22.3■■□□□ 1.16
USP42-202ENST00000404008 G3V4G9 280 aa22.29■■□□□ 1.16
USP42-202ENST00000404008 K7EMT4 169 aa22.29■■□□□ 1.16
USP42-202ENST00000404008 WIPF1O43516 503 aa22.29■■□□□ 1.16
USP42-202ENST00000404008 PSG1P11464 419 aa22.29■■□□□ 1.16
USP42-202ENST00000404008 INSL3P51460 131 aa22.29■■□□□ 1.16
USP42-202ENST00000404008 ATP6V1FQ16864 119 aa22.29■■□□□ 1.16
USP42-202ENST00000404008 TEPPQ6URK8 271 aa22.29■■□□□ 1.16
USP42-202ENST00000404008 TMEM147Q9BVK8 224 aa22.29■■□□□ 1.16
USP42-202ENST00000404008 UQCC1Q9NVA1 299 aa22.29■■□□□ 1.16
USP42-202ENST00000404008 HSPB11Q9Y547 144 aa22.29■■□□□ 1.16
USP42-202ENST00000404008 FABP1P07148 127 aa22.28■■□□□ 1.16
USP42-202ENST00000404008 FOLR2P14207 255 aa22.28■■□□□ 1.16
USP42-202ENST00000404008 LSM4Q9Y4Z0 139 aaKnown RBP22.28■■□□□ 1.16
USP42-202ENST00000404008 ZNF207O43670 478 aaKnown RBP22.27■■□□□ 1.16
USP42-202ENST00000404008 CBLN1P23435 193 aa22.27■■□□□ 1.16
USP42-202ENST00000404008 GINS3Q9BRX5 216 aa22.27■■□□□ 1.16
USP42-202ENST00000404008 A0A1B0GVG6 124 aa22.26■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 102.6 ms