RNA–Protein interactions for RNA: ENST00000403461.5

CEACAM1-208, Transcript of carcinoembryonic antigen related cell adhesion molecule 1, human

TSL 1 (best) BASIC

Gene CEACAM1, Length 1,263 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CEACAM1-208	ENST00000403461	GINS3	Q9BRX5	216 aa		4.89	□□□□□ -1.63
CEACAM1-208	ENST00000403461	RNF126	Q9BV68	326 aa		4.89	□□□□□ -1.63
CEACAM1-208	ENST00000403461	RHPN1-AS1	Q9BWJ2	59 aa		4.89	□□□□□ -1.63
CEACAM1-208	ENST00000403461	HINT2	Q9BX68	163 aa		4.89	□□□□□ -1.63
CEACAM1-208	ENST00000403461	SMPX	Q9UHP9	88 aa		4.89	□□□□□ -1.63
CEACAM1-208	ENST00000403461	ANXA10	Q9UJ72	324 aa		4.89	□□□□□ -1.63
CEACAM1-208	ENST00000403461	IGHV3OR16-8	A0A075B7F1	116 aa		4.88	□□□□□ -1.63
CEACAM1-208	ENST00000403461	IGKV1D-8	A0A087WSZ0	117 aa		4.88	□□□□□ -1.63
CEACAM1-208	ENST00000403461	TRAV14DV4	A0A0A6YYC5	116 aa		4.88	□□□□□ -1.63
CEACAM1-208	ENST00000403461	IGKV1D-13	A0A0B4J2D9	117 aa		4.88	□□□□□ -1.63
CEACAM1-208	ENST00000403461	CHEK1	O14757	476 aa		4.88	□□□□□ -1.63
CEACAM1-208	ENST00000403461	GNAO1	P09471	354 aa		4.88	□□□□□ -1.63
CEACAM1-208	ENST00000403461	IGKV1-13	P0DP09	117 aa		4.88	□□□□□ -1.63
CEACAM1-208	ENST00000403461	SPP1	P10451	314 aa		4.88	□□□□□ -1.63
CEACAM1-208	ENST00000403461	MLLT11	Q13015	90 aa	Predicted RBP	4.88	□□□□□ -1.63
CEACAM1-208	ENST00000403461	CDNF	Q49AH0	187 aa		4.88	□□□□□ -1.63
CEACAM1-208	ENST00000403461	AARD	Q4LEZ3	155 aa		4.88	□□□□□ -1.63
CEACAM1-208	ENST00000403461	AADACL3	Q5VUY0	350 aa		4.88	□□□□□ -1.63
CEACAM1-208	ENST00000403461	MORN3	Q6PF18	240 aa	Predicted RBP	4.88	□□□□□ -1.63
CEACAM1-208	ENST00000403461	TMEM91	Q6ZNR0	172 aa		4.88	□□□□□ -1.63
CEACAM1-208	ENST00000403461	GBGT1	Q8N5D6	347 aa		4.88	□□□□□ -1.63
CEACAM1-208	ENST00000403461	POM121L12	Q8N7R1	296 aa		4.88	□□□□□ -1.63
CEACAM1-208	ENST00000403461	TSPAN14	Q8NG11	270 aa		4.88	□□□□□ -1.63
CEACAM1-208	ENST00000403461	OR1L8	Q8NGR8	309 aa		4.88	□□□□□ -1.63
CEACAM1-208	ENST00000403461	OR13F1	Q8NGS4	319 aa		4.88	□□□□□ -1.63
CEACAM1-208	ENST00000403461	TMEM56	Q96MV1	263 aa		4.88	□□□□□ -1.63
CEACAM1-208	ENST00000403461	NDUFAF3	Q9BU61	184 aa		4.88	□□□□□ -1.63
CEACAM1-208	ENST00000403461	TPPP3	Q9BW30	176 aa		4.88	□□□□□ -1.63
CEACAM1-208	ENST00000403461	TMEM231	Q9H6L2	316 aa		4.88	□□□□□ -1.63
CEACAM1-208	ENST00000403461	COMMD9	Q9P000	198 aa		4.88	□□□□□ -1.63
CEACAM1-208	ENST00000403461	LSM2	Q9Y333	95 aa	Known RBP	4.88	□□□□□ -1.63
CEACAM1-208	ENST00000403461	TPRKB	Q9Y3C4	175 aa		4.88	□□□□□ -1.63
CEACAM1-208	ENST00000403461	ETV7	Q9Y603	341 aa		4.88	□□□□□ -1.63
CEACAM1-208	ENST00000403461	F11R	Q9Y624	299 aa	Known RBP	4.88	□□□□□ -1.63
CEACAM1-208	ENST00000403461	ABCA13	Q86UQ4	5058 aa		4.88	□□□□□ -1.63
CEACAM1-208	ENST00000403461	DEFB131B	A0A096LNP1	70 aa		4.87	□□□□□ -1.63
CEACAM1-208	ENST00000403461	IGHV3-49	A0A0A0MS15	119 aa		4.87	□□□□□ -1.63
CEACAM1-208	ENST00000403461	IGHV3-21	A0A0B4J1V1	117 aa		4.87	□□□□□ -1.63
CEACAM1-208	ENST00000403461	TRAV2	A0A0B4J234	112 aa		4.87	□□□□□ -1.63
CEACAM1-208	ENST00000403461	TRAV1-2	A0A0B4J238	106 aa		4.87	□□□□□ -1.63
CEACAM1-208	ENST00000403461		A0A1B0GVY2	172 aa		4.87	□□□□□ -1.63
CEACAM1-208	ENST00000403461	SULT1C2	O00338	296 aa		4.87	□□□□□ -1.63
CEACAM1-208	ENST00000403461	ST8SIA3	O43173	380 aa		4.87	□□□□□ -1.63
CEACAM1-208	ENST00000403461	SCGB2A1	O75556	95 aa		4.87	□□□□□ -1.63
CEACAM1-208	ENST00000403461	SNAPC5	O75971	98 aa		4.87	□□□□□ -1.63
CEACAM1-208	ENST00000403461	IFNA10	P01566	189 aa		4.87	□□□□□ -1.63
CEACAM1-208	ENST00000403461	IFNA21	P01568	189 aa		4.87	□□□□□ -1.63
CEACAM1-208	ENST00000403461	IFNA17	P01571	189 aa		4.87	□□□□□ -1.63
CEACAM1-208	ENST00000403461	AMBP	P02760	352 aa		4.87	□□□□□ -1.63
CEACAM1-208	ENST00000403461	SERPINE2	P07093	398 aa		4.87	□□□□□ -1.63
CEACAM1-208	ENST00000403461	RAB3B	P20337	219 aa		4.87	□□□□□ -1.63
CEACAM1-208	ENST00000403461	NPY1R	P25929	384 aa		4.87	□□□□□ -1.63
CEACAM1-208	ENST00000403461	FCGR2C	P31995	323 aa		4.87	□□□□□ -1.63
CEACAM1-208	ENST00000403461	DEFB131A	P59861	70 aa		4.87	□□□□□ -1.63
CEACAM1-208	ENST00000403461	RPL36A	P83881	106 aa	Known RBP	4.87	□□□□□ -1.63
CEACAM1-208	ENST00000403461	FABP5	Q01469	135 aa		4.87	□□□□□ -1.63
CEACAM1-208	ENST00000403461	WT1-AS	Q06250	92 aa		4.87	□□□□□ -1.63
CEACAM1-208	ENST00000403461	EIF4EBP1	Q13541	118 aa	Predicted RBP	4.87	□□□□□ -1.63
CEACAM1-208	ENST00000403461	POU2AF1	Q16633	256 aa		4.87	□□□□□ -1.63
CEACAM1-208	ENST00000403461	LAIR2	Q6ISS4	152 aa		4.87	□□□□□ -1.63
CEACAM1-208	ENST00000403461	ZNF773	Q6PK81	442 aa		4.87	□□□□□ -1.63
CEACAM1-208	ENST00000403461		Q6ZTC4	211 aa		4.87	□□□□□ -1.63
CEACAM1-208	ENST00000403461	TCF24	Q7RTU0	167 aa		4.87	□□□□□ -1.63
CEACAM1-208	ENST00000403461	UBE2DNL	Q8IWF7	75 aa		4.87	□□□□□ -1.63
CEACAM1-208	ENST00000403461		Q8NAQ8	132 aa		4.87	□□□□□ -1.63
CEACAM1-208	ENST00000403461	DUSP18	Q8NEJ0	188 aa		4.87	□□□□□ -1.63
CEACAM1-208	ENST00000403461	OR51H1	Q8NH63	302 aa		4.87	□□□□□ -1.63
CEACAM1-208	ENST00000403461	NARS2	Q96I59	477 aa	Known RBP	4.87	□□□□□ -1.63
CEACAM1-208	ENST00000403461	CHRDL1	Q9BU40	450 aa		4.87	□□□□□ -1.63
CEACAM1-208	ENST00000403461	CCL28	Q9NRJ3	127 aa		4.87	□□□□□ -1.63
CEACAM1-208	ENST00000403461	FKBP11	Q9NYL4	201 aa		4.87	□□□□□ -1.63
CEACAM1-208	ENST00000403461	RABAC1	Q9UI14	185 aa		4.87	□□□□□ -1.63
CEACAM1-208	ENST00000403461	PRND	Q9UKY0	176 aa		4.87	□□□□□ -1.63
CEACAM1-208	ENST00000403461	TMEM235	A6NFC5	223 aa		4.86	□□□□□ -1.63
CEACAM1-208	ENST00000403461	PRAC2	D3DTV9	90 aa		4.86	□□□□□ -1.63
CEACAM1-208	ENST00000403461	GNG7	O60262	68 aa		4.86	□□□□□ -1.63
CEACAM1-208	ENST00000403461	PPY	P01298	95 aa		4.86	□□□□□ -1.63
CEACAM1-208	ENST00000403461	EIF2B2	P49770	351 aa	Known RBP	4.86	□□□□□ -1.63
CEACAM1-208	ENST00000403461	OR10A3	P58181	314 aa		4.86	□□□□□ -1.63
CEACAM1-208	ENST00000403461	FXYD4	P59646	89 aa		4.86	□□□□□ -1.63
CEACAM1-208	ENST00000403461	ERVFC1-1	P60608	527 aa		4.86	□□□□□ -1.63
CEACAM1-208	ENST00000403461	HERV-K104	P61576	105 aa		4.86	□□□□□ -1.63
CEACAM1-208	ENST00000403461	LEMD1	Q68G75	181 aa		4.86	□□□□□ -1.63
CEACAM1-208	ENST00000403461	CCDC190	Q86UF4	302 aa		4.86	□□□□□ -1.63
CEACAM1-208	ENST00000403461	TPRA1	Q86W33	373 aa		4.86	□□□□□ -1.63
CEACAM1-208	ENST00000403461	OR10W1	Q8NGF6	305 aa		4.86	□□□□□ -1.63
CEACAM1-208	ENST00000403461	OR1P1	Q8NH06	330 aa		4.86	□□□□□ -1.63
CEACAM1-208	ENST00000403461	SLC25A46	Q96AG3	418 aa		4.86	□□□□□ -1.63
CEACAM1-208	ENST00000403461	DGCR14	Q96DF8	476 aa	Known RBP	4.86	□□□□□ -1.63
CEACAM1-208	ENST00000403461	OR10C1	Q96KK4	312 aa		4.86	□□□□□ -1.63
CEACAM1-208	ENST00000403461	TSC22D3	Q99576	134 aa		4.86	□□□□□ -1.63
CEACAM1-208	ENST00000403461	MGLL	Q99685	303 aa		4.86	□□□□□ -1.63
CEACAM1-208	ENST00000403461	MS4A6A	Q9H2W1	248 aa		4.86	□□□□□ -1.63
CEACAM1-208	ENST00000403461	FAM212B	Q9NTI7	297 aa	Predicted RBP	4.86	□□□□□ -1.63
CEACAM1-208	ENST00000403461	TBC1D24	Q9ULP9	559 aa		4.86	□□□□□ -1.63
CEACAM1-208	ENST00000403461	OR51B2	Q9Y5P1	312 aa		4.86	□□□□□ -1.63
CEACAM1-208	ENST00000403461	IGHV3OR16-13	A0A075B7E8	117 aa		4.85	□□□□□ -1.63
CEACAM1-208	ENST00000403461	IGHV3-74	A0A0B4J1X5	117 aa		4.85	□□□□□ -1.63
CEACAM1-208	ENST00000403461	TRAV3	A0A0B4J244	114 aa		4.85	□□□□□ -1.63
CEACAM1-208	ENST00000403461	TEX50	A0A1B0GTY4	177 aa		4.85	□□□□□ -1.63

Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms