RNA–Protein interactions for RNA: ENST00000401473.7

HMGA1-204, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-204ENST00000401473 IGKV1D-37A0A075B6S9 117 aa12.2□□□□□ -0.46
HMGA1-204ENST00000401473 EWSR1Q01844 656 aaKnown RBP eCLIP12.2□□□□□ -0.46
HMGA1-204ENST00000401473 RPEL1Q2QD12 228 aa12.2□□□□□ -0.46
HMGA1-204ENST00000401473 SPSB3Q6PJ21 355 aa12.2□□□□□ -0.46
HMGA1-204ENST00000401473 NUPL2O15504 423 aaKnown RBP12.19□□□□□ -0.46
HMGA1-204ENST00000401473 ZP3P21754 424 aa12.19□□□□□ -0.46
HMGA1-204ENST00000401473 SYNJ2BPP57105 145 aa12.19□□□□□ -0.46
HMGA1-204ENST00000401473 UNQ9165/PRO28630Q6UXU0 137 aa12.19□□□□□ -0.46
HMGA1-204ENST00000401473 GPHB5Q86YW7 130 aa12.19□□□□□ -0.46
HMGA1-204ENST00000401473 GAR1Q9NY12 217 aaKnown RBP12.19□□□□□ -0.46
HMGA1-204ENST00000401473 RPL12P30050 165 aaKnown RBP12.19□□□□□ -0.46
HMGA1-204ENST00000401473 OR10J1P30954 320 aa12.19□□□□□ -0.46
HMGA1-204ENST00000401473 SLC38A11Q08AI6 406 aa12.19□□□□□ -0.46
HMGA1-204ENST00000401473 WFDC9Q8NEX5 89 aa12.19□□□□□ -0.46
HMGA1-204ENST00000401473 OR11H4Q8NGC9 324 aa12.19□□□□□ -0.46
HMGA1-204ENST00000401473 SLC35E1Q96K37 410 aa12.19□□□□□ -0.46
HMGA1-204ENST00000401473 SLC25A31Q9H0C2 315 aa12.19□□□□□ -0.46
HMGA1-204ENST00000401473 DLK1P80370 383 aa12.18□□□□□ -0.46
HMGA1-204ENST00000401473 CD300CQ08708 224 aa12.18□□□□□ -0.46
HMGA1-204ENST00000401473 TIGITQ495A1 244 aa12.18□□□□□ -0.46
HMGA1-204ENST00000401473 TREML4Q6UXN2 200 aa12.18□□□□□ -0.46
HMGA1-204ENST00000401473 STX12Q86Y82 276 aa12.18□□□□□ -0.46
HMGA1-204ENST00000401473 IGHV3OR16-8A0A075B7F1 116 aa12.17□□□□□ -0.46
HMGA1-204ENST00000401473 S100A11P31949 105 aa12.17□□□□□ -0.46
HMGA1-204ENST00000401473 ZNF90Q03938 601 aa12.17□□□□□ -0.46
HMGA1-204ENST00000401473 TMEM144Q7Z5S9 345 aa12.17□□□□□ -0.46
HMGA1-204ENST00000401473 ZNF546Q86UE3 836 aa12.17□□□□□ -0.46
HMGA1-204ENST00000401473 OR5C1Q8NGR4 320 aa12.17□□□□□ -0.46
HMGA1-204ENST00000401473 RCC1LQ96I51 464 aaKnown RBP12.17□□□□□ -0.46
HMGA1-204ENST00000401473 GGACTQ9BVM4 153 aa12.17□□□□□ -0.46
HMGA1-204ENST00000401473 NPVFQ9HCQ7 196 aa12.17□□□□□ -0.46
HMGA1-204ENST00000401473 SORL1Q92673 2214 aa12.17□□□□□ -0.46
HMGA1-204ENST00000401473 TRAV30A0A087WSZ9 112 aa12.17□□□□□ -0.46
HMGA1-204ENST00000401473 SMCO3A2RU48 225 aa12.17□□□□□ -0.46
HMGA1-204ENST00000401473 THAP8Q8NA92 274 aa12.17□□□□□ -0.46
HMGA1-204ENST00000401473 FXYD6-FXYD2A0A087WZ82 144 aa12.16□□□□□ -0.46
HMGA1-204ENST00000401473 ZNF320A2RRD8 509 aa12.16□□□□□ -0.46
HMGA1-204ENST00000401473 ZFP92A6NM28 416 aa12.16□□□□□ -0.46
HMGA1-204ENST00000401473 FNDC10F2Z333 226 aa12.16□□□□□ -0.46
HMGA1-204ENST00000401473 EDN2P20800 178 aa12.16□□□□□ -0.46
HMGA1-204ENST00000401473 HBG1P69891 147 aa12.16□□□□□ -0.46
HMGA1-204ENST00000401473 HBG2P69892 147 aa12.16□□□□□ -0.46
HMGA1-204ENST00000401473 BAXQ07812 192 aa12.16□□□□□ -0.46
HMGA1-204ENST00000401473 IL34Q6ZMJ4 242 aa12.16□□□□□ -0.46
HMGA1-204ENST00000401473 TMEM182Q6ZP80 229 aaPredicted RBP12.16□□□□□ -0.46
HMGA1-204ENST00000401473 TNFSF18Q9UNG2 199 aa12.16□□□□□ -0.46
HMGA1-204ENST00000401473 RNF222A6NCQ9 220 aa12.15□□□□□ -0.46
HMGA1-204ENST00000401473 OVOL1O14753 267 aa12.15□□□□□ -0.46
HMGA1-204ENST00000401473 AKR1C1Q04828 323 aa12.15□□□□□ -0.46
HMGA1-204ENST00000401473 VWC2Q2TAL6 325 aa12.15□□□□□ -0.46
HMGA1-204ENST00000401473 FAM106AQ4KMX7 169 aa12.15□□□□□ -0.46
HMGA1-204ENST00000401473 TOMM20LQ6UXN7 152 aa12.15□□□□□ -0.46
HMGA1-204ENST00000401473 AQP10Q96PS8 301 aa12.15□□□□□ -0.46
HMGA1-204ENST00000401473 LSM4Q9Y4Z0 139 aaKnown RBP12.15□□□□□ -0.46
HMGA1-204ENST00000401473 HSPB11Q9Y547 144 aa12.15□□□□□ -0.46
HMGA1-204ENST00000401473 PUS1Q9Y606 427 aaKnown RBP eCLIP12.15□□□□□ -0.46
HMGA1-204ENST00000401473 NDUFA4O00483 81 aa12.14□□□□□ -0.47
HMGA1-204ENST00000401473 YIF1AO95070 293 aa12.14□□□□□ -0.47
HMGA1-204ENST00000401473 PSG1P11464 419 aa12.14□□□□□ -0.47
HMGA1-204ENST00000401473 GATA2P23769 480 aaPredicted RBP12.14□□□□□ -0.47
HMGA1-204ENST00000401473 YPEL3P61236 119 aaPredicted RBP12.14□□□□□ -0.47
HMGA1-204ENST00000401473 RELQ04864 619 aaPredicted RBP12.14□□□□□ -0.47
HMGA1-204ENST00000401473 CLINT1Q14677 625 aa12.14□□□□□ -0.47
HMGA1-204ENST00000401473 TM4SF20Q53R12 229 aa12.14□□□□□ -0.47
HMGA1-204ENST00000401473 C1QL4Q86Z23 238 aa12.14□□□□□ -0.47
HMGA1-204ENST00000401473 TCTE3Q8IZS6 198 aa12.14□□□□□ -0.47
HMGA1-204ENST00000401473 LILRB2Q8N423 598 aa12.14□□□□□ -0.47
HMGA1-204ENST00000401473 OR9G4Q8NGQ1 327 aa12.14□□□□□ -0.47
HMGA1-204ENST00000401473 OR1S2Q8NGQ3 325 aa12.14□□□□□ -0.47
HMGA1-204ENST00000401473 LGALS9O00182 355 aa12.14□□□□□ -0.47
HMGA1-204ENST00000401473 CD33P20138 364 aa12.14□□□□□ -0.47
HMGA1-204ENST00000401473 ADAMTSL5Q6ZMM2 481 aa12.14□□□□□ -0.47
HMGA1-204ENST00000401473 ZNF600Q6ZNG1 722 aa12.14□□□□□ -0.47
HMGA1-204ENST00000401473 TRGV9Q99603 122 aa12.14□□□□□ -0.47
HMGA1-204ENST00000401473 NEURL2Q9BR09 285 aa12.14□□□□□ -0.47
HMGA1-204ENST00000401473 SMIM3Q9BZL3 60 aa12.14□□□□□ -0.47
HMGA1-204ENST00000401473 ZFAND3Q9H8U3 227 aa12.14□□□□□ -0.47
HMGA1-204ENST00000401473 WFDC1Q9HC57 220 aa12.14□□□□□ -0.47
HMGA1-204ENST00000401473 UQCC1Q9NVA1 299 aa12.14□□□□□ -0.47
HMGA1-204ENST00000401473 RD3LP0DJH9 198 aa12.13□□□□□ -0.47
HMGA1-204ENST00000401473 ATP6V1FQ16864 119 aa12.13□□□□□ -0.47
HMGA1-204ENST00000401473 TEPPQ6URK8 271 aa12.13□□□□□ -0.47
HMGA1-204ENST00000401473 REC114Q7Z4M0 266 aa12.13□□□□□ -0.47
HMGA1-204ENST00000401473 AKAP14Q86UN6 197 aa12.13□□□□□ -0.47
HMGA1-204ENST00000401473 TMEM190Q8WZ59 177 aa12.13□□□□□ -0.47
HMGA1-204ENST00000401473 TMEM213A2RRL7 107 aa12.12□□□□□ -0.47
HMGA1-204ENST00000401473 ARPC5O15511 151 aa12.12□□□□□ -0.47
HMGA1-204ENST00000401473 ZNF207O43670 478 aaKnown RBP12.12□□□□□ -0.47
HMGA1-204ENST00000401473 SCAF4O95104 1147 aaKnown RBP12.12□□□□□ -0.47
HMGA1-204ENST00000401473 IGLL1P15814 213 aa12.12□□□□□ -0.47
HMGA1-204ENST00000401473 AP2S1P53680 142 aaPredicted RBP12.12□□□□□ -0.47
HMGA1-204ENST00000401473 INO80EQ8NBZ0 244 aaPredicted RBP12.12□□□□□ -0.47
HMGA1-204ENST00000401473 C20orf24Q9BUV8 137 aa12.12□□□□□ -0.47
HMGA1-204ENST00000401473 TMEM147Q9BVK8 224 aa12.12□□□□□ -0.47
HMGA1-204ENST00000401473 WDR83OSQ9Y284 106 aa12.12□□□□□ -0.47
HMGA1-204ENST00000401473 TOMM40O96008 361 aa12.12□□□□□ -0.47
HMGA1-204ENST00000401473 CSN3P07498 182 aa12.12□□□□□ -0.47
HMGA1-204ENST00000401473 OR2F1Q13607 317 aa12.12□□□□□ -0.47
HMGA1-204ENST00000401473 Q8WTZ3 238 aa12.12□□□□□ -0.47
HMGA1-204ENST00000401473 MGST2Q99735 147 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms