RNA–Protein interactions for RNA: ENST00000400060.8

PTPRM-203, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 5 BASIC

Gene PTPRM, Length 5,030 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-203ENST00000400060 MOGAT3Q86VF5 341 aa8.26□□□□□ -1.09
PTPRM-203ENST00000400060 FOXA2Q9Y261 457 aaPredicted RBP8.26□□□□□ -1.09
PTPRM-203ENST00000400060 LOXL2Q9Y4K0 774 aa8.26□□□□□ -1.09
PTPRM-203ENST00000400060 ALPK3Q96L96 1907 aa8.26□□□□□ -1.09
PTPRM-203ENST00000400060 TRBV7-9A0A0J9YWB2 115 aa8.26□□□□□ -1.09
PTPRM-203ENST00000400060 MOSP00540 346 aa8.26□□□□□ -1.09
PTPRM-203ENST00000400060 IGKV1D-33P01593 117 aa8.26□□□□□ -1.09
PTPRM-203ENST00000400060 IGKV1-33P01594 117 aa8.26□□□□□ -1.09
PTPRM-203ENST00000400060 PATE4P0C8F1 98 aa8.26□□□□□ -1.09
PTPRM-203ENST00000400060 CRYGSP22914 178 aa8.26□□□□□ -1.09
PTPRM-203ENST00000400060 VDAC2P45880 294 aaPredicted RBP8.26□□□□□ -1.09
PTPRM-203ENST00000400060 C18orf15Q96N68 181 aa8.26□□□□□ -1.09
PTPRM-203ENST00000400060 GREB1Q4ZG55 1949 aa8.26□□□□□ -1.09
PTPRM-203ENST00000400060 PLAURQ03405 335 aa8.26□□□□□ -1.09
PTPRM-203ENST00000400060 ADIPOQQ15848 244 aa8.26□□□□□ -1.09
PTPRM-203ENST00000400060 C3AR1Q16581 482 aa8.26□□□□□ -1.09
PTPRM-203ENST00000400060 SPANXN1Q5VSR9 72 aa8.26□□□□□ -1.09
PTPRM-203ENST00000400060 FOXL2NBQ6ZUU3 175 aa8.26□□□□□ -1.09
PTPRM-203ENST00000400060 GOLT1AQ6ZVE7 132 aa8.26□□□□□ -1.09
PTPRM-203ENST00000400060 NEGR1Q7Z3B1 354 aa8.26□□□□□ -1.09
PTPRM-203ENST00000400060 Q9H3A6 140 aa8.26□□□□□ -1.09
PTPRM-203ENST00000400060 TRBV20OR9-2A0A075B6H5 130 aa8.26□□□□□ -1.09
PTPRM-203ENST00000400060 C15orf62A8K5M9 175 aa8.26□□□□□ -1.09
PTPRM-203ENST00000400060 HERV-K104P63124 156 aa8.26□□□□□ -1.09
PTPRM-203ENST00000400060 SCGB3A1Q96QR1 104 aa8.26□□□□□ -1.09
PTPRM-203ENST00000400060 FBXL15Q9H469 300 aa8.26□□□□□ -1.09
PTPRM-203ENST00000400060 MBNL3Q9NUK0 354 aaKnown RBP8.26□□□□□ -1.09
PTPRM-203ENST00000400060 TRAV8-1A0A0A6YYK1 113 aa8.25□□□□□ -1.09
PTPRM-203ENST00000400060 PRR33A8MZF0 331 aa8.25□□□□□ -1.09
PTPRM-203ENST00000400060 MFAP4P55083 255 aa8.25□□□□□ -1.09
PTPRM-203ENST00000400060 ZNF114Q8NC26 417 aa8.25□□□□□ -1.09
PTPRM-203ENST00000400060 REPIN1Q9BWE0 567 aaKnown RBP8.25□□□□□ -1.09
PTPRM-203ENST00000400060 RAB1BQ9H0U4 201 aa8.25□□□□□ -1.09
PTPRM-203ENST00000400060 A0A0G2JRQ6 117 aa8.25□□□□□ -1.09
PTPRM-203ENST00000400060 TCRBV4S1A1TA0A5B7 111 aa8.25□□□□□ -1.09
PTPRM-203ENST00000400060 C12orf77C9JDV5 145 aa8.25□□□□□ -1.09
PTPRM-203ENST00000400060 GUSBP11Q6P575 273 aa8.25□□□□□ -1.09
PTPRM-203ENST00000400060 OSR1Q8TAX0 266 aaPredicted RBP8.25□□□□□ -1.09
PTPRM-203ENST00000400060 C12orf49Q9H741 205 aa8.25□□□□□ -1.09
PTPRM-203ENST00000400060 TRPM7Q96QT4 1865 aa8.25□□□□□ -1.09
PTPRM-203ENST00000400060 FOXH1O75593 365 aa8.25□□□□□ -1.09
PTPRM-203ENST00000400060 PRTN3P24158 256 aa8.25□□□□□ -1.09
PTPRM-203ENST00000400060 FOXI1Q12951 378 aa8.25□□□□□ -1.09
PTPRM-203ENST00000400060 TEX45Q8NA69 505 aa8.25□□□□□ -1.09
PTPRM-203ENST00000400060 MAP1BP46821 2468 aaKnown RBP8.24□□□□□ -1.09
PTPRM-203ENST00000400060 IGKV3D-11A0A0A0MRZ8 115 aa8.24□□□□□ -1.09
PTPRM-203ENST00000400060 IGKV1-12A0A0C4DH73 117 aa8.24□□□□□ -1.09
PTPRM-203ENST00000400060 ZNF815PA8K554 130 aa8.24□□□□□ -1.09
PTPRM-203ENST00000400060 IGLL5B9A064 214 aa8.24□□□□□ -1.09
PTPRM-203ENST00000400060 H7C1H1 209 aa8.24□□□□□ -1.09
PTPRM-203ENST00000400060 IGKV1D-12P01611 117 aa8.24□□□□□ -1.09
PTPRM-203ENST00000400060 TNFRSF6BO95407 300 aa8.24□□□□□ -1.09
PTPRM-203ENST00000400060 PRCDQ00LT1 54 aa8.24□□□□□ -1.09
PTPRM-203ENST00000400060 ZNF329Q86UD4 541 aa8.24□□□□□ -1.09
PTPRM-203ENST00000400060 TMSB15BA0A087X1C1 80 aa8.24□□□□□ -1.09
PTPRM-203ENST00000400060 H3BMM0 161 aa8.24□□□□□ -1.09
PTPRM-203ENST00000400060 HLA-DRB4P13762 266 aa8.24□□□□□ -1.09
PTPRM-203ENST00000400060 PRDX2P32119 198 aa8.24□□□□□ -1.09
PTPRM-203ENST00000400060 CD69Q07108 199 aa8.24□□□□□ -1.09
PTPRM-203ENST00000400060 KLRB1Q12918 225 aa8.24□□□□□ -1.09
PTPRM-203ENST00000400060 CIRBPQ14011 172 aaKnown RBP8.24□□□□□ -1.09
PTPRM-203ENST00000400060 TMEM155Q4W5P6 130 aa8.24□□□□□ -1.09
PTPRM-203ENST00000400060 SPATA12Q7Z6I5 190 aa8.24□□□□□ -1.09
PTPRM-203ENST00000400060 FAM90A1Q86YD7 464 aa8.24□□□□□ -1.09
PTPRM-203ENST00000400060 CT55Q8WUE5 264 aa8.24□□□□□ -1.09
PTPRM-203ENST00000400060 UBE2WQ96B02 151 aa8.24□□□□□ -1.09
PTPRM-203ENST00000400060 HLA-DRB4X5D2U9 266 aa8.24□□□□□ -1.09
PTPRM-203ENST00000400060 K7EN84 100 aa8.24□□□□□ -1.09
PTPRM-203ENST00000400060 IGHV4-34P06331 123 aa8.24□□□□□ -1.09
PTPRM-203ENST00000400060 PRSS12P56730 875 aa8.24□□□□□ -1.09
PTPRM-203ENST00000400060 C12orf74Q32Q52 190 aa8.24□□□□□ -1.09
PTPRM-203ENST00000400060 UCN2Q96RP3 112 aa8.24□□□□□ -1.09
PTPRM-203ENST00000400060 H7C2G1 150 aa8.23□□□□□ -1.09
PTPRM-203ENST00000400060 GATA2P23769 480 aaPredicted RBP8.23□□□□□ -1.09
PTPRM-203ENST00000400060 DUTP33316 252 aaKnown RBP8.23□□□□□ -1.09
PTPRM-203ENST00000400060 ZNF747Q9BV97 191 aa8.23□□□□□ -1.09
PTPRM-203ENST00000400060 NPIPB6E9PJ23 425 aa8.23□□□□□ -1.09
PTPRM-203ENST00000400060 LAGE3Q14657 143 aa8.23□□□□□ -1.09
PTPRM-203ENST00000400060 C16orf47Q6ZP98 133 aaPredicted RBP8.23□□□□□ -1.09
PTPRM-203ENST00000400060 GTSCR1Q86UQ5 136 aa8.23□□□□□ -1.09
PTPRM-203ENST00000400060 SMRP1Q8NCR6 262 aa8.23□□□□□ -1.09
PTPRM-203ENST00000400060 SARAFQ96BY9 339 aa8.23□□□□□ -1.09
PTPRM-203ENST00000400060 NGBQ9NPG2 151 aa8.23□□□□□ -1.09
PTPRM-203ENST00000400060 NDUFA3O95167 84 aa8.23□□□□□ -1.09
PTPRM-203ENST00000400060 ATP5G1P05496 136 aa8.23□□□□□ -1.09
PTPRM-203ENST00000400060 ACYP1P07311 99 aa8.23□□□□□ -1.09
PTPRM-203ENST00000400060 ATP5G2Q06055 141 aa8.23□□□□□ -1.09
PTPRM-203ENST00000400060 SPATA31B1PQ5VZV4 182 aa8.23□□□□□ -1.09
PTPRM-203ENST00000400060 PRSS57Q6UWY2 283 aa8.23□□□□□ -1.09
PTPRM-203ENST00000400060 Q6ZRM9 215 aa8.23□□□□□ -1.09
PTPRM-203ENST00000400060 FAM110AQ9BQ89 295 aa8.23□□□□□ -1.09
PTPRM-203ENST00000400060 ZNF106Q9H2Y7 1883 aaKnown RBP8.23□□□□□ -1.09
PTPRM-203ENST00000400060 TRAV24A0A0B4J272 114 aa8.23□□□□□ -1.09
PTPRM-203ENST00000400060 MRPL23Q16540 153 aaKnown RBP8.23□□□□□ -1.09
PTPRM-203ENST00000400060 CHCHD2P9Q5T1J5 151 aaPredicted RBP8.23□□□□□ -1.09
PTPRM-203ENST00000400060 COLCA1Q6ZS62 124 aa8.23□□□□□ -1.09
PTPRM-203ENST00000400060 FCGR2BP31994 310 aaPredicted RBP8.22□□□□□ -1.09
PTPRM-203ENST00000400060 MPV17P39210 176 aa8.22□□□□□ -1.09
PTPRM-203ENST00000400060 TEN1Q86WV5 123 aa8.22□□□□□ -1.09
PTPRM-203ENST00000400060 IGKV1-27A0A075B6S5 117 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms