RNA–Protein interactions for RNA: ENST00000399050.8

CTNND1-205, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 6,313 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-205ENST00000399050 NUP35Q8NFH5 326 aa7.17□□□□□ -1.26
CTNND1-205ENST00000399050 SNHG12Q9BXW3 62 aa7.17□□□□□ -1.26
CTNND1-205ENST00000399050 PNRC2Q9NPJ4 139 aaKnown RBP7.17□□□□□ -1.26
CTNND1-205ENST00000399050 NXT2Q9NPJ8 142 aaKnown RBP7.17□□□□□ -1.26
CTNND1-205ENST00000399050 LINC00312Q9Y6C7 94 aa7.17□□□□□ -1.26
CTNND1-205ENST00000399050 C5orf63A6NC05 138 aa7.17□□□□□ -1.26
CTNND1-205ENST00000399050 FABP5P3A8MUU1 101 aa7.17□□□□□ -1.26
CTNND1-205ENST00000399050 TMEM262E9PQX1 116 aa7.17□□□□□ -1.26
CTNND1-205ENST00000399050 FTH1P19P0C7X4 201 aa7.17□□□□□ -1.26
CTNND1-205ENST00000399050 PRB4P10163 310 aaPredicted RBP7.17□□□□□ -1.26
CTNND1-205ENST00000399050 LY6EQ16553 131 aa7.17□□□□□ -1.26
CTNND1-205ENST00000399050 MAJINQ3KP22 176 aa7.17□□□□□ -1.26
CTNND1-205ENST00000399050 SEPSECSQ9HD40 501 aaKnown RBP7.17□□□□□ -1.26
CTNND1-205ENST00000399050 BRWD3Q6RI45 1802 aa7.17□□□□□ -1.26
CTNND1-205ENST00000399050 PSMB11A5LHX3 300 aa7.17□□□□□ -1.26
CTNND1-205ENST00000399050 TMEM14EPQ6UXP3 125 aa7.17□□□□□ -1.26
CTNND1-205ENST00000399050 NABP1Q96AH0 204 aa7.17□□□□□ -1.26
CTNND1-205ENST00000399050 DUX5Q96PT3 197 aa7.17□□□□□ -1.26
CTNND1-205ENST00000399050 MRPS18CQ9Y3D5 142 aaKnown RBP7.17□□□□□ -1.26
CTNND1-205ENST00000399050 GTSCR1Q86UQ5 136 aa7.17□□□□□ -1.26
CTNND1-205ENST00000399050 OR10W1Q8NGF6 305 aa7.17□□□□□ -1.26
CTNND1-205ENST00000399050 ARPC1AQ92747 370 aa7.17□□□□□ -1.26
CTNND1-205ENST00000399050 ZNF581Q9P0T4 197 aa7.17□□□□□ -1.26
CTNND1-205ENST00000399050 FREM3P0C091 2139 aa7.17□□□□□ -1.26
CTNND1-205ENST00000399050 LHX2P50458 406 aa7.16□□□□□ -1.26
CTNND1-205ENST00000399050 FGF11Q92914 225 aa7.16□□□□□ -1.26
CTNND1-205ENST00000399050 KLHDC3Q9BQ90 382 aa7.16□□□□□ -1.26
CTNND1-205ENST00000399050 TNFRSF18Q9Y5U5 241 aa7.16□□□□□ -1.26
CTNND1-205ENST00000399050 A8MWV9 139 aa7.16□□□□□ -1.26
CTNND1-205ENST00000399050 SNRPD3P62318 126 aaKnown RBP7.16□□□□□ -1.26
CTNND1-205ENST00000399050 RAX2Q96IS3 184 aa7.16□□□□□ -1.26
CTNND1-205ENST00000399050 MPDZO75970 2070 aa7.16□□□□□ -1.26
CTNND1-205ENST00000399050 EFNA2O43921 213 aa7.16□□□□□ -1.26
CTNND1-205ENST00000399050 PPIFP30405 207 aaKnown RBP7.16□□□□□ -1.26
CTNND1-205ENST00000399050 C1orf162Q8NEQ5 155 aaPredicted RBP7.16□□□□□ -1.26
CTNND1-205ENST00000399050 JMJD8Q96S16 334 aa7.16□□□□□ -1.26
CTNND1-205ENST00000399050 GTSF1LQ9H1H1 148 aa7.16□□□□□ -1.26
CTNND1-205ENST00000399050 CYSLTR1Q9Y271 337 aa7.16□□□□□ -1.26
CTNND1-205ENST00000399050 GAGE12BA1L429 117 aa7.16□□□□□ -1.26
CTNND1-205ENST00000399050 SYS1-DBNDD2H3BUS1 97 aa7.16□□□□□ -1.26
CTNND1-205ENST00000399050 BCL6BQ8N143 479 aaPredicted RBP7.16□□□□□ -1.26
CTNND1-205ENST00000399050 IMMP1LQ96LU5 166 aa7.16□□□□□ -1.26
CTNND1-205ENST00000399050 MRPL27Q9P0M9 148 aaKnown RBP7.16□□□□□ -1.26
CTNND1-205ENST00000399050 E9PQ18 207 aa7.16□□□□□ -1.26
CTNND1-205ENST00000399050 IGHV2-5P01817 119 aa7.16□□□□□ -1.26
CTNND1-205ENST00000399050 CLPSP04118 112 aa7.16□□□□□ -1.26
CTNND1-205ENST00000399050 TMPRSS3P57727 454 aa7.16□□□□□ -1.26
CTNND1-205ENST00000399050 C8orf46Q8TAG6 207 aa7.16□□□□□ -1.26
CTNND1-205ENST00000399050 LY96Q9Y6Y9 160 aa7.16□□□□□ -1.26
CTNND1-205ENST00000399050 TRAV2A0A0B4J234 112 aa7.15□□□□□ -1.26
CTNND1-205ENST00000399050 A0A1B0GUS0 222 aa7.15□□□□□ -1.26
CTNND1-205ENST00000399050 D6R8Y8 96 aa7.15□□□□□ -1.26
CTNND1-205ENST00000399050 CCL3L1P16619 93 aa7.15□□□□□ -1.26
CTNND1-205ENST00000399050 CLEC19AQ6UXS0 136 aa7.15□□□□□ -1.26
CTNND1-205ENST00000399050 TRGV3P03979 118 aa7.15□□□□□ -1.26
CTNND1-205ENST00000399050 FXYD7P58549 80 aa7.15□□□□□ -1.26
CTNND1-205ENST00000399050 ZFAND6Q6FIF0 208 aa7.15□□□□□ -1.26
CTNND1-205ENST00000399050 ASCL2Q99929 193 aa7.15□□□□□ -1.26
CTNND1-205ENST00000399050 RNF115Q9Y4L5 304 aa7.15□□□□□ -1.26
CTNND1-205ENST00000399050 H7C1H1 209 aa7.15□□□□□ -1.26
CTNND1-205ENST00000399050 PPBPP02775 128 aa7.15□□□□□ -1.26
CTNND1-205ENST00000399050 PAX2Q02962 417 aa7.15□□□□□ -1.26
CTNND1-205ENST00000399050 KIR3DS1Q14943 382 aa7.15□□□□□ -1.26
CTNND1-205ENST00000399050 PVRIGQ6DKI7 326 aa7.15□□□□□ -1.26
CTNND1-205ENST00000399050 ZIC4Q8N9L1 334 aa7.15□□□□□ -1.26
CTNND1-205ENST00000399050 VWCEQ96DN2 955 aa7.15□□□□□ -1.26
CTNND1-205ENST00000399050 TSC2P49815 1807 aa7.15□□□□□ -1.26
CTNND1-205ENST00000399050 RALGAPA1Q6GYQ0 2036 aa7.15□□□□□ -1.27
CTNND1-205ENST00000399050 TRAV12-3A0A0B4J271 114 aa7.15□□□□□ -1.27
CTNND1-205ENST00000399050 H3BRM9 83 aa7.15□□□□□ -1.27
CTNND1-205ENST00000399050 NPSP0C0P6 89 aa7.15□□□□□ -1.27
CTNND1-205ENST00000399050 PPP1R27Q86WC6 154 aa7.15□□□□□ -1.27
CTNND1-205ENST00000399050 RNF125Q96EQ8 232 aa7.15□□□□□ -1.27
CTNND1-205ENST00000399050 PGPEP1Q9NXJ5 209 aa7.15□□□□□ -1.27
CTNND1-205ENST00000399050 A0A0G2JRQ6 117 aa7.15□□□□□ -1.27
CTNND1-205ENST00000399050 PRB3Q04118 309 aaPredicted RBP7.15□□□□□ -1.27
CTNND1-205ENST00000399050 IGLV3-12A0A075B6K2 115 aa7.14□□□□□ -1.27
CTNND1-205ENST00000399050 IGHV3OR16-10A0A075B7F0 116 aa7.14□□□□□ -1.27
CTNND1-205ENST00000399050 DPM3Q9P2X0 92 aa7.14□□□□□ -1.27
CTNND1-205ENST00000399050 CACNA1IQ9P0X4 2223 aa7.14□□□□□ -1.27
CTNND1-205ENST00000399050 C9orf172C9J069 976 aa7.14□□□□□ -1.27
CTNND1-205ENST00000399050 NTF4P34130 210 aa7.14□□□□□ -1.27
CTNND1-205ENST00000399050 CASP8AP2Q9UKL3 1982 aa7.14□□□□□ -1.27
CTNND1-205ENST00000399050 TRAV3A0A0B4J244 114 aa7.14□□□□□ -1.27
CTNND1-205ENST00000399050 B9A039 149 aa7.14□□□□□ -1.27
CTNND1-205ENST00000399050 LILRA1O75019 489 aa7.14□□□□□ -1.27
CTNND1-205ENST00000399050 PAX1P15863 534 aa7.14□□□□□ -1.27
CTNND1-205ENST00000399050 FAM27E3Q08E93 113 aa7.14□□□□□ -1.27
CTNND1-205ENST00000399050 MRPL14Q6P1L8 145 aaKnown RBP7.14□□□□□ -1.27
CTNND1-205ENST00000399050 KIR3DL3Q8N743 410 aa7.14□□□□□ -1.27
CTNND1-205ENST00000399050 TMEM101Q96IK0 257 aa7.14□□□□□ -1.27
CTNND1-205ENST00000399050 C20orf144Q9BQM9 153 aa7.14□□□□□ -1.27
CTNND1-205ENST00000399050 MCRIP2Q9BUT9 160 aaKnown RBP7.14□□□□□ -1.27
CTNND1-205ENST00000399050 SEC16AO15027 2179 aa7.14□□□□□ -1.27
CTNND1-205ENST00000399050 PLXNA3P51805 1871 aa7.14□□□□□ -1.27
CTNND1-205ENST00000399050 NCR2O95944 276 aa7.14□□□□□ -1.27
CTNND1-205ENST00000399050 FHL1Q13642 323 aa7.14□□□□□ -1.27
CTNND1-205ENST00000399050 LAGE3Q14657 143 aa7.14□□□□□ -1.27
CTNND1-205ENST00000399050 MESP1Q9BRJ9 268 aa7.14□□□□□ -1.27
CTNND1-205ENST00000399050 WDR90Q96KV7 1748 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms